| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is egl2 [H]
Identifier: 21243255
GI number: 21243255
Start: 2954354
End: 2956114
Strand: Reverse
Name: egl2 [H]
Synonym: XAC2522
Alternate gene names: 21243255
Gene position: 2956114-2954354 (Counterclockwise)
Preceding gene: 21243256
Following gene: 21243253
Centisome position: 57.12
GC content: 65.47
Gene sequence:
>1761_bases ATGACTATCTTCAAGACTCTGCTCACCAGCCTGATGGTCGTTTCGCCAGTGCTCGCCTGCGCTGCCGAGACGCCCGGCAG GCAGGAGGCCATGGCGGCCAGCGACGCCATCCACGTCAACCAGCTGGGCTATCTGCCGGGCTCGGCAAAACTGGCGATCG TCGGGCTGCCGCCGCAGGGCGCCGCGAACCGTTCGGACCGCTTCACGGTCGAAGATGCACAGGGACGCAGCGTGTTGCAG GGAATCCTGCAGCCGGCCGCGCTGTGGTCGCCGGCCGGTCAGCAGGCGCGGGTGGCGGATTTTTCCGGGCTGCGTGCGGC CGGGACCTATCGGTTGAAGGTCGACGGGCTGCCGGCATCGGAAACCTTCGCCATCAACGCGCATGCCTACCAGCCCCTGG TCGATGCAGCGTTGAAGGCGTTCTACTTCAACCGTGCCAGCACCGCACTGCCGGCACGCTACGCCGGGCGCTATGCGCGC GCGGCCGGGCACCCGGATACGCAGGTGCGCATCCATCGGTCCGCAGCGTCTGCGACGCGTCCAACCGATAGCGTGATCAG CGCGCCCAAAGGTTGGTACGACGCGGGCGACTACAACAAGTACGTCGTCAATTCCGGCATCAGCACCTACACCTTGCTGG CGGCCTACGAGCAGTATCCGGCGTTCTTCAAATCCAAACCGTTGACCATCCCCGACGATGTGCCCGGCGTGCCCGGCATC CTGCAGGAGGCCTGGTGGAATCTGGACTGGATGCTCGCCATGCAGGACCCGGCCGATGGCGGCGTGTACCACAAGCTCAC CGACAAGCAGTTCGATGGCTTGGTGATGCCGGATCAGGCCACGCAGCAGCGCTACGTGGTGATGAAGACGACTGCCGCGA GCTTGGACTTCGCTGCGGTGATGGCCGTGGCCAGCCGCGTGTATGCGCCGTTTGAACAGCAGTATCCGGGTCTGTCGGCG CGCATGTTGAAAGCCTCGCGTGCTGCGTGGGCGTGGGCGAAGCAGCATCCGGATGTGATCTACCAGCAGCCCAGCGACGT GCGCACCGGCGGTTACGACGATGCGCACCTGGACGACGAATTCGCCTGGGCGGCGGCCGAGTTGTACATCGCCACCGGCG AGGATGGGTTCTACGATGCGATGATCGCGCGCAACGTGCCGGCCACCGTGCCGTCGTGGGGCAATGTCGGTGGCCTGGCC TGGATGTCGTTGGCCGGGCATCGCGAGCAACTCACGCCGCATGCCGATCGCGCGCGGATCGCACGGGAGATCACCGGCCT GGCACAGCAGTTGGCCGACACCTGGCAATCATCGGCATGGCGGCTGGCGATGAACGATGGCGATTTCGTGTGGGGCAGCA ACGCAGGGGGGCTCAACCGCGCGATGATGCTGCTACAGGGCTACCGGCTGACGCAGCAGCGGCAATTTCTGGATGCGGCG CAATCGCAGCTGGACTACATCCTGGGCCGCAATCCGCTGGGGCTGTCCTTCGTTACGGGAATAGGCAAACGCACCCCGAT GCATATCCATCACCGCCCCTCCGAGGCCGATGGTATCGAAGCGCCGGTACCGGGTTGGCTGGTCGGCGGCCCGCAGCCGG GGCAGCAGGATGCCAAGGAGTGCAAGGTGCCGTATCCCTCCAAACGGCCGGCGTTGTCGTACCTGGACAACTTCTGCAGC TACTCCACCAACGAGGTGGCGATCAACTGGAATGCGCCGCTGGTGTATGTGAGCGCGGCGATCGAGGCGTCGACGCGCTG A
Upstream 100 bases:
>100_bases ATCCGTGCATCGGGCGCATTACCGCAGCGATGCGGATTGACGCATCGGCTATGCCGGCATTGGACTTGTCGCTGCAAGAT AATGCGGCGACCATCGCGGC
Downstream 100 bases:
>100_bases GGCGGGCGTTTTCAGCGCGACAGAACGCTTGCCTTCTTCCTCCGGGAGAAGGTGGCGCGTAGCGCCGGATGCGGGTACGG CGTCGGCAGGAACACCGACA
Product: cellulase
Products: NA
Alternate protein names: EGD; Cellulase D; Endo-1,4-beta-glucanase [H]
Number of amino acids: Translated: 586; Mature: 585
Protein sequence:
