| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21242642
Identifier: 21242642
GI number: 21242642
Start: 2216401
End: 2217474
Strand: Reverse
Name: 21242642
Synonym: XAC1898
Alternate gene names: NA
Gene position: 2217474-2216401 (Counterclockwise)
Preceding gene: 77748618
Following gene: 21242641
Centisome position: 42.85
GC content: 64.9
Gene sequence:
>1074_bases GTGGCAGGATTTCTAACCGCCCCGTGCGCAGTGGATGCAAGCGTACACAAGCGTCACCGTACGTACGCAGCGTTACCTGC ATTCCACAGCTGCATCCGGCATGGCGCATCTGGGCGCGCTGCGCATGCCCTGCCCTTCCGCCCGTCCGACGCGCATCAAG AATCATGCAGCGTTGCCGTTAGGGTGGATGACATCGATTGCCTGCGCCCCACCGCAGCAGCCGGTCCAGCAATGCATGCG TGCTGTTGCAGCCAGCACAGCCACGCATGCATCCGGATATTCGTTCCCGCAGGTTGCCACGCAAGGGATGCCATGAAGCC GTCTGTTATCGCCAGCTGTTTTGTGCTGTTGGGTATGATGGGTCAGGCCCGCGCTGAAGACCCGATCGCGACCGACCGCC CGGATTTCGTGGAATCCAGCCTCACCGTCGGCGACCGCCGCGTGCAGGTGGAAACCAGCGTCGCGTGGGAACGCGACGAC GCCGTGGATGCATATTCCACGCCCACGCTGCTGCGCTACGGCCTGGGCCAGACCTGGGAATTGCGGATGGAAACCGATGG CTGGCAGCGCATCGACCTGCCTGGCGATGCGCAGGTGAGCGGCATGTCCGACGTCTCGCTCGGCATCAAGCATCACCTGG CCAGTTCCGACGATGGCAAGACCTCGCTGGCCTGGTTGCTGCATGTGGATCTGCCCAGCGGCGCGCAGGCATTGCGCGGC CATGGCGCCCGCCCCTCGTTCCGGCTGGTGGCCGAATGGGAGCTCAGCGACAGCATTTCCGCGGGCATGATGCCCGGGGT GATCTGGGACGACGATGGCCAGGGCAACCGGTATACCGCCGGCATTTTCGGCGCCGTTCTCGGCAAGGCCTGGAACGACC GCGTGCGCTCGTTCGTCGAAGTGGCGTTGCCGCAGATCGCCAACAGCGACGATGGCGGCACCGTCGCCCTGCTCGATATC GGCTCGGCCTGGCTGCTGAGCAACGACGTCCAACTGGACGCTGTCTACAGCCGCGGACTCAACGACCGCTCACCGGATCA CGCGCTCGGCGTGGGCCTGTCTTTCCGCTTCTGA
Upstream 100 bases:
>100_bases TGGCCACCACCAAGCCGGCACCTGCCCGCGGCAAGCGCGCAGCGACACCGCTGCGTCAGTCCGTGGGCAAGTCGTCCGGC ACTGCCGTTAACGACAGCCA
Downstream 100 bases:
>100_bases CACGGGTTGCACCATGAAGATCATGCACATGCTGGGCGTCCTGGTGCTGGTGGCCGCATTGGCGCTGCTCGCGCTTGGTG GCGTGGGCTATAACGGCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MAGFLTAPCAVDASVHKRHRTYAALPAFHSCIRHGASGRAAHALPFRPSDAHQESCSVAVRVDDIDCLRPTAAAGPAMHA CCCSQHSHACIRIFVPAGCHARDAMKPSVIASCFVLLGMMGQARAEDPIATDRPDFVESSLTVGDRRVQVETSVAWERDD AVDAYSTPTLLRYGLGQTWELRMETDGWQRIDLPGDAQVSGMSDVSLGIKHHLASSDDGKTSLAWLLHVDLPSGAQALRG HGARPSFRLVAEWELSDSISAGMMPGVIWDDDGQGNRYTAGIFGAVLGKAWNDRVRSFVEVALPQIANSDDGGTVALLDI GSAWLLSNDVQLDAVYSRGLNDRSPDHALGVGLSFRF
Sequences:
