| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21242917
Identifier: 21242917
GI number: 21242917
Start: 2552564
End: 2553190
Strand: Reverse
Name: 21242917
Synonym: XAC2182
Alternate gene names: NA
Gene position: 2553190-2552564 (Counterclockwise)
Preceding gene: 21242918
Following gene: 21242916
Centisome position: 49.33
GC content: 67.15
Gene sequence:
>627_bases GTGGTCCGCAGCCTGCAGGTCGGGGAGGGCATGCCACTGCATGTCGGGGGACGCTTCGCGCTGGCCTTGCAAGGGCACGA GCACTACTTGCGGCTGGGCGATGCAGGGACGATCACGCTTTACGGGCCGGTGCCGCCGCCGGGCTGGGTCGGCAAGCTGT CCATGGAGCAGCGCTTCGAGTACCAGGGCAAGGGGCCATTCGATCTGCCGGCCGTGTCCTTCACGGCGGAAGTCTCCGAG ACGGCACTATCCAAGGTGGGTCTGGCCCTGCATTCCGCTGCACCTGGTGTCGATGCCTTGGTCTGCTCGACGCCCGAGCG GGCCATGCTGGAGTTGTGCGATGGCGTATCGGATGCGGCTGGGGTCTACGAGACCGATGCGCTGATGCAGGCCATGACCA CACTGCGACCACAGCGCGTCGCTCTGCTGCTGCGCCACTGCGGCAGCATCAAGGCCAAGCGGCTGTTCCTGGCGCTGGCC GATCGCCATCGGCATGCGTGGCTGGCGCATGTGCCGTTGGATGGCGTCGATCTGGGCGGGGGCAAGCGTGCGCTGGTGCC CGGCGGGCGCCTGCATCCGACCTACCAGATCACCTTGCCAGGAGACCTCGATGAGCACCTGGCTTGA
Upstream 100 bases:
>100_bases CTCCAACAGCCTGGTTGCGCGCTATGTGGGCAGCGGCTGGCTGGTGTCGCCGGCGCGTGGCGTGTACATGCGCGCTGGCG GGCGGCTGCAATGGGATGGG
Downstream 100 bases:
>100_bases TCGGTGGGACCGGCGCTACACCGACCGAGTGCGGCTGCTGGTCGAGATCCTGCCGGTGCTGGCCCAGGAGCCGCGCTTCG CGCTCAAGGGCGGCACCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MVRSLQVGEGMPLHVGGRFALALQGHEHYLRLGDAGTITLYGPVPPPGWVGKLSMEQRFEYQGKGPFDLPAVSFTAEVSE TALSKVGLALHSAAPGVDALVCSTPERAMLELCDGVSDAAGVYETDALMQAMTTLRPQRVALLLRHCGSIKAKRLFLALA DRHRHAWLAHVPLDGVDLGGGKRALVPGGRLHPTYQITLPGDLDEHLA
Sequences:
>Translated_208_residues MVRSLQVGEGMPLHVGGRFALALQGHEHYLRLGDAGTITLYGPVPPPGWVGKLSMEQRFEYQGKGPFDLPAVSFTAEVSE TALSKVGLALHSAAPGVDALVCSTPERAMLELCDGVSDAAGVYETDALMQAMTTLRPQRVALLLRHCGSIKAKRLFLALA DRHRHAWLAHVPLDGVDLGGGKRALVPGGRLHPTYQITLPGDLDEHLA >Mature_208_residues MVRSLQVGEGMPLHVGGRFALALQGHEHYLRLGDAGTITLYGPVPPPGWVGKLSMEQRFEYQGKGPFDLPAVSFTAEVSE TALSKVGLALHSAAPGVDALVCSTPERAMLELCDGVSDAAGVYETDALMQAMTTLRPQRVALLLRHCGSIKAKRLFLALA DRHRHAWLAHVPLDGVDLGGGKRALVPGGRLHPTYQITLPGDLDEHLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22256; Mature: 22256
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRSLQVGEGMPLHVGGRFALALQGHEHYLRLGDAGTITLYGPVPPPGWVGKLSMEQRFE CCCCEECCCCCEEEECCEEEEEEECCCEEEEECCCCEEEEEECCCCCCCCCCCCHHHHHC YQGKGPFDLPAVSFTAEVSETALSKVGLALHSAAPGVDALVCSTPERAMLELCDGVSDAA CCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHCCCCCCC GVYETDALMQAMTTLRPQRVALLLRHCGSIKAKRLFLALADRHRHAWLAHVPLDGVDLGG CCHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCCEECCC GKRALVPGGRLHPTYQITLPGDLDEHLA CCEEECCCCCCCCEEEEEECCCCHHHCC >Mature Secondary Structure MVRSLQVGEGMPLHVGGRFALALQGHEHYLRLGDAGTITLYGPVPPPGWVGKLSMEQRFE CCCCEECCCCCEEEECCEEEEEEECCCEEEEECCCCEEEEEECCCCCCCCCCCCHHHHHC YQGKGPFDLPAVSFTAEVSETALSKVGLALHSAAPGVDALVCSTPERAMLELCDGVSDAA CCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHCCCCCCC GVYETDALMQAMTTLRPQRVALLLRHCGSIKAKRLFLALADRHRHAWLAHVPLDGVDLGG CCHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCCEECCC GKRALVPGGRLHPTYQITLPGDLDEHLA CCEEECCCCCCCCEEEEEECCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA