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The map label for this gene is tspO [H]

Identifier: 21242563

GI number: 21242563

Start: 2113080

End: 2113580

Strand: Direct

Name: tspO [H]

Synonym: XAC1819

Alternate gene names: 21242563

Gene position: 2113080-2113580 (Clockwise)

Preceding gene: 21242562

Following gene: 21242564

Centisome position: 40.83

GC content: 62.48

Gene sequence:

>501_bases
ATGACGCAACATCGTTTAAACACATCGCAATGGTTCGGTCTTCTCGGCTGGCTGGTGCTGTGCTACGCGGTCGCCGCGCT
GGGCGCAATGGCATCAATCCAGGCGGCCAGCTTTTATGCGCAGCTGCAGCGGCCGGCATGGGCGCCGCCGGGGTGGTTGT
TCGGGTCGGTGTGGACGGTGCTGTACGGGATGATGGCGGTGTCGGTGTGGTCGGTGTGGCGCCGTGGGGGATGGGCTGGC
GCGCGTGTGGCGCTGACTCTTTTCTTGGTGCAGCTGGCGCTCAATGGGCTGTGGAGTTGGTTGTTCTTTGCATGGCATCT
GGGGGCGTGGGCGTTTACGGACATCGTGGCGCTGTGGCTGGTGCTGGCGGCGACCATCGGTGTGTTTGCGAAGAGGCAAG
CTCTGGCGGCGTGGTTGTTGGTGCCGTATCTGGCATGGGTGAGCTTTGCGGCGGCGCTTAATTTCTCGGTCTGGCAACTC
AACCTTCAGATGCTTGGCTGA

Upstream 100 bases:

>100_bases
GTACGGCCTTAGTAGAGCTTTGACTTGCTCAGTTGCGTCGTCATGGCTTGCACACATGCTCTGGCAGGCTGGCGAACGTT
GACAACTCACCTCGACCGTC

Downstream 100 bases:

>100_bases
TCTTCGCTGCTGACCTTGGCTCGCACCGATTCGGGTTTCCGATAGCGACGATCTGTTGCTTGATGCGAAGTGGCCTGTTG
CTCGAAGCAACCTGATGCCT

Product: tryptophan-rich sensory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MTQHRLNTSQWFGLLGWLVLCYAVAALGAMASIQAASFYAQLQRPAWAPPGWLFGSVWTVLYGMMAVSVWSVWRRGGWAG
ARVALTLFLVQLALNGLWSWLFFAWHLGAWAFTDIVALWLVLAATIGVFAKRQALAAWLLVPYLAWVSFAAALNFSVWQL
NLQMLG

Sequences:

>Translated_166_residues
MTQHRLNTSQWFGLLGWLVLCYAVAALGAMASIQAASFYAQLQRPAWAPPGWLFGSVWTVLYGMMAVSVWSVWRRGGWAG
ARVALTLFLVQLALNGLWSWLFFAWHLGAWAFTDIVALWLVLAATIGVFAKRQALAAWLLVPYLAWVSFAAALNFSVWQL
NLQMLG
>Mature_165_residues
TQHRLNTSQWFGLLGWLVLCYAVAALGAMASIQAASFYAQLQRPAWAPPGWLFGSVWTVLYGMMAVSVWSVWRRGGWAGA
RVALTLFLVQLALNGLWSWLFFAWHLGAWAFTDIVALWLVLAATIGVFAKRQALAAWLLVPYLAWVSFAAALNFSVWQLN
LQMLG

Specific function: Unknown

COG id: COG3476

COG function: function code T; Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TspO/BZRP family [H]

Homologues:

Organism=Homo sapiens, GI74275350, Length=125, Percent_Identity=42.4, Blast_Score=84, Evalue=6e-17,
Organism=Drosophila melanogaster, GI19920472, Length=130, Percent_Identity=40, Blast_Score=87, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004307 [H]

Pfam domain/function: PF03073 TspO_MBR [H]

EC number: NA

Molecular weight: Translated: 18522; Mature: 18391

Theoretical pI: Translated: 10.82; Mature: 10.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQHRLNTSQWFGLLGWLVLCYAVAALGAMASIQAASFYAQLQRPAWAPPGWLFGSVWTV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
LYGMMAVSVWSVWRRGGWAGARVALTLFLVQLALNGLWSWLFFAWHLGAWAFTDIVALWL
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLAATIGVFAKRQALAAWLLVPYLAWVSFAAALNFSVWQLNLQMLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TQHRLNTSQWFGLLGWLVLCYAVAALGAMASIQAASFYAQLQRPAWAPPGWLFGSVWTV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
LYGMMAVSVWSVWRRGGWAGARVALTLFLVQLALNGLWSWLFFAWHLGAWAFTDIVALWL
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLAATIGVFAKRQALAAWLLVPYLAWVSFAAALNFSVWQLNLQMLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2747617 [H]