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The map label for this gene is fhaB [H]

Identifier: 21242562

GI number: 21242562

Start: 2112265

End: 2113002

Strand: Direct

Name: fhaB [H]

Synonym: XAC1818

Alternate gene names: 21242562

Gene position: 2112265-2113002 (Clockwise)

Preceding gene: 21242561

Following gene: 21242563

Centisome position: 40.81

GC content: 63.69

Gene sequence:

>738_bases
TTGGCACCGATTTCACCGCAAATGGGCCGCGCGGCAACCAGCCTGGGCGGCATCAACGCCTGGCGCAGCAACGGCCCGGG
CCGTCGCTACCTGATCGAGACCGATCCGCGCTTCGTCAATTACGACAACTTCATCAGCAGCGATTTCCTGCTGGACAAGC
TGGGTGTGGACCCGGAGTGGACCCAGACCCGCCTGGGCGATGGCTTCTACGAGCAGCGCCTGGTGCTGGACCAGATCACC
GAGCTCACCGGCCGCCGCTACCTGGGCAACTACGCCGATGGCGTGGCGCAGTACCGCGCCTTGCTGGAATCGGGCGTGGC
CGCTGCAGGCCAGCTGCAATTGAGCATGGGCGTGGGTCTCACCGCCGCGCAGGCCGCTGCACTCACGCAGGACATCGTGT
GGATGGTGGAGCAGGAGTACCAGGGCCAGACCGTGCTGGTGCCGGTGGTGTACCTGGCCTCCAACTCGCTGCAGTTGCGT
GGCAATGGTGCCTTGATCGCCGGTGGCAACGTCGAGCTCAACGCCACCAATTCCATGAGCAACCAGGGCGTCATCGCAGG
CGCCGACGTCAGCATCACCGCCGGCAACCTGCTCAACCAGGGCCAGATCCAGGGCCGCGATGTCGCACTGGTGGCCCGAC
GTACCCCGATTTTAAGTAGCACCTCAGTTTTGGAGTCCAACTCGCCCGGAGATTTGGACATGACGTTACCAATCCGTACG
GCCTTAGTAGAGCTTTGA

Upstream 100 bases:

>100_bases
TGGGTGTGGTTATGATCGGTACGGCTCTAGCCATCAATCTGATCGCTGAGGCCGGAGTCTGTAAATTGCAGCCTCCGTTT
GCGGCGCGTGCATTGACCAC

Downstream 100 bases:

>100_bases
CTTGCTCAGTTGCGTCGTCATGGCTTGCACACATGCTCTGGCAGGCTGGCGAACGTTGACAACTCACCTCGACCGTCATG
ACGCAACATCGTTTAAACAC

Product: hemagglutinin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MAPISPQMGRAATSLGGINAWRSNGPGRRYLIETDPRFVNYDNFISSDFLLDKLGVDPEWTQTRLGDGFYEQRLVLDQIT
ELTGRRYLGNYADGVAQYRALLESGVAAAGQLQLSMGVGLTAAQAAALTQDIVWMVEQEYQGQTVLVPVVYLASNSLQLR
GNGALIAGGNVELNATNSMSNQGVIAGADVSITAGNLLNQGQIQGRDVALVARRTPILSSTSVLESNSPGDLDMTLPIRT
ALVEL

Sequences:

>Translated_245_residues
MAPISPQMGRAATSLGGINAWRSNGPGRRYLIETDPRFVNYDNFISSDFLLDKLGVDPEWTQTRLGDGFYEQRLVLDQIT
ELTGRRYLGNYADGVAQYRALLESGVAAAGQLQLSMGVGLTAAQAAALTQDIVWMVEQEYQGQTVLVPVVYLASNSLQLR
GNGALIAGGNVELNATNSMSNQGVIAGADVSITAGNLLNQGQIQGRDVALVARRTPILSSTSVLESNSPGDLDMTLPIRT
ALVEL
>Mature_244_residues
APISPQMGRAATSLGGINAWRSNGPGRRYLIETDPRFVNYDNFISSDFLLDKLGVDPEWTQTRLGDGFYEQRLVLDQITE
LTGRRYLGNYADGVAQYRALLESGVAAAGQLQLSMGVGLTAAQAAALTQDIVWMVEQEYQGQTVLVPVVYLASNSLQLRG
NGALIAGGNVELNATNSMSNQGVIAGADVSITAGNLLNQGQIQGRDVALVARRTPILSSTSVLESNSPGDLDMTLPIRTA
LVEL

Specific function: Evidence for a role in host-cell binding and infection [H]

COG id: COG3210

COG function: function code U; Large exoproteins involved in heme utilization or adhesion

Gene ontology:

Cell location: Cell surface [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010069
- InterPro:   IPR008619
- InterPro:   IPR008638
- InterPro:   IPR012334
- InterPro:   IPR011050
- InterPro:   IPR011102 [H]

Pfam domain/function: PF05594 Fil_haemagg; PF05860 Haemagg_act [H]

EC number: NA

Molecular weight: Translated: 26173; Mature: 26042

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPISPQMGRAATSLGGINAWRSNGPGRRYLIETDPRFVNYDNFISSDFLLDKLGVDPEW
CCCCCCCCCHHHHHCCCCCCCCCCCCCCEEEEECCCCEECCCCCCCCHHHHHHHCCCCCH
TQTRLGDGFYEQRLVLDQITELTGRRYLGNYADGVAQYRALLESGVAAAGQLQLSMGVGL
HHHHCCCCHHHHHHHHHHHHHHHCHHHHCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC
TAAQAAALTQDIVWMVEQEYQGQTVLVPVVYLASNSLQLRGNGALIAGGNVELNATNSMS
HHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEECCCEEEECCEEEEEECCCCC
NQGVIAGADVSITAGNLLNQGQIQGRDVALVARRTPILSSTSVLESNSPGDLDMTLPIRT
CCCEEECCCEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCHHHCCCCCCCEEEEEHHHH
ALVEL
HHHCC
>Mature Secondary Structure 
APISPQMGRAATSLGGINAWRSNGPGRRYLIETDPRFVNYDNFISSDFLLDKLGVDPEW
CCCCCCCCHHHHHCCCCCCCCCCCCCCEEEEECCCCEECCCCCCCCHHHHHHHCCCCCH
TQTRLGDGFYEQRLVLDQITELTGRRYLGNYADGVAQYRALLESGVAAAGQLQLSMGVGL
HHHHCCCCHHHHHHHHHHHHHHHCHHHHCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC
TAAQAAALTQDIVWMVEQEYQGQTVLVPVVYLASNSLQLRGNGALIAGGNVELNATNSMS
HHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEECCCEEEECCEEEEEECCCCC
NQGVIAGADVSITAGNLLNQGQIQGRDVALVARRTPILSSTSVLESNSPGDLDMTLPIRT
CCCEEECCCEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCHHHCCCCCCCEEEEEHHHH
ALVEL
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2388559; 12910271; 2539596; 1696934; 1791761 [H]