>586_residues MTIFKTLLTSLMVVSPVLACAAETPGRQEAMAASDAIHVNQLGYLPGSAKLAIVGLPPQGAANRSDRFTVEDAQGRSVLQ GILQPAALWSPAGQQARVADFSGLRAAGTYRLKVDGLPASETFAINAHAYQPLVDAALKAFYFNRASTALPARYAGRYAR AAGHPDTQVRIHRSAASATRPTDSVISAPKGWYDAGDYNKYVVNSGISTYTLLAAYEQYPAFFKSKPLTIPDDVPGVPGI LQEAWWNLDWMLAMQDPADGGVYHKLTDKQFDGLVMPDQATQQRYVVMKTTAASLDFAAVMAVASRVYAPFEQQYPGLSA RMLKASRAAWAWAKQHPDVIYQQPSDVRTGGYDDAHLDDEFAWAAAELYIATGEDGFYDAMIARNVPATVPSWGNVGGLA WMSLAGHREQLTPHADRARIAREITGLAQQLADTWQSSAWRLAMNDGDFVWGSNAGGLNRAMMLLQGYRLTQQRQFLDAA QSQLDYILGRNPLGLSFVTGIGKRTPMHIHHRPSEADGIEAPVPGWLVGGPQPGQQDAKECKVPYPSKRPALSYLDNFCS YSTNEVAINWNAPLVYVSAAIEASTR
Sequences:
>Translated_586_residues MTIFKTLLTSLMVVSPVLACAAETPGRQEAMAASDAIHVNQLGYLPGSAKLAIVGLPPQGAANRSDRFTVEDAQGRSVLQ GILQPAALWSPAGQQARVADFSGLRAAGTYRLKVDGLPASETFAINAHAYQPLVDAALKAFYFNRASTALPARYAGRYAR AAGHPDTQVRIHRSAASATRPTDSVISAPKGWYDAGDYNKYVVNSGISTYTLLAAYEQYPAFFKSKPLTIPDDVPGVPGI LQEAWWNLDWMLAMQDPADGGVYHKLTDKQFDGLVMPDQATQQRYVVMKTTAASLDFAAVMAVASRVYAPFEQQYPGLSA RMLKASRAAWAWAKQHPDVIYQQPSDVRTGGYDDAHLDDEFAWAAAELYIATGEDGFYDAMIARNVPATVPSWGNVGGLA WMSLAGHREQLTPHADRARIAREITGLAQQLADTWQSSAWRLAMNDGDFVWGSNAGGLNRAMMLLQGYRLTQQRQFLDAA QSQLDYILGRNPLGLSFVTGIGKRTPMHIHHRPSEADGIEAPVPGWLVGGPQPGQQDAKECKVPYPSKRPALSYLDNFCS YSTNEVAINWNAPLVYVSAAIEASTR >Mature_585_residues TIFKTLLTSLMVVSPVLACAAETPGRQEAMAASDAIHVNQLGYLPGSAKLAIVGLPPQGAANRSDRFTVEDAQGRSVLQG ILQPAALWSPAGQQARVADFSGLRAAGTYRLKVDGLPASETFAINAHAYQPLVDAALKAFYFNRASTALPARYAGRYARA AGHPDTQVRIHRSAASATRPTDSVISAPKGWYDAGDYNKYVVNSGISTYTLLAAYEQYPAFFKSKPLTIPDDVPGVPGIL QEAWWNLDWMLAMQDPADGGVYHKLTDKQFDGLVMPDQATQQRYVVMKTTAASLDFAAVMAVASRVYAPFEQQYPGLSAR MLKASRAAWAWAKQHPDVIYQQPSDVRTGGYDDAHLDDEFAWAAAELYIATGEDGFYDAMIARNVPATVPSWGNVGGLAW MSLAGHREQLTPHADRARIAREITGLAQQLADTWQSSAWRLAMNDGDFVWGSNAGGLNRAMMLLQGYRLTQQRQFLDAAQ SQLDYILGRNPLGLSFVTGIGKRTPMHIHHRPSEADGIEAPVPGWLVGGPQPGQQDAKECKVPYPSKRPALSYLDNFCSY STNEVAINWNAPLVYVSAAIEASTR
Specific function: This enzyme catalyzes the endohydrolysis of 1,4-beta- glucosidic linkages in cellulose, lichenin and cereal beta-D- glucans [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 9 (cellulase E) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR012341 - InterPro: IPR016134 - InterPro: IPR002105 - InterPro: IPR018242 - InterPro: IPR001701 - InterPro: IPR018221 - InterPro: IPR004197 - InterPro: IPR013783 - InterPro: IPR014756 [H]
Pfam domain/function: PF02927 CelD_N; PF00404 Dockerin_1; PF00759 Glyco_hydro_9 [H]
EC number: =3.2.1.4 [H]
Molecular weight: Translated: 63715; Mature: 63584
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: PS00592 GLYCOSYL_HYDROL_F9_1 ; PS00698 GLYCOSYL_HYDROL_F9_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIFKTLLTSLMVVSPVLACAAETPGRQEAMAASDAIHVNQLGYLPGSAKLAIVGLPPQG CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCEEEHHCCCCCCCCEEEEEECCCCC AANRSDRFTVEDAQGRSVLQGILQPAALWSPAGQQARVADFSGLRAAGTYRLKVDGLPAS CCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCCEECCEEEEEECCCCCC ETFAINAHAYQPLVDAALKAFYFNRASTALPARYAGRYARAAGHPDTQVRIHRSAASATR CEEEEECHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCC PTDSVISAPKGWYDAGDYNKYVVNSGISTYTLLAAYEQYPAFFKSKPLTIPDDVPGVPGI CCHHHHCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH LQEAWWNLDWMLAMQDPADGGVYHKLTDKQFDGLVMPDQATQQRYVVMKTTAASLDFAAV HHHHHCCCEEEEEECCCCCCCCEEEECCCCCCCEECCCCCCCCEEEEEEECCCHHHHHHH MAVASRVYAPFEQQYPGLSARMLKASRAAWAWAKQHPDVIYQQPSDVRTGGYDDAHLDDE HHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCH FAWAAAELYIATGEDGFYDAMIARNVPATVPSWGNVGGLAWMSLAGHREQLTPHADRARI HHEEEEEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHCCCCHHHHHH AREITGLAQQLADTWQSSAWRLAMNDGDFVWGSNAGGLNRAMMLLQGYRLTQQRQFLDAA HHHHHHHHHHHHHHHHCCCEEEEECCCCEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHH QSQLDYILGRNPLGLSFVTGIGKRTPMHIHHRPSEADGIEAPVPGWLVGGPQPGQQDAKE HHHHHHHHCCCCCCHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCEECCCCCCCHHHHHH CKVPYPSKRPALSYLDNFCSYSTNEVAINWNAPLVYVSAAIEASTR CCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCEEEEEEEECCCCC >Mature Secondary Structure TIFKTLLTSLMVVSPVLACAAETPGRQEAMAASDAIHVNQLGYLPGSAKLAIVGLPPQG CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCEEEHHCCCCCCCCEEEEEECCCCC AANRSDRFTVEDAQGRSVLQGILQPAALWSPAGQQARVADFSGLRAAGTYRLKVDGLPAS CCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCCEECCEEEEEECCCCCC ETFAINAHAYQPLVDAALKAFYFNRASTALPARYAGRYARAAGHPDTQVRIHRSAASATR CEEEEECHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCC PTDSVISAPKGWYDAGDYNKYVVNSGISTYTLLAAYEQYPAFFKSKPLTIPDDVPGVPGI CCHHHHCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH LQEAWWNLDWMLAMQDPADGGVYHKLTDKQFDGLVMPDQATQQRYVVMKTTAASLDFAAV HHHHHCCCEEEEEECCCCCCCCEEEECCCCCCCEECCCCCCCCEEEEEEECCCHHHHHHH MAVASRVYAPFEQQYPGLSARMLKASRAAWAWAKQHPDVIYQQPSDVRTGGYDDAHLDDE HHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCH FAWAAAELYIATGEDGFYDAMIARNVPATVPSWGNVGGLAWMSLAGHREQLTPHADRARI HHEEEEEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHCCCCHHHHHH AREITGLAQQLADTWQSSAWRLAMNDGDFVWGSNAGGLNRAMMLLQGYRLTQQRQFLDAA HHHHHHHHHHHHHHHHCCCEEEEECCCCEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHH QSQLDYILGRNPLGLSFVTGIGKRTPMHIHHRPSEADGIEAPVPGWLVGGPQPGQQDAKE HHHHHHHHCCCCCCHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCEECCCCCCCHHHHHH CKVPYPSKRPALSYLDNFCSYSTNEVAINWNAPLVYVSAAIEASTR CCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3024110 [H]