>Translated_357_residues MAGFLTAPCAVDASVHKRHRTYAALPAFHSCIRHGASGRAAHALPFRPSDAHQESCSVAVRVDDIDCLRPTAAAGPAMHA CCCSQHSHACIRIFVPAGCHARDAMKPSVIASCFVLLGMMGQARAEDPIATDRPDFVESSLTVGDRRVQVETSVAWERDD AVDAYSTPTLLRYGLGQTWELRMETDGWQRIDLPGDAQVSGMSDVSLGIKHHLASSDDGKTSLAWLLHVDLPSGAQALRG HGARPSFRLVAEWELSDSISAGMMPGVIWDDDGQGNRYTAGIFGAVLGKAWNDRVRSFVEVALPQIANSDDGGTVALLDI GSAWLLSNDVQLDAVYSRGLNDRSPDHALGVGLSFRF >Mature_356_residues AGFLTAPCAVDASVHKRHRTYAALPAFHSCIRHGASGRAAHALPFRPSDAHQESCSVAVRVDDIDCLRPTAAAGPAMHAC CCSQHSHACIRIFVPAGCHARDAMKPSVIASCFVLLGMMGQARAEDPIATDRPDFVESSLTVGDRRVQVETSVAWERDDA VDAYSTPTLLRYGLGQTWELRMETDGWQRIDLPGDAQVSGMSDVSLGIKHHLASSDDGKTSLAWLLHVDLPSGAQALRGH GARPSFRLVAEWELSDSISAGMMPGVIWDDDGQGNRYTAGIFGAVLGKAWNDRVRSFVEVALPQIANSDDGGTVALLDIG SAWLLSNDVQLDAVYSRGLNDRSPDHALGVGLSFRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38313; Mature: 38182
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGFLTAPCAVDASVHKRHRTYAALPAFHSCIRHGASGRAAHALPFRPSDAHQESCSVAV CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCEEEE RVDDIDCLRPTAAAGPAMHACCCSQHSHACIRIFVPAGCHARDAMKPSVIASCFVLLGMM EECCCHHCCCCCCCCCHHHHHHHCCCCCEEEEEEECCCCCHHHCCCHHHHHHHHHHHHHC GQARAEDPIATDRPDFVESSLTVGDRRVQVETSVAWERDDAVDAYSTPTLLRYGLGQTWE CCCCCCCCCCCCCCHHHHHCCCCCCEEEEEEEEEEECCCCCCCCCCCCHHHHHCCCCEEE LRMETDGWQRIDLPGDAQVSGMSDVSLGIKHHLASSDDGKTSLAWLLHVDLPSGAQALRG EEEECCCCEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCHHHHHC HGARPSFRLVAEWELSDSISAGMMPGVIWDDDGQGNRYTAGIFGAVLGKAWNDRVRSFVE CCCCCCEEEEEEECCCCCCCCCCCCCEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHH VALPQIANSDDGGTVALLDIGSAWLLSNDVQLDAVYSRGLNDRSPDHALGVGLSFRF HHHHHHCCCCCCCEEEEEECCCEEEECCCCEEEHHHHCCCCCCCCCHHEECCEEECC >Mature Secondary Structure AGFLTAPCAVDASVHKRHRTYAALPAFHSCIRHGASGRAAHALPFRPSDAHQESCSVAV CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCEEEE RVDDIDCLRPTAAAGPAMHACCCSQHSHACIRIFVPAGCHARDAMKPSVIASCFVLLGMM EECCCHHCCCCCCCCCHHHHHHHCCCCCEEEEEEECCCCCHHHCCCHHHHHHHHHHHHHC GQARAEDPIATDRPDFVESSLTVGDRRVQVETSVAWERDDAVDAYSTPTLLRYGLGQTWE CCCCCCCCCCCCCCHHHHHCCCCCCEEEEEEEEEEECCCCCCCCCCCCHHHHHCCCCEEE LRMETDGWQRIDLPGDAQVSGMSDVSLGIKHHLASSDDGKTSLAWLLHVDLPSGAQALRG EEEECCCCEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCHHHHHC HGARPSFRLVAEWELSDSISAGMMPGVIWDDDGQGNRYTAGIFGAVLGKAWNDRVRSFVE CCCCCCEEEEEEECCCCCCCCCCCCCEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHH VALPQIANSDDGGTVALLDIGSAWLLSNDVQLDAVYSRGLNDRSPDHALGVGLSFRF HHHHHHCCCCCCCEEEEEECCCEEEECCCCEEEHHHHCCCCCCCCCHHEECCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA