Definition Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome.
Accession NC_003919
Length 5,175,554

Click here to switch to the map view.

The map label for this gene is 21242649

Identifier: 21242649

GI number: 21242649

Start: 2228801

End: 2229109

Strand: Reverse

Name: 21242649

Synonym: XAC1905

Alternate gene names: NA

Gene position: 2229109-2228801 (Counterclockwise)

Preceding gene: 77748621

Following gene: 21242648

Centisome position: 43.07

GC content: 61.81

Gene sequence:

>309_bases
ATGAGCACAGTGACATTGGGTGAGGATCTCGGCATCGAGACCAGCGCCGACCTCAAGCAAAAGCTTGCCGGATTCCTCAC
CCAGGACGGCGACCTGGTGCTTGACGCCGGTGAAGTCCGGCGCATCCACACCGCCAGCGTGCAGTTGCTCTGCGCCTTTG
TGCAAAGCCGCCGCCAGGCCGGCCTGCACACCGAATTCGATGGCTGCAACGACACTTTTAGGGATGCAGCGCGTCTGCTC
GGCGTCACCGACGCGCTCGGACTCCCGGCATCCAATGACAACCTGAAATCTGTGGAGAACGCCGCATGA

Upstream 100 bases:

>100_bases
CGCGCCTAGCTTGCCCGCACCTGCACGCACGACGATTCACCGTTAAAGCTTTTCCGCCCCCCGCCGTTAGTACGCATAGA
ACCATCCGTTCGGAGCAACA

Downstream 100 bases:

>100_bases
GCGCACGTATCTTGGTGGTGGACGATTCGGCGTCGATGCGCCAGATGGTCTCTTTCGCCCTCACCTCTGCCGGCTTTGCC
GTCGAAGAAGCCGAAGACGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 102; Mature: 101

Protein sequence:

>102_residues
MSTVTLGEDLGIETSADLKQKLAGFLTQDGDLVLDAGEVRRIHTASVQLLCAFVQSRRQAGLHTEFDGCNDTFRDAARLL
GVTDALGLPASNDNLKSVENAA

Sequences:

>Translated_102_residues
MSTVTLGEDLGIETSADLKQKLAGFLTQDGDLVLDAGEVRRIHTASVQLLCAFVQSRRQAGLHTEFDGCNDTFRDAARLL
GVTDALGLPASNDNLKSVENAA
>Mature_101_residues
STVTLGEDLGIETSADLKQKLAGFLTQDGDLVLDAGEVRRIHTASVQLLCAFVQSRRQAGLHTEFDGCNDTFRDAARLLG
VTDALGLPASNDNLKSVENAA

Specific function: Unknown

COG id: COG1366

COG function: function code T; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10846; Mature: 10715

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTVTLGEDLGIETSADLKQKLAGFLTQDGDLVLDAGEVRRIHTASVQLLCAFVQSRRQA
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHC
GLHTEFDGCNDTFRDAARLLGVTDALGLPASNDNLKSVENAA
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCC
>Mature Secondary Structure 
STVTLGEDLGIETSADLKQKLAGFLTQDGDLVLDAGEVRRIHTASVQLLCAFVQSRRQA
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHC
GLHTEFDGCNDTFRDAARLLGVTDALGLPASNDNLKSVENAA
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA