| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is hisD
Identifier: 21242573
GI number: 21242573
Start: 2124470
End: 2125765
Strand: Direct
Name: hisD
Synonym: XAC1829
Alternate gene names: 21242573
Gene position: 2124470-2125765 (Clockwise)
Preceding gene: 21242572
Following gene: 21242574
Centisome position: 41.05
GC content: 67.36
Gene sequence:
>1296_bases ATGAAGATTCTCGATTGGTCCCAACTCGACGGTGCCGCACAGACCGACGCATTGACCCGCCCGGTGCAGACCGTGGCCGC ACGAACGCGCGATGCGGTCGCCGCGTTGATTGCCGACGTACGCACGCGCGGCGATGCCGCATTGCGCGAGATCACCGCGC ATTTCGATGGCGTGTCGCTGGACAGCTTCGCAGTGAGCGAAGCCGAATTCGCCGCCGCCGAAGCGGCCGTCCCACCGGAG CTGCGCCAGGCCATGCAGGATGCGGTTGCACGCATCGACACCTTCCACCGCGCCGGTATGAGCGGGGGCTATGCGGTGGA AACCGCGCCCGGTGTGGTGTGCGAAAAGATCGTGCGTCCGATCGGTCGTGTCGGTTTATACGTGCCGGCCGGCAGCGCGC CGTTGCCGTCGACGGCATTGATGCTCGGCGTGCCTGCGCGTCTGGCCGGATGCCGCGAGGTGGTGTTGTGCACGCCGCCG CGCAAGGACGGCAGCGTGGACCCGGCGGTGCTGGTGGCCGCGCGGCTCACCGGCGTGCGCCGCGTGTTCAAGCTCGGCGG TGCGCAGGCGATCGCGGCGATGGCGTATGGCACCGAATCGCTGCCCAGCTGCGACAAGCTGTTCGGCCCGGGCAACAGCT ATGTCACCGAAGCCAAGCAGCAGGTGGCCCAGTCCGGTGCGGCGGCGATCGACATGCCGGCCGGCCCCTCGGAAGTCTTG GTGATCGCCGATGCGGGCGCGCAACCGGCGTTCGTGGCTGCTGACCTATTGTCGCAGGCCGAACACGGGCCCGATTCGCA GGTGCTGTTGCTCTCCGACAGCGACGCGTTGATCGGTGCGGTGCGAGCGCAGCTGGAAGTTCAGCTGGCGCAACTGTCGC GTGCCGACATTGCGCGCCAGGCGCTGGCGCAATCGCGGCTGATCAAGGTGCAGACGCTGGATGAGGCGTTTGCGATCAGT AATCGCTATGCGCCGGAACATCTGATTCTTGCGCTGCGCGAACCGCGCGGATGGTTGGCGCAAGTCGAAGCGGCCGGATC GGTGTTTCTCGGCGATTACACGCCCGAAGCGCTTGGCGACTACTGCAGCGGCACCAATCATGTATTGCCGACCAGCGGTG CGGCGCGCGCCTACAGCGGCGTGAGCGTGGCCAGCTTCCAGAACATGGTCAGCGTGCAGGCAGCCAGCAAGGCCGGCATC GACGGTATCGGCGCATGCGCTTTGGTCCTCGCGCGGGCCGAGGGGCTGGATGCGCATGCCAACGCGGTGGCGCTACGCAT GGGAGTGGCGGCATGA
Upstream 100 bases:
>100_bases AGACCATGTGCCACGGCGCGGTGACCTGGCAGCGCCTGGAAGAACTCGAACGCGCAGGTGCGCAAGGCTTGATGGTGTTG ACGGTGGAGCGCTCGCTGGC
Downstream 100 bases:
>100_bases GCGCGTCGTCGATTCTGGATCTGGTACGCGAAGACCTGCGTGCATTCGCGGGCTATTCGTCGGCGCGCACCAGCGCGTTG CAGGGCGATGTGTGGCTCAA
Product: histidinol dehydrogenase
Products: NA
Alternate protein names: HDH
Number of amino acids: Translated: 431; Mature: 431
Protein sequence:
>431_residues MKILDWSQLDGAAQTDALTRPVQTVAARTRDAVAALIADVRTRGDAALREITAHFDGVSLDSFAVSEAEFAAAEAAVPPE LRQAMQDAVARIDTFHRAGMSGGYAVETAPGVVCEKIVRPIGRVGLYVPAGSAPLPSTALMLGVPARLAGCREVVLCTPP RKDGSVDPAVLVAARLTGVRRVFKLGGAQAIAAMAYGTESLPSCDKLFGPGNSYVTEAKQQVAQSGAAAIDMPAGPSEVL VIADAGAQPAFVAADLLSQAEHGPDSQVLLLSDSDALIGAVRAQLEVQLAQLSRADIARQALAQSRLIKVQTLDEAFAIS NRYAPEHLILALREPRGWLAQVEAAGSVFLGDYTPEALGDYCSGTNHVLPTSGAARAYSGVSVASFQNMVSVQAASKAGI DGIGACALVLARAEGLDAHANAVALRMGVAA
Sequences:
>Translated_431_residues MKILDWSQLDGAAQTDALTRPVQTVAARTRDAVAALIADVRTRGDAALREITAHFDGVSLDSFAVSEAEFAAAEAAVPPE LRQAMQDAVARIDTFHRAGMSGGYAVETAPGVVCEKIVRPIGRVGLYVPAGSAPLPSTALMLGVPARLAGCREVVLCTPP RKDGSVDPAVLVAARLTGVRRVFKLGGAQAIAAMAYGTESLPSCDKLFGPGNSYVTEAKQQVAQSGAAAIDMPAGPSEVL VIADAGAQPAFVAADLLSQAEHGPDSQVLLLSDSDALIGAVRAQLEVQLAQLSRADIARQALAQSRLIKVQTLDEAFAIS NRYAPEHLILALREPRGWLAQVEAAGSVFLGDYTPEALGDYCSGTNHVLPTSGAARAYSGVSVASFQNMVSVQAASKAGI DGIGACALVLARAEGLDAHANAVALRMGVAA >Mature_431_residues MKILDWSQLDGAAQTDALTRPVQTVAARTRDAVAALIADVRTRGDAALREITAHFDGVSLDSFAVSEAEFAAAEAAVPPE LRQAMQDAVARIDTFHRAGMSGGYAVETAPGVVCEKIVRPIGRVGLYVPAGSAPLPSTALMLGVPARLAGCREVVLCTPP RKDGSVDPAVLVAARLTGVRRVFKLGGAQAIAAMAYGTESLPSCDKLFGPGNSYVTEAKQQVAQSGAAAIDMPAGPSEVL VIADAGAQPAFVAADLLSQAEHGPDSQVLLLSDSDALIGAVRAQLEVQLAQLSRADIARQALAQSRLIKVQTLDEAFAIS NRYAPEHLILALREPRGWLAQVEAAGSVFLGDYTPEALGDYCSGTNHVLPTSGAARAYSGVSVASFQNMVSVQAASKAGI DGIGACALVLARAEGLDAHANAVALRMGVAA
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family
Homologues:
Organism=Escherichia coli, GI1788331, Length=427, Percent_Identity=51.7564402810305, Blast_Score=421, Evalue=1e-119, Organism=Saccharomyces cerevisiae, GI6319819, Length=425, Percent_Identity=47.2941176470588, Blast_Score=378, Evalue=1e-105,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HISX_XANAC (Q8PLG9)
Other databases:
- EMBL: AE008923 - RefSeq: NP_642155.1 - ProteinModelPortal: Q8PLG9 - SMR: Q8PLG9 - GeneID: 1155900 - GenomeReviews: AE008923_GR - KEGG: xac:XAC1829 - NMPDR: fig|190486.1.peg.1799 - HOGENOM: HBG329596 - OMA: LDAHKNA - ProtClustDB: PRK00877 - BioCyc: XAXO190486:XAC1829-MONOMER - BRENDA: 1.1.1.23 - HAMAP: MF_01024 - InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 - PANTHER: PTHR21256:SF2 - PIRSF: PIRSF000099 - PRINTS: PR00083 - TIGRFAMs: TIGR00069
Pfam domain/function: PF00815 Histidinol_dh; SSF53720 Aldehyde_DH/Histidinol_DH
EC number: =1.1.1.23
Molecular weight: Translated: 44439; Mature: 44439
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: PS00611 HISOL_DEHYDROGENASE
Important sites: ACT_SITE 326-326 ACT_SITE 327-327 BINDING 127-127 BINDING 189-189 BINDING 212-212 BINDING 237-237 BINDING 259-259 BINDING 262-262 BINDING 327-327 BINDING 360-360 BINDING 414-414 BINDING 419-419
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILDWSQLDGAAQTDALTRPVQTVAARTRDAVAALIADVRTRGDAALREITAHFDGVSL CCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC DSFAVSEAEFAAAEAAVPPELRQAMQDAVARIDTFHRAGMSGGYAVETAPGVVCEKIVRP CHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHH IGRVGLYVPAGSAPLPSTALMLGVPARLAGCREVVLCTPPRKDGSVDPAVLVAARLTGVR HHHCEEEECCCCCCCCCHHHEECCCHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHH RVFKLGGAQAIAAMAYGTESLPSCDKLFGPGNSYVTEAKQQVAQSGAAAIDMPAGPSEVL HHHHHCCHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCEE VIADAGAQPAFVAADLLSQAEHGPDSQVLLLSDSDALIGAVRAQLEVQLAQLSRADIARQ EEECCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH ALAQSRLIKVQTLDEAFAISNRYAPEHLILALREPRGWLAQVEAAGSVFLGDYTPEALGD HHHHHHEEEEEEHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHCCCCEEECCCCHHHHHH YCSGTNHVLPTSGAARAYSGVSVASFQNMVSVQAASKAGIDGIGACALVLARAEGLDAHA HHCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCC NAVALRMGVAA CCEEEECCCCC >Mature Secondary Structure MKILDWSQLDGAAQTDALTRPVQTVAARTRDAVAALIADVRTRGDAALREITAHFDGVSL CCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC DSFAVSEAEFAAAEAAVPPELRQAMQDAVARIDTFHRAGMSGGYAVETAPGVVCEKIVRP CHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHH IGRVGLYVPAGSAPLPSTALMLGVPARLAGCREVVLCTPPRKDGSVDPAVLVAARLTGVR HHHCEEEECCCCCCCCCHHHEECCCHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHH RVFKLGGAQAIAAMAYGTESLPSCDKLFGPGNSYVTEAKQQVAQSGAAAIDMPAGPSEVL HHHHHCCHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCEE VIADAGAQPAFVAADLLSQAEHGPDSQVLLLSDSDALIGAVRAQLEVQLAQLSRADIARQ EEECCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH ALAQSRLIKVQTLDEAFAISNRYAPEHLILALREPRGWLAQVEAAGSVFLGDYTPEALGD HHHHHHEEEEEEHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHCCCCEEECCCCHHHHHH YCSGTNHVLPTSGAARAYSGVSVASFQNMVSVQAASKAGIDGIGACALVLARAEGLDAHA HHCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCC NAVALRMGVAA CCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12024217