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The map label for this gene is tsr [H]

Identifier: 21242641

GI number: 21242641

Start: 2214015

End: 2216318

Strand: Reverse

Name: tsr [H]

Synonym: XAC1897

Alternate gene names: 21242641

Gene position: 2216318-2214015 (Counterclockwise)

Preceding gene: 21242642

Following gene: 21242640

Centisome position: 42.82

GC content: 65.76

Gene sequence:

>2304_bases
GTGGGCTATAACGGCCAGCGCGGCCTGCTCGATGCGATTGCCGCACAGGTCATTTCCTCCGACGCGCTGCGCAACCACAT
GCAGGCGGACATGATGCACGACGCCCTGCGCGGCGATGTCACCGCGGCGTTGCTTGCTGCCTCCACGAAAGACGATAAAG
CGGTTGCAGCCGCACGCACCGCATTGGGGGAACACGCTGGCGAATTCCGCGAGTCGCTGGCAGCCAACCGCAAACTGCCG
CTGGCCCCTGCATTGCGCGGCGAGTTGGACGCGGTGACGCCGGCATTGCAGGCCTATATCGCATCCGCCGACCACGTGGT
GAACGCTGCCGAAACGCATGCGGACAGCGCAGCGGCCTACGCGGATTTCAACGACAAGTTCGGCCAGCTTCAAACCCGCA
TGGGCGCCATCAGCGAGCGCATCCTGGCCTTGAACGAGGCCAGCCGCCGCCAGGCCGAGCAAGACAGCCACCGCGTGATG
TGGCAGCAAGGCAGTGCCGTGGTGCTGGCATTGGTGTGCCTGGCGCTGGCGGCCGGCTGGATCCTGCGCTCGGTGTTCGG
CCTGCTTGGCGGCGAGCCGCAGCTGGCCATGGCGGCCGCGCAGCACATCGCCGAAGGCTGCCTGGATCAACCGATCCCGG
TCGCCGCAAAGCACTCGCGCAGCCTGATGGCCGCCTTGGCGCGCATGCAGCGCGACCTGCGCGAGCGCCTGGAGCGCGAG
CGCAGCATCGCGGCCGAAAACCTGCGCATCCGTACCGCATTGGATAACGCATCCACCGGCATGTACATCGCCGACCCGGA
TCTCACCATCATCTACACCAATGGTGCGCTGCAAGACCTGCTGCACACCTACGCGGACGATATTCAGGCCTGCGCGCCTG
CGTTCCATCGCACGGCCAACCTGGTCGGCCAGCCGGTCTCGCTGCTGGAAGTGGGCAACGCACAGGACGCAGAGATCTAT
CAGCGTCTGGACCGCCAGGGCGCTGCCCAACGCGAGGTGCAGTACCGCAGCACCTGCATCGCACAGAACGTTTCGGCAAT
TCGCGACGAGACCGGCGCGCATCTGGGCTTCGTCTGCGAGTGGCGCGACCGCACGGCCGAGGCGCGCGTGGAAATCGACG
TTGCCGACGTGGTGCGTAGCGCCGCTGCCGGCGATCTTTCCAAGCGCATCGACAGTGCCGGAAAGCAGGGCTTTTTCCTG
CAACTGGCGCAACAGCTCAATGCCTTGCTCGATGCCAACGCGGTCAGCATCGCCGAAGTGTCGCGCCTGCTCAGCGCACT
GGCCGACGGCGACTTGAGTGCGCGCATGCAGGGCGATTTCCATGGCGTCTTCGCCACGATGCGCAACGACGCCAATACCA
CCGCCGAGCAACTGGCACTGGTGATCGGGCGTATCCAGCAGGCCGCCGGCAGCATTCATACTGCCTCAAGCGAAATTGCC
GCCGGCAACAACGACCTGTCGCAGCGCACCGAACAACAAGCGGCCAATCTGGAAGAGACTGCCGCCTCGATGGAGGAACT
CACTTCCACCGTCAAGCAGAATGCGGAGAGCGCACGCCAGGCCAACCAGCTGGCGATCGGTGCGGCTGACGTGGCTTCGC
AGGGCGGCGCGGTGGTGGCGCAGGTGGTCACCACCATGTCCGGCATCGAAGTTTCATCGAAAAAGATCGCCGAGATCATC
AGCGTCATCGATGGCATCGCGTTCCAGACCAACATCCTGGCGCTCAACGCCGCCGTGGAAGCGGCGCGTGCCGGCGAACA
GGGCCGGGGTTTTGCCGTTGTGGCCTCCGAGGTGCGCACGCTGGCGCAGCGGTCGGCCGGTGCCGCAAAAGAGATCAAAC
ATTTGATCGACGATTCGGTGAGCAAGGTCGCCGAGGGATCGCAGCTGGTGCATCAGGCCGGCACCACCATGGCCGACATC
GTTGCCAGCGTGCAGCGCGTCACCGACATCATGGGCGAGATCGCTGCCGCGTCGCAAGAACAGTCGTCGGGCATCGAGCA
GGTCAACCTCACCATCACCCAGATGGATGAAGCGACCCAGCAGAACGCCGCGTTAGTGGAGGAAGCCACTGCCGCTGCGC
GCACCATGGAAGACCAGGCCAGCCAGCTGGCGCACGCAGTGTCGCGCTTTACCCTGGCCGATGCGCCGCCGTCGCAGGCT
GCAACGCCTGCGGCCAAAAAGGCCGCCGTCGTCGCAGTTGCCCGGGCAAGCAAGACCAGCACGCGTGCGCCGGGCGCACG
CAAGCCGGCAGTGAACGCACCCGCGGCCACCGCCGGCAACGACGGCCAGTGGCAGGACTTCTGA

Upstream 100 bases:

>100_bases
CTGTCTTTCCGCTTCTGACACGGGTTGCACCATGAAGATCATGCACATGCTGGGCGTCCTGGTGCTGGTGGCCGCATTGG
CGCTGCTCGCGCTTGGTGGC

Downstream 100 bases:

>100_bases
GCAAGGCCGCTCTGCAACTGCGGCCTGGATATGGCGCAGTGACGCATAGCGCTGTTTAGCGGCCCTGCGACCCGGCCCCA
TCGCCGCGACAGCTGTATTG

Product: chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 767; Mature: 766

Protein sequence:

>767_residues
MGYNGQRGLLDAIAAQVISSDALRNHMQADMMHDALRGDVTAALLAASTKDDKAVAAARTALGEHAGEFRESLAANRKLP
LAPALRGELDAVTPALQAYIASADHVVNAAETHADSAAAYADFNDKFGQLQTRMGAISERILALNEASRRQAEQDSHRVM
WQQGSAVVLALVCLALAAGWILRSVFGLLGGEPQLAMAAAQHIAEGCLDQPIPVAAKHSRSLMAALARMQRDLRERLERE
RSIAAENLRIRTALDNASTGMYIADPDLTIIYTNGALQDLLHTYADDIQACAPAFHRTANLVGQPVSLLEVGNAQDAEIY
QRLDRQGAAQREVQYRSTCIAQNVSAIRDETGAHLGFVCEWRDRTAEARVEIDVADVVRSAAAGDLSKRIDSAGKQGFFL
QLAQQLNALLDANAVSIAEVSRLLSALADGDLSARMQGDFHGVFATMRNDANTTAEQLALVIGRIQQAAGSIHTASSEIA
AGNNDLSQRTEQQAANLEETAASMEELTSTVKQNAESARQANQLAIGAADVASQGGAVVAQVVTTMSGIEVSSKKIAEII
SVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSAGAAKEIKHLIDDSVSKVAEGSQLVHQAGTTMADI
VASVQRVTDIMGEIAAASQEQSSGIEQVNLTITQMDEATQQNAALVEEATAAARTMEDQASQLAHAVSRFTLADAPPSQA
ATPAAKKAAVVAVARASKTSTRAPGARKPAVNAPAATAGNDGQWQDF

Sequences:

>Translated_767_residues
MGYNGQRGLLDAIAAQVISSDALRNHMQADMMHDALRGDVTAALLAASTKDDKAVAAARTALGEHAGEFRESLAANRKLP
LAPALRGELDAVTPALQAYIASADHVVNAAETHADSAAAYADFNDKFGQLQTRMGAISERILALNEASRRQAEQDSHRVM
WQQGSAVVLALVCLALAAGWILRSVFGLLGGEPQLAMAAAQHIAEGCLDQPIPVAAKHSRSLMAALARMQRDLRERLERE
RSIAAENLRIRTALDNASTGMYIADPDLTIIYTNGALQDLLHTYADDIQACAPAFHRTANLVGQPVSLLEVGNAQDAEIY
QRLDRQGAAQREVQYRSTCIAQNVSAIRDETGAHLGFVCEWRDRTAEARVEIDVADVVRSAAAGDLSKRIDSAGKQGFFL
QLAQQLNALLDANAVSIAEVSRLLSALADGDLSARMQGDFHGVFATMRNDANTTAEQLALVIGRIQQAAGSIHTASSEIA
AGNNDLSQRTEQQAANLEETAASMEELTSTVKQNAESARQANQLAIGAADVASQGGAVVAQVVTTMSGIEVSSKKIAEII
SVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSAGAAKEIKHLIDDSVSKVAEGSQLVHQAGTTMADI
VASVQRVTDIMGEIAAASQEQSSGIEQVNLTITQMDEATQQNAALVEEATAAARTMEDQASQLAHAVSRFTLADAPPSQA
ATPAAKKAAVVAVARASKTSTRAPGARKPAVNAPAATAGNDGQWQDF
>Mature_766_residues
GYNGQRGLLDAIAAQVISSDALRNHMQADMMHDALRGDVTAALLAASTKDDKAVAAARTALGEHAGEFRESLAANRKLPL
APALRGELDAVTPALQAYIASADHVVNAAETHADSAAAYADFNDKFGQLQTRMGAISERILALNEASRRQAEQDSHRVMW
QQGSAVVLALVCLALAAGWILRSVFGLLGGEPQLAMAAAQHIAEGCLDQPIPVAAKHSRSLMAALARMQRDLRERLERER
SIAAENLRIRTALDNASTGMYIADPDLTIIYTNGALQDLLHTYADDIQACAPAFHRTANLVGQPVSLLEVGNAQDAEIYQ
RLDRQGAAQREVQYRSTCIAQNVSAIRDETGAHLGFVCEWRDRTAEARVEIDVADVVRSAAAGDLSKRIDSAGKQGFFLQ
LAQQLNALLDANAVSIAEVSRLLSALADGDLSARMQGDFHGVFATMRNDANTTAEQLALVIGRIQQAAGSIHTASSEIAA
GNNDLSQRTEQQAANLEETAASMEELTSTVKQNAESARQANQLAIGAADVASQGGAVVAQVVTTMSGIEVSSKKIAEIIS
VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSAGAAKEIKHLIDDSVSKVAEGSQLVHQAGTTMADIV
ASVQRVTDIMGEIAAASQEQSSGIEQVNLTITQMDEATQQNAALVEEATAAARTMEDQASQLAHAVSRFTLADAPPSQAA
TPAAKKAAVVAVARASKTSTRAPGARKPAVNAPAATAGNDGQWQDF

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=324, Percent_Identity=58.3333333333333, Blast_Score=300, Evalue=3e-82,
Organism=Escherichia coli, GI1788195, Length=306, Percent_Identity=58.8235294117647, Blast_Score=297, Evalue=1e-81,
Organism=Escherichia coli, GI1788194, Length=278, Percent_Identity=57.9136690647482, Blast_Score=288, Evalue=1e-78,
Organism=Escherichia coli, GI1787690, Length=272, Percent_Identity=59.9264705882353, Blast_Score=278, Evalue=1e-75,
Organism=Escherichia coli, GI1789453, Length=248, Percent_Identity=45.5645161290323, Blast_Score=206, Evalue=4e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 80729; Mature: 80598

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYNGQRGLLDAIAAQVISSDALRNHMQADMMHDALRGDVTAALLAASTKDDKAVAAART
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
ALGEHAGEFRESLAANRKLPLAPALRGELDAVTPALQAYIASADHVVNAAETHADSAAAY
HHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
ADFNDKFGQLQTRMGAISERILALNEASRRQAEQDSHRVMWQQGSAVVLALVCLALAAGW
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
ILRSVFGLLGGEPQLAMAAAQHIAEGCLDQPIPVAAKHSRSLMAALARMQRDLRERLERE
HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RSIAAENLRIRTALDNASTGMYIADPDLTIIYTNGALQDLLHTYADDIQACAPAFHRTAN
HHHHHHCCEEEEEECCCCCCCEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
LVGQPVSLLEVGNAQDAEIYQRLDRQGAAQREVQYRSTCIAQNVSAIRDETGAHLGFVCE
HHCCCHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
WRDRTAEARVEIDVADVVRSAAAGDLSKRIDSAGKQGFFLQLAQQLNALLDANAVSIAEV
CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHH
SRLLSALADGDLSARMQGDFHGVFATMRNDANTTAEQLALVIGRIQQAAGSIHTASSEIA
HHHHHHHHCCCCCHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHCCCHHHC
AGNNDLSQRTEQQAANLEETAASMEELTSTVKQNAESARQANQLAIGAADVASQGGAVVA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECHHHHHCCCCHHHH
QVVTTMSGIEVSSKKIAEIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRT
HHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
LAQRSAGAAKEIKHLIDDSVSKVAEGSQLVHQAGTTMADIVASVQRVTDIMGEIAAASQE
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCH
QSSGIEQVNLTITQMDEATQQNAALVEEATAAARTMEDQASQLAHAVSRFTLADAPPSQA
HHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
ATPAAKKAAVVAVARASKTSTRAPGARKPAVNAPAATAGNDGQWQDF
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GYNGQRGLLDAIAAQVISSDALRNHMQADMMHDALRGDVTAALLAASTKDDKAVAAART
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
ALGEHAGEFRESLAANRKLPLAPALRGELDAVTPALQAYIASADHVVNAAETHADSAAAY
HHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
ADFNDKFGQLQTRMGAISERILALNEASRRQAEQDSHRVMWQQGSAVVLALVCLALAAGW
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
ILRSVFGLLGGEPQLAMAAAQHIAEGCLDQPIPVAAKHSRSLMAALARMQRDLRERLERE
HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RSIAAENLRIRTALDNASTGMYIADPDLTIIYTNGALQDLLHTYADDIQACAPAFHRTAN
HHHHHHCCEEEEEECCCCCCCEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
LVGQPVSLLEVGNAQDAEIYQRLDRQGAAQREVQYRSTCIAQNVSAIRDETGAHLGFVCE
HHCCCHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
WRDRTAEARVEIDVADVVRSAAAGDLSKRIDSAGKQGFFLQLAQQLNALLDANAVSIAEV
CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHH
SRLLSALADGDLSARMQGDFHGVFATMRNDANTTAEQLALVIGRIQQAAGSIHTASSEIA
HHHHHHHHCCCCCHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHCCCHHHC
AGNNDLSQRTEQQAANLEETAASMEELTSTVKQNAESARQANQLAIGAADVASQGGAVVA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECHHHHHCCCCHHHH
QVVTTMSGIEVSSKKIAEIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRT
HHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
LAQRSAGAAKEIKHLIDDSVSKVAEGSQLVHQAGTTMADIVASVQRVTDIMGEIAAASQE
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCH
QSSGIEQVNLTITQMDEATQQNAALVEEATAAARTMEDQASQLAHAVSRFTLADAPPSQA
HHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
ATPAAKKAAVVAVARASKTSTRAPGARKPAVNAPAATAGNDGQWQDF
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]