| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is cheY [H]
Identifier: 21242648
GI number: 21242648
Start: 2228439
End: 2228804
Strand: Reverse
Name: cheY [H]
Synonym: XAC1904
Alternate gene names: 21242648
Gene position: 2228804-2228439 (Counterclockwise)
Preceding gene: 21242649
Following gene: 21242647
Centisome position: 43.06
GC content: 62.57
Gene sequence:
>366_bases ATGAGCGCACGTATCTTGGTGGTGGACGATTCGGCGTCGATGCGCCAGATGGTCTCTTTCGCCCTCACCTCTGCCGGCTT TGCCGTCGAAGAAGCCGAAGACGGCGCCGTTGCGCTGGGCCGCGCGAAGGGCCAGCGCTTCAATGCGGTGGTCACCGACG TGAACATGCCCAACATGGACGGCATCTCGCTGATCCGCGAGCTGCGCCAGCTGCCGGACTACAAGTTCACCCCCATGCTC ATGCTCACCACCGAGTCGGCGGCCGACAAGAAATCCGAAGGCAAGGCCGCCGGCGCCACCGGTTGGCTGGTCAAGCCGTT CAATCCAGAACAGCTGATCGCCACCGTCCAGAAAGTTCTCGGTTAA
Upstream 100 bases:
>100_bases GCAACGACACTTTTAGGGATGCAGCGCGTCTGCTCGGCGTCACCGACGCGCTCGGACTCCCGGCATCCAATGACAACCTG AAATCTGTGGAGAACGCCGC
Downstream 100 bases:
>100_bases ACCCTTCTCGCTTCAGCTTCGGATTTCACGCCCATGAGCATGGACCTGCAACGTTTCCACGCCACCTTTTTCGAGGAAAG CCGTGAAGGGCTCGACGCGA
Product: chemotaxis response regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MSARILVVDDSASMRQMVSFALTSAGFAVEEAEDGAVALGRAKGQRFNAVVTDVNMPNMDGISLIRELRQLPDYKFTPML MLTTESAADKKSEGKAAGATGWLVKPFNPEQLIATVQKVLG
Sequences:
>Translated_121_residues MSARILVVDDSASMRQMVSFALTSAGFAVEEAEDGAVALGRAKGQRFNAVVTDVNMPNMDGISLIRELRQLPDYKFTPML MLTTESAADKKSEGKAAGATGWLVKPFNPEQLIATVQKVLG >Mature_120_residues SARILVVDDSASMRQMVSFALTSAGFAVEEAEDGAVALGRAKGQRFNAVVTDVNMPNMDGISLIRELRQLPDYKFTPMLM LTTESAADKKSEGKAAGATGWLVKPFNPEQLIATVQKVLG
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. CheY is likely to be involved in changing the direction of flagellar rotation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788191, Length=118, Percent_Identity=38.9830508474576, Blast_Score=84, Evalue=2e-18, Organism=Escherichia coli, GI1786599, Length=120, Percent_Identity=33.3333333333333, Blast_Score=77, Evalue=3e-16, Organism=Escherichia coli, GI1788550, Length=117, Percent_Identity=33.3333333333333, Blast_Score=72, Evalue=8e-15, Organism=Escherichia coli, GI1788713, Length=108, Percent_Identity=36.1111111111111, Blast_Score=71, Evalue=2e-14, Organism=Escherichia coli, GI87082012, Length=114, Percent_Identity=30.7017543859649, Blast_Score=69, Evalue=7e-14, Organism=Escherichia coli, GI1790437, Length=117, Percent_Identity=35.042735042735, Blast_Score=68, Evalue=2e-13, Organism=Escherichia coli, GI1787375, Length=117, Percent_Identity=33.3333333333333, Blast_Score=68, Evalue=2e-13, Organism=Escherichia coli, GI1790299, Length=116, Percent_Identity=29.3103448275862, Blast_Score=67, Evalue=4e-13, Organism=Escherichia coli, GI1789149, Length=112, Percent_Identity=30.3571428571429, Blast_Score=65, Evalue=2e-12, Organism=Escherichia coli, GI1789809, Length=117, Percent_Identity=31.6239316239316, Blast_Score=65, Evalue=2e-12, Organism=Escherichia coli, GI1786784, Length=117, Percent_Identity=29.9145299145299, Blast_Score=64, Evalue=2e-12, Organism=Escherichia coli, GI145693157, Length=102, Percent_Identity=36.2745098039216, Blast_Score=63, Evalue=4e-12, Organism=Escherichia coli, GI1790860, Length=116, Percent_Identity=31.0344827586207, Blast_Score=63, Evalue=5e-12, Organism=Escherichia coli, GI1786911, Length=116, Percent_Identity=31.8965517241379, Blast_Score=60, Evalue=4e-11, Organism=Escherichia coli, GI1790552, Length=118, Percent_Identity=30.5084745762712, Blast_Score=60, Evalue=5e-11, Organism=Escherichia coli, GI1790863, Length=119, Percent_Identity=30.2521008403361, Blast_Score=60, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 12991; Mature: 12860
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSARILVVDDSASMRQMVSFALTSAGFAVEEAEDGAVALGRAKGQRFNAVVTDVNMPNMD CCCEEEEEECCHHHHHHHHHHHHHCCCEEECCCCCEEEEECCCCCEEEEEEEECCCCCCC GISLIRELRQLPDYKFTPMLMLTTESAADKKSEGKAAGATGWLVKPFNPEQLIATVQKVL HHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHH G C >Mature Secondary Structure SARILVVDDSASMRQMVSFALTSAGFAVEEAEDGAVALGRAKGQRFNAVVTDVNMPNMD CCEEEEEECCHHHHHHHHHHHHHCCCEEECCCCCEEEEECCCCCEEEEEEEECCCCCCC GISLIRELRQLPDYKFTPMLMLTTESAADKKSEGKAAGATGWLVKPFNPEQLIATVQKVL HHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHH G C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1560774; 10984043; 7860605 [H]