| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21242916
Identifier: 21242916
GI number: 21242916
Start: 2551636
End: 2552580
Strand: Reverse
Name: 21242916
Synonym: XAC2181
Alternate gene names: NA
Gene position: 2552580-2551636 (Counterclockwise)
Preceding gene: 21242917
Following gene: 21242914
Centisome position: 49.32
GC content: 66.14
Gene sequence:
>945_bases ATGAGCACCTGGCTTGATCGGTGGGACCGGCGCTACACCGACCGAGTGCGGCTGCTGGTCGAGATCCTGCCGGTGCTGGC CCAGGAGCCGCGCTTCGCGCTCAAGGGCGGCACCGCCATCAACCTGTTCGAGCATGACCTGCCGCGTCTGTCGGTGGACA TCGACCTGGCCTGGCTGCCGGTGCACGACTACGCCGAGGATGCGAAGCTGATCGCCGAAGCACTCGGACGACTGGCCGAC GCGATGCGCGCCCGGCCTTTGCAATTGCAGGTGCAGGCCTCGGTGGGCGAGGGTGGGGTGGTTCCGCGGCTAGTAGCCAG TCGCGGCCGAGCGCGTGTGCAGATCGAGACGACGCCGGTGATGCGCGGGACGGTGCATCCGGTGCGAACCATGGTCGTGC GGCCACGGGTGGAGGAGGCGTTCGGCTTCGCCGAAGTCCAGGTGCTGGATTTCGCCGACCTATATGCCGGAAAGCTGGCG GCGGCATTGTCGCGGCAGCATCCGCGCGATCTGTTCGACGTGGGCTTGCTGCTGGAGGATGAGCGGGCGGATGCAGGTCT CTGGCGGACCTTTCTCGTGTACCTGACATGCAGTCCTAAGCCAGCATGGGAAATGCTGGCGCCGCGTGTACCTGCGGATT TCGAGGCCACCTTCGAGGCTCACTTCATGGGCATGACGGCTGAGCCCATTGAAGCGACGGCTTTGTTGGAGAGCCGCGAG CGTCTGTTGGCGCGCGTGGCGCATTGGCTGGACGAGCCGTCGAGCGCCTTTCTGCAATCGGTCGAGGATGAGCAGCCGGA TTTCGGGTTGATCGGTCTTGCCCATGCGGCCGATCTGCCCGGTGTGCGGCGCAAGCTGCACAACCTGGCGCAGCGCACGG TGGCTAAACGCGCTGCGGATCGTGGGCAGTTGACGGACGTGCTGGCGCGCATCAAGGCGCGCTGA
Upstream 100 bases:
>100_bases GTGCCGTTGGATGGCGTCGATCTGGGCGGGGGCAAGCGTGCGCTGGTGCCCGGCGGGCGCCTGCATCCGACCTACCAGAT CACCTTGCCAGGAGACCTCG
Downstream 100 bases:
>100_bases CGCAGCGAGTAATACAAAGGCGATGGGGTGATCGCGATGGCTCACGATTTCACACTGATATATGCGCTGAATCCCGAGTT GGATTCCCCGGATGAGGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MSTWLDRWDRRYTDRVRLLVEILPVLAQEPRFALKGGTAINLFEHDLPRLSVDIDLAWLPVHDYAEDAKLIAEALGRLAD AMRARPLQLQVQASVGEGGVVPRLVASRGRARVQIETTPVMRGTVHPVRTMVVRPRVEEAFGFAEVQVLDFADLYAGKLA AALSRQHPRDLFDVGLLLEDERADAGLWRTFLVYLTCSPKPAWEMLAPRVPADFEATFEAHFMGMTAEPIEATALLESRE RLLARVAHWLDEPSSAFLQSVEDEQPDFGLIGLAHAADLPGVRRKLHNLAQRTVAKRAADRGQLTDVLARIKAR
Sequences:
>Translated_314_residues MSTWLDRWDRRYTDRVRLLVEILPVLAQEPRFALKGGTAINLFEHDLPRLSVDIDLAWLPVHDYAEDAKLIAEALGRLAD AMRARPLQLQVQASVGEGGVVPRLVASRGRARVQIETTPVMRGTVHPVRTMVVRPRVEEAFGFAEVQVLDFADLYAGKLA AALSRQHPRDLFDVGLLLEDERADAGLWRTFLVYLTCSPKPAWEMLAPRVPADFEATFEAHFMGMTAEPIEATALLESRE RLLARVAHWLDEPSSAFLQSVEDEQPDFGLIGLAHAADLPGVRRKLHNLAQRTVAKRAADRGQLTDVLARIKAR >Mature_313_residues STWLDRWDRRYTDRVRLLVEILPVLAQEPRFALKGGTAINLFEHDLPRLSVDIDLAWLPVHDYAEDAKLIAEALGRLADA MRARPLQLQVQASVGEGGVVPRLVASRGRARVQIETTPVMRGTVHPVRTMVVRPRVEEAFGFAEVQVLDFADLYAGKLAA ALSRQHPRDLFDVGLLLEDERADAGLWRTFLVYLTCSPKPAWEMLAPRVPADFEATFEAHFMGMTAEPIEATALLESRER LLARVAHWLDEPSSAFLQSVEDEQPDFGLIGLAHAADLPGVRRKLHNLAQRTVAKRAADRGQLTDVLARIKAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35130; Mature: 34999
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTWLDRWDRRYTDRVRLLVEILPVLAQEPRFALKGGTAINLFEHDLPRLSVDIDLAWLP CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEHHHCCCCCEEEEEEEEEEE VHDYAEDAKLIAEALGRLADAMRARPLQLQVQASVGEGGVVPRLVASRGRARVQIETTPV CHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHCCCCEEEEEEECCC MRGTVHPVRTMVVRPRVEEAFGFAEVQVLDFADLYAGKLAAALSRQHPRDLFDVGLLLED CCCCCHHHHHHHCCCCHHHHCCHHHEEEEHHHHHHHHHHHHHHHHCCCHHHHHHCCEEEC ERADAGLWRTFLVYLTCSPKPAWEMLAPRVPADFEATFEAHFMGMTAEPIEATALLESRE CCCCHHHHEEHHEEEECCCCCHHHHHCCCCCCCCHHHHHHHEECCCCCCHHHHHHHHHHH RLLARVAHWLDEPSSAFLQSVEDEQPDFGLIGLAHAADLPGVRRKLHNLAQRTVAKRAAD HHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHC RGQLTDVLARIKAR CHHHHHHHHHHHCC >Mature Secondary Structure STWLDRWDRRYTDRVRLLVEILPVLAQEPRFALKGGTAINLFEHDLPRLSVDIDLAWLP CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEHHHCCCCCEEEEEEEEEEE VHDYAEDAKLIAEALGRLADAMRARPLQLQVQASVGEGGVVPRLVASRGRARVQIETTPV CHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHCCCCEEEEEEECCC MRGTVHPVRTMVVRPRVEEAFGFAEVQVLDFADLYAGKLAAALSRQHPRDLFDVGLLLED CCCCCHHHHHHHCCCCHHHHCCHHHEEEEHHHHHHHHHHHHHHHHCCCHHHHHHCCEEEC ERADAGLWRTFLVYLTCSPKPAWEMLAPRVPADFEATFEAHFMGMTAEPIEATALLESRE CCCCHHHHEEHHEEEECCCCCHHHHHCCCCCCCCHHHHHHHEECCCCCCHHHHHHHHHHH RLLARVAHWLDEPSSAFLQSVEDEQPDFGLIGLAHAADLPGVRRKLHNLAQRTVAKRAAD HHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHC RGQLTDVLARIKAR CHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA