| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is thrA [H]
Identifier: 21242564
GI number: 21242564
Start: 2114170
End: 2116677
Strand: Direct
Name: thrA [H]
Synonym: XAC1820
Alternate gene names: 21242564
Gene position: 2114170-2116677 (Clockwise)
Preceding gene: 21242563
Following gene: 161485716
Centisome position: 40.85
GC content: 65.79
Gene sequence:
>2508_bases ATGTCATCGCATGCTGTTTCGTTCGAACCCGCTGCTGTTCTTGCGTCCTCTGCGCGCACTGTCGTGCACAAATTCGGCGG CACCTCGGTGGCAGATGCCGAGCGTTATCGGCATGTGGCGCAGCTGCTGCTTGCACGCGACGAGACGGTGCAGGTCACCG TGGTCTCGGCGATGAAGGGCGTCACCGATGCCTTGATCGAACTGGCCGAACTGGCGGCGAAGAATCGCCCCGAATGGCGC GAGCGGTGGCACGAAACGCGCGCACGCCATCGCGGTGCGGCGGTCGCCTTGCTCGGCGAGCATTCCGGGCCAACGGTGGA GTGGCTGGACGAACGCTTCGCGCATCTGTCGCAGATCCTCGGCGCGCTGGCGGTCATCGGGGAATTGCCGCGCGAAGTGC TCGACCGCGTGCAAGGACTGGGCGAGGTGTATTCGGCGCAGTTGCTGGGCGATCACTTTCGCGCGATCGGCGAAGACTGC GCAGTGCTGGACGCGCGCGATGTGCTGGTGGTCAATCGCGGCGAACTCGGTGTGGATGTGGACTGGGAGGCGAGTGCGCA GCGCCTCGCAACCTGGCGGCAAGCGCATCCGCAGACGCGCGTGGTGGTGACCGGATTCGTGGCGCGCGACCGTGCCGACC GCGTCACCACGCTGGGCCGCAACGGCAGCGATTATTCGGGTGCCATCTTCGCTGCATTGTTCGATGCAGACGAACTGCAT ATCTGGACCGATGTGGATGGCGTGCTGTCGGCCGACCCGCGCGTGGTGCCCGAAGCGGTGCAACTGGAAACACTGAGCTA CGACGAGGCCTGCGAGCTGGCATATTTCGGTGCGAAGGTGGTGCACCCGCAAACGATGTCGCCGGCGATCGAGCGCGGCC TGCCGATCATCATCCGCAACACCTTCCAGCCCGAGCATCCCGGCACGCGCATTACTGCCAGTAGCGCGGTGAGCGGGCCG ATCAAGGGTCTGACGTTGAGCCCGGATCTGGCGGTGCTGAATCTGGAAGGCACCGGTCTGATCGGTGTGCCGGGCACGGC CGAGCGCGTGTTCGCCGCGCTGCGCACCGCGCAGGTGTCGGTGGTGATGATCTCGCAGGGTTCGTCGGAACATTCGATCT GCTGCGTGGTCAAGCAGCACGAGTCCGAGCGTGCACGCAACGCATTGTTGCAAGCGTTCGCGCATGAACTCACGGTCGGG CAGGTGCAGCGCGTGCAGCTGACCACCGGCATCAGCGTGCTCGCAGCAGTAGGCGATGGTATGGCCGGTCAGCCGGGTGT GGCGGCGCGCTTGTTCGAATCGTTGGGGCGAGCCCAGGTCAATATCCTGGCAATTGCGCAGGGCTCCTCCGAACGCAATA TCTCGGTAGCGATCGATGCGGCGCACGCCACCAAGGCGTTGCGCGCGGCGCATGCCGGTTTCTGGTTGTCGCCGCAGACG TTTTCTGTAGGCGTGATCGGTCCGGGCAATGTGGGCGCGGCATTGCTGGACCAACTGCGCAACGCGCAACCGCAGTTGTT AGGCAAGGCCAATCTTGATCTGCGCCTGCGCGCGGTGGTCTCACGCGGTCGCATGCTGCTGGACGAACGCGGCCTGGTCG GCGACTGGCGCGATGCGTTTGCATCGTCCGCAACGCCCACCGATCTGGAACGCTTCACCACGCATCTGCTGTCTGCGCAT CTGCCGCATACGGTGATCATCGATTGCAGCGGCAGCGCCGAAGTCGCAGACCGTTATGCGGGCTGGCTGGCAGCCGGCAT CCACGTGGTGACGCCGAACAAGCAGGCGGGGTCCGGCCCGCTGGCGCGCTATGAGGCGATTCGCGCAGCGGCCGACGCCA GTGGTGCGCGCTTCCGTTATGAAGCCACCGTGGGCGCCGGTTTGCCGGTGATCACCACACTGCGCGACCTGGTGGACACC GGCGATGCAGTCACGTCCATCGAAGGCATCTTCTCCGGCACGTTGGCATGGTTGTTCAACAAGTACGAAGGCAGCGTGCC CTTCGCCGAACTGGTGACGCAGGCGCGCGGCATGGGCTATACCGAACCGGATCCGCGCGACGATCTGTCCGGCGTGGACG TGGCGCGCAAGTTGGTGATCCTGGCGCGCGAAGCAGGGCGCTCCATCAGCCTGGAAGATGTGCAGGTTGAAAGCCTGGTG CCTGAAGCGCTGCGCCAGGCCAGCGTGGACGATTTCATGGCGCGCTTACCGGAAGTGGATGCGTCCTTCGCGCAACGTCT GGCCCAAGCGCATGCGCGTGGCAATGTGCTGCGCTATGTCGCGCAGCTGCCGCCGGACCGCGCGCCCAGCGTGGGCCTGG TCGAGCTGCCGGCCGATCACGCGTTCGCCAATCTGCGTCTGACCGATAACGTGGTGCAGTTCACCACGCGGCGCTACTGC GAGAACCCGTTGGTGGTGCAGGGCCCGGGTGCCGGTCCGGAAGTGACCGCGGCAGGCGTGTTCGCCGATCTGCTGCGCGT GGCGGCAGGCGAGGGCGCGCGGCTGTGA
Upstream 100 bases:
>100_bases CGCGTAACTTCCGAAAACAACGGCCCCGCACCCGGATCAGGATGCGGGGGCTTCCCTCTCTCATCCGATGCGGACGGGGC CTCCCCAACGAGGTCTGTCG
Downstream 100 bases:
>100_bases CGCATGCTGTTGTCAGCCAGGCCGGCGTGAGCCAGGCGGCGGTGGCGCAGGGGCAGGGCAGCGATCACGCTTCCCTGGGC AAGCACGGCTTGCACGAAGC
Product: bifunctional aspartokinase I/homeserine dehydrogenase I
Products: NA
Alternate protein names: Aspartokinase I/homoserine dehydrogenase I; AKI-HDI; Aspartokinase; Homoserine dehydrogenase [H]
Number of amino acids: Translated: 835; Mature: 834
Protein sequence:
>835_residues MSSHAVSFEPAAVLASSARTVVHKFGGTSVADAERYRHVAQLLLARDETVQVTVVSAMKGVTDALIELAELAAKNRPEWR ERWHETRARHRGAAVALLGEHSGPTVEWLDERFAHLSQILGALAVIGELPREVLDRVQGLGEVYSAQLLGDHFRAIGEDC AVLDARDVLVVNRGELGVDVDWEASAQRLATWRQAHPQTRVVVTGFVARDRADRVTTLGRNGSDYSGAIFAALFDADELH IWTDVDGVLSADPRVVPEAVQLETLSYDEACELAYFGAKVVHPQTMSPAIERGLPIIIRNTFQPEHPGTRITASSAVSGP IKGLTLSPDLAVLNLEGTGLIGVPGTAERVFAALRTAQVSVVMISQGSSEHSICCVVKQHESERARNALLQAFAHELTVG QVQRVQLTTGISVLAAVGDGMAGQPGVAARLFESLGRAQVNILAIAQGSSERNISVAIDAAHATKALRAAHAGFWLSPQT FSVGVIGPGNVGAALLDQLRNAQPQLLGKANLDLRLRAVVSRGRMLLDERGLVGDWRDAFASSATPTDLERFTTHLLSAH LPHTVIIDCSGSAEVADRYAGWLAAGIHVVTPNKQAGSGPLARYEAIRAAADASGARFRYEATVGAGLPVITTLRDLVDT GDAVTSIEGIFSGTLAWLFNKYEGSVPFAELVTQARGMGYTEPDPRDDLSGVDVARKLVILAREAGRSISLEDVQVESLV PEALRQASVDDFMARLPEVDASFAQRLAQAHARGNVLRYVAQLPPDRAPSVGLVELPADHAFANLRLTDNVVQFTTRRYC ENPLVVQGPGAGPEVTAAGVFADLLRVAAGEGARL
Sequences:
>Translated_835_residues MSSHAVSFEPAAVLASSARTVVHKFGGTSVADAERYRHVAQLLLARDETVQVTVVSAMKGVTDALIELAELAAKNRPEWR ERWHETRARHRGAAVALLGEHSGPTVEWLDERFAHLSQILGALAVIGELPREVLDRVQGLGEVYSAQLLGDHFRAIGEDC AVLDARDVLVVNRGELGVDVDWEASAQRLATWRQAHPQTRVVVTGFVARDRADRVTTLGRNGSDYSGAIFAALFDADELH IWTDVDGVLSADPRVVPEAVQLETLSYDEACELAYFGAKVVHPQTMSPAIERGLPIIIRNTFQPEHPGTRITASSAVSGP IKGLTLSPDLAVLNLEGTGLIGVPGTAERVFAALRTAQVSVVMISQGSSEHSICCVVKQHESERARNALLQAFAHELTVG QVQRVQLTTGISVLAAVGDGMAGQPGVAARLFESLGRAQVNILAIAQGSSERNISVAIDAAHATKALRAAHAGFWLSPQT FSVGVIGPGNVGAALLDQLRNAQPQLLGKANLDLRLRAVVSRGRMLLDERGLVGDWRDAFASSATPTDLERFTTHLLSAH LPHTVIIDCSGSAEVADRYAGWLