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The map label for this gene is cirA [C]

Identifier: 21243253

GI number: 21243253

Start: 2950635

End: 2953151

Strand: Reverse

Name: cirA [C]

Synonym: XAC2520

Alternate gene names: 21243253

Gene position: 2953151-2950635 (Counterclockwise)

Preceding gene: 21243255

Following gene: 21243252

Centisome position: 57.06

GC content: 63.45

Gene sequence:

>2517_bases
TTGGCTGCGGCCACGTGGAGTCCGCTGGCGCATGCGGCCGAGGGTGCGGCCACTGGCGGCGCCGCCAGCGCTGCGGCAAT
CGACCTGGAGCGGCTGGAGGTGCGCCCGCAGCTGGAAGCGCAGGAGCGCGCAGTCGATCTCAAGCGTGCCTCCGATGCCA
TCCAGGATGCCGTCGCCTCCGATGCGATGGGACGTTATCCGGACAAGAATGTTGCAGAATCCTTGCAGCGCCTGCCCGGC
GTCAGCGTCACGCGCGACCAGGGCGAAGGCCGCTTCGTGGTCATCCGCGGCCTGGATTCGTCGCTCAACAGCGTCACCAT
CGACGGCATGACCATGGGCACGCCGGAAGACGGCACGCGCTCGGCACCGCTGGACGTGATTCCCTCCGATTCCACCGAGC
GCCTGAAGGTGGTCAAGTCGCCGACCCCGGACATGCCGGGCGATTCCATCGGCGGGGCGATCCAGGTGGAATCCACCTCC
GCCTTCGATCGCGACGGACGCACGTTGCGCGGCTCCATCGAAGCCAGCCACCAATCGCTGTCGGGCAAGACCAGCCCGAA
GGGCGCGTTCAACTACAGCGACATCTTCAATGGCACCTTCGGGGTGGCGGTGGGTGCGAACTACCAGGACCGCGAGTTCG
AATCGGACAATACCGAAGTGGCCTACGACACCTTCGACGGCGGCGCGGACGACGATCTGTTCGCCGGCGAAGTGCAGCGC
CGCAAATACTTCATCGAACGCACCCGCATGGGTGCGAACCTCAATCTGGACTGGCGCCCGGACGCGGATAACCGCTACTA
CCTGCGCACGCTCTACAGCCGCTTCGACGATGCCGAAACGCGTCAGCGCACCATCTTCGGTTTGAGCGATGGCGAGGTCA
GTGCCAATGGCGACGGCACCTATACCGTGGCCAACCTGCCGGCCGACAGCATTTCCAAGCGCGTGCGCTACCGCACCAAG
AAGGAAGACACCATGGCATTGAGCGTGGGCGGCGAAAACCGCCTGAGCGCTGCCACCGTGGATTACAAGCTGGGCTACAC
CAAGACCCGCGAACGCGTGAACGATGAAAAGGAAGCGCGCTTCAATTACGACGGCGACGATCTGGCGGCCACGGTGGATC
AGCGCAGTGGCATTCCGAAGCTGGGCTTTTCCGACAACGGTTGGCAGAGCAACGATGATTTCGTATTCGATCGCTTCGTG
ATTGCGCCCACGCAGGTGGACGACAGCGAGCGCAGCGCGCAGATCAATGTGCGCTTCGACGGCGAGCGTTCCAGCCTGAA
GATGGGCGTGCTCGGCCGCTGGCGCGAGCGCGGGGTCAACGTGGACGAAAGCGAGCTGCGTCGTGGGCCGGCCATCGACC
TGAGCGACTGGACCACCGCCGCGCCCGAACACCGTGGCGGTACCTTGGGCCAGAGCATTGGCTCGGACGGCATGCGCCGC
TACTGGAACACCTCCGGCGATCTGTACAGTGCGCGCCCGCAAGATGTGGGCGGCAATCTGCAGACCTCGCTGCAGGACGA
TTACACGGCCACCGAAGATGTCTTCGCCACCTATGCGATGGGCACCTGGGACATCGGCGCGCTGCGCATGATCGCCGGCG
TGCGGGTGGAAAATACGCAGTTCAATGCCACCGGCAACCAGGTTGACGTGGCAGCCAATGGCCGCACCGCCACGGTGACG
CCGCGCGAGGCCTCCAGCAGCTACACCAACGTGCTGCCCGGCCTGCATCTGCGTTACGACAGTGGCAATGACTGGGTACT
GCGCTTTGCGGCCAACAAGACTTTGTCGCGCCCGGCGTTCGGCGATGTGTCGCCGCGCGTGAGCATCAACCGTGGCGATA
ACGAGGTGAGTCTGGGCAACCCCGATCTCGATCCGTACCGCTCGCAGAATCTGGACCTGTCGTTCGAAAAATACATCGGC
AGCACCGGCGTGATCTCGCTGGGCGTGTTCCACAAGTCGATCGACGACTACATCGTGCAGATCATCAATACCGATGATGC
GGAATTTCCGGGCCTGCAGGTCACACGCTCGATCAATGGCGACACCGCAAAGGTGCGCGGCGCGGAATTCAATTGGCAGC
AGACCCTGGACTTCCTGCCCGAGGGCTGGAATGGCTTTCTGGTGGGTGCCAGCGCCACGGTGCTGGACAGCGATTTCAAC
CCGGGCCTGGAAAATCGTGCCGGCGATGACTTCACCCTGCCGCGTGCGTCCAAGCGCATCTACAGCGGCCACCTGGGCTA
CGAAAAATACGGGTTCAGCGCGCGCGTGGCGGCGGTGTATCGCAGCCAATATCTGGACACCATCGGGCAGAGCCGTGCGT
ACGATATCTACGTCGCCCCACACACGCAGCTGGATTTCAGCATGAACTATCAATTCAACAGCCACGTCAGCCTGTATCTG
GAAGCGCAGAACCTGCTGGATGAGCCGTTGGAGCTGTATCAGGGCATCCGCTCGCGCACCCTGCAGAATGAAGAGTACGG
CCGCACCTACGCGCTTGGCCTGAAGGTGGCGCTGTGA

Upstream 100 bases:

>100_bases
AGTGAAACGTCGTAGACATAGTGTGCCCACCCATTCTTAACCGATTGGGGAAGCACCCGTGTAGAACAAGACTCCGCTCT
GCCTGGCGATCACGCTGACG

Downstream 100 bases:

>100_bases
TCGCACCACGCACCTTCGTGCAGATCACGCTGCTGTCCGCCGCCGCATTGGTCGGTTGCGCCAGCGCCCCGGCCGGCCGC
GAAGCCGACGAAGCGCTGCT

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NB-Dependent Receptor Subfamily; NB-Dependent Outer Membrane Receptor; Nb-Dependent Receptor; NB-Dependent Receptor Plug; Nb-Dependent Outer Membrane Receptor Protein; Outer Membrane Protein; NB-Dependent Outer Membrane Receptor Protein; Outer Membrane Insertion C-Terminal Signal; NB Dependent Receptor; NB-Dependent Receptor Subfamily Protein; NB Dependent Receptor Protein; NB-Dependent Receptor Domain Protein; Crossover Junction Endodeoxyribonuclease RuvC; NB-Dependent Outer Membrane Fe Receptor Protein; NB-Dependent Maltose Outer Membrane Transporter MalA; NB-Dependent Receptor-Like Protein; NB Dependent Receptor For Iron Chelates; NB-Dependent Receptor Protein; NB-Dependent Outer Membrane Ferripyoverdine Receptor; NB Dependent Receptor-Related Protein; Ferrienterochelin/Colicin Outer Membrane Receptor; Exported nB-Dependent Receptor; Nucleoside Diphosphate Kinase; Peptidase; Outer Membrane Receptor Family Protein; 1-(5-Phosphoribosyl)-5-; Argininosuccinate Synthase

Number of amino acids: Translated: 838; Mature: 837

Protein sequence:

>838_residues
MAAATWSPLAHAAEGAATGGAASAAAIDLERLEVRPQLEAQERAVDLKRASDAIQDAVASDAMGRYPDKNVAESLQRLPG
VSVTRDQGEGRFVVIRGLDSSLNSVTIDGMTMGTPEDGTRSAPLDVIPSDSTERLKVVKSPTPDMPGDSIGGAIQVESTS
AFDRDGRTLRGSIEASHQSLSGKTSPKGAFNYSDIFNGTFGVAVGANYQDREFESDNTEVAYDTFDGGADDDLFAGEVQR
RKYFIERTRMGANLNLDWRPDADNRYYLRTLYSRFDDAETRQRTIFGLSDGEVSANGDGTYTVANLPADSISKRVRYRTK
KEDTMALSVGGENRLSAATVDYKLGYTKTRERVNDEKEARFNYDGDDLAATVDQRSGIPKLGFSDNGWQSNDDFVFDRFV
IAPTQVDDSERSAQINVRFDGERSSLKMGVLGRWRERGVNVDESELRRGPAIDLSDWTTAAPEHRGGTLGQSIGSDGMRR
YWNTSGDLYSARPQDVGGNLQTSLQDDYTATEDVFATYAMGTWDIGALRMIAGVRVENTQFNATGNQVDVAANGRTATVT
PREASSSYTNVLPGLHLRYDSGNDWVLRFAANKTLSRPAFGDVSPRVSINRGDNEVSLGNPDLDPYRSQNLDLSFEKYIG
STGVISLGVFHKSIDDYIVQIINTDDAEFPGLQVTRSINGDTAKVRGAEFNWQQTLDFLPEGWNGFLVGASATVLDSDFN
PGLENRAGDDFTLPRASKRIYSGHLGYEKYGFSARVAAVYRSQYLDTIGQSRAYDIYVAPHTQLDFSMNYQFNSHVSLYL
EAQNLLDEPLELYQGIRSRTLQNEEYGRTYALGLKVAL

Sequences:

>Translated_838_residues
MAAATWSPLAHAAEGAATGGAASAAAIDLERLEVRPQLEAQERAVDLKRASDAIQDAVASDAMGRYPDKNVAESLQRLPG
VSVTRDQGEGRFVVIRGLDSSLNSVTIDGMTMGTPEDGTRSAPLDVIPSDSTERLKVVKSPTPDMPGDSIGGAIQVESTS
AFDRDGRTLRGSIEASHQSLSGKTSPKGAFNYSDIFNGTFGVAVGANYQDREFESDNTEVAYDTFDGGADDDLFAGEVQR
RKYFIERTRMGANLNLDWRPDADNRYYLRTLYSRFDDAETRQRTIFGLSDGEVSANGDGTYTVANLPADSISKRVRYRTK
KEDTMALSVGGENRLSAATVDYKLGYTKTRERVNDEKEARFNYDGDDLAATVDQRSGIPKLGFSDNGWQSNDDFVFDRFV
IAPTQVDDSERSAQINVRFDGERSSLKMGVLGRWRERGVNVDESELRRGPAIDLSDWTTAAPEHRGGTLGQSIGSDGMRR
YWNTSGDLYSARPQDVGGNLQTSLQDDYTATEDVFATYAMGTWDIGALRMIAGVRVENTQFNATGNQVDVAANGRTATVT
PREASSSYTNVLPGLHLRYDSGNDWVLRFAANKTLSRPAFGDVSPRVSINRGDNEVSLGNPDLDPYRSQNLDLSFEKYIG
STGVISLGVFHKSIDDYIVQIINTDDAEFPGLQVTRSINGDTAKVRGAEFNWQQTLDFLPEGWNGFLVGASATVLDSDFN
PGLENRAGDDFTLPRASKRIYSGHLGYEKYGFSARVAAVYRSQYLDTIGQSRAYDIYVAPHTQLDFSMNYQFNSHVSLYL
EAQNLLDEPLELYQGIRSRTLQNEEYGRTYALGLKVAL
>Mature_837_residues
AAATWSPLAHAAEGAATGGAASAAAIDLERLEVRPQLEAQERAVDLKRASDAIQDAVASDAMGRYPDKNVAESLQRLPGV
SVTRDQGEGRFVVIRGLDSSLNSVTIDGMTMGTPEDGTRSAPLDVIPSDSTERLKVVKSPTPDMPGDSIGGAIQVESTSA
FDRDGRTLRGSIEASHQSLSGKTSPKGAFNYSDIFNGTFGVAVGANYQDREFESDNTEVAYDTFDGGADDDLFAGEVQRR
KYFIERTRMGANLNLDWRPDADNRYYLRTLYSRFDDAETRQRTIFGLSDGEVSANGDGTYTVANLPADSISKRVRYRTKK
EDTMALSVGGENRLSAATVDYKLGYTKTRERVNDEKEARFNYDGDDLAATVDQRSGIPKLGFSDNGWQSNDDFVFDRFVI
APTQVDDSERSAQINVRFDGERSSLKMGVLGRWRERGVNVDESELRRGPAIDLSDWTTAAPEHRGGTLGQSIGSDGMRRY
WNTSGDLYSARPQDVGGNLQTSLQDDYTATEDVFATYAMGTWDIGALRMIAGVRVENTQFNATGNQVDVAANGRTATVTP
REASSSYTNVLPGLHLRYDSGNDWVLRFAANKTLSRPAFGDVSPRVSINRGDNEVSLGNPDLDPYRSQNLDLSFEKYIGS
TGVISLGVFHKSIDDYIVQIINTDDAEFPGLQVTRSINGDTAKVRGAEFNWQQTLDFLPEGWNGFLVGASATVLDSDFNP
GLENRAGDDFTLPRASKRIYSGHLGYEKYGFSARVAAVYRSQYLDTIGQSRAYDIYVAPHTQLDFSMNYQFNSHVSLYLE
AQNLLDEPLELYQGIRSRTLQNEEYGRTYALGLKVAL

Specific function: Not Yet Known. Postulated To Participate In Iron Transport. Outer Membrane Receptor For Colicins Ia And Ib. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788478, Length=265, Percent_Identity=24.1509433962264, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 92082; Mature: 91951

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAATWSPLAHAAEGAATGGAASAAAIDLERLEVRPQLEAQERAVDLKRASDAIQDAVAS
CCCCCCCHHHHHHCCCCCCCCCHHHEEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
DAMGRYPDKNVAESLQRLPGVSVTRDQGEGRFVVIRGLDSSLNSVTIDGMTMGTPEDGTR
HHCCCCCCHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCCCCEEEECCEEECCCCCCCC
SAPLDVIPSDSTERLKVVKSPTPDMPGDSIGGAIQVESTSAFDRDGRTLRGSIEASHQSL
CCCCEECCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCEEEECHHHHHHHC
SGKTSPKGAFNYSDIFNGTFGVAVGANYQDREFESDNTEVAYDTFDGGADDDLFAGEVQR
CCCCCCCCCCCHHHHCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHH
RKYFIERTRMGANLNLDWRPDADNRYYLRTLYSRFDDAETRQRTIFGLSDGEVSANGDGT
HHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCEEECCCCCE
YTVANLPADSISKRVRYRTKKEDTMALSVGGENRLSAATVDYKLGYTKTRERVNDEKEAR
EEEEECCHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEEEECCCHHHHHHCCCCHHHC
FNYDGDDLAATVDQRSGIPKLGFSDNGWQSNDDFVFDRFVIAPTQVDDSERSAQINVRFD
CCCCCHHHEEEHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEEEEC
GERSSLKMGVLGRWRERGVNVDESELRRGPAIDLSDWTTAAPEHRGGTLGQSIGSDGMRR
CCCCCEEECHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHH
YWNTSGDLYSARPQDVGGNLQTSLQDDYTATEDVFATYAMGTWDIGALRMIAGVRVENTQ
HHCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHEEEECCCCCHHHHHHHHCEEEECCE
FNATGNQVDVAANGRTATVTPREASSSYTNVLPGLHLRYDSGNDWVLRFAANKTLSRPAF
ECCCCCEEEEEECCEEEEECCCCCCCCHHHCCCCEEEEECCCCCEEEEEECCCCCCCCCC
GDVSPRVSINRGDNEVSLGNPDLDPYRSQNLDLSFEKYIGSTGVISLGVFHKSIDDYIVQ
CCCCCCEEEECCCCEEECCCCCCCCCCCCCCCEEHHHHCCCCCEEEEHHHHHHHHHHEEE
IINTDDAEFPGLQVTRSINGDTAKVRGAEFNWQQTLDFLPEGWNGFLVGASATVLDSDFN
EECCCCCCCCCEEEEEECCCCEEEEECCCCCHHHHHHCCCCCCCEEEEECEEEEEECCCC
PGLENRAGDDFTLPRASKRIYSGHLGYEKYGFSARVAAVYRSQYLDTIGQSRAYDIYVAP
CCCCCCCCCCCCCCHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEECC
HTQLDFSMNYQFNSHVSLYLEAQNLLDEPLELYQGIRSRTLQNEEYGRTYALGLKVAL
CCEEEEEEEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEC
>Mature Secondary Structure 
AAATWSPLAHAAEGAATGGAASAAAIDLERLEVRPQLEAQERAVDLKRASDAIQDAVAS
CCCCCCHHHHHHCCCCCCCCCHHHEEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
DAMGRYPDKNVAESLQRLPGVSVTRDQGEGRFVVIRGLDSSLNSVTIDGMTMGTPEDGTR
HHCCCCCCHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCCCCEEEECCEEECCCCCCCC
SAPLDVIPSDSTERLKVVKSPTPDMPGDSIGGAIQVESTSAFDRDGRTLRGSIEASHQSL
CCCCEECCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCEEEECHHHHHHHC
SGKTSPKGAFNYSDIFNGTFGVAVGANYQDREFESDNTEVAYDTFDGGADDDLFAGEVQR
CCCCCCCCCCCHHHHCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHH
RKYFIERTRMGANLNLDWRPDADNRYYLRTLYSRFDDAETRQRTIFGLSDGEVSANGDGT
HHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCEEECCCCCE
YTVANLPADSISKRVRYRTKKEDTMALSVGGENRLSAATVDYKLGYTKTRERVNDEKEAR
EEEEECCHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEEEECCCHHHHHHCCCCHHHC
FNYDGDDLAATVDQRSGIPKLGFSDNGWQSNDDFVFDRFVIAPTQVDDSERSAQINVRFD
CCCCCHHHEEEHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEEEEC
GERSSLKMGVLGRWRERGVNVDESELRRGPAIDLSDWTTAAPEHRGGTLGQSIGSDGMRR
CCCCCEEECHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHH
YWNTSGDLYSARPQDVGGNLQTSLQDDYTATEDVFATYAMGTWDIGALRMIAGVRVENTQ
HHCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHEEEECCCCCHHHHHHHHCEEEECCE
FNATGNQVDVAANGRTATVTPREASSSYTNVLPGLHLRYDSGNDWVLRFAANKTLSRPAF
ECCCCCEEEEEECCEEEEECCCCCCCCHHHCCCCEEEEECCCCCEEEEEECCCCCCCCCC
GDVSPRVSINRGDNEVSLGNPDLDPYRSQNLDLSFEKYIGSTGVISLGVFHKSIDDYIVQ
CCCCCCEEEECCCCEEECCCCCCCCCCCCCCCEEHHHHCCCCCEEEEHHHHHHHHHHEEE
IINTDDAEFPGLQVTRSINGDTAKVRGAEFNWQQTLDFLPEGWNGFLVGASATVLDSDFN
EECCCCCCCCCEEEEEECCCCEEEEECCCCCHHHHHHCCCCCCCEEEEECEEEEEECCCC
PGLENRAGDDFTLPRASKRIYSGHLGYEKYGFSARVAAVYRSQYLDTIGQSRAYDIYVAP
CCCCCCCCCCCCCCHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEECC
HTQLDFSMNYQFNSHVSLYLEAQNLLDEPLELYQGIRSRTLQNEEYGRTYALGLKVAL
CCEEEEEEEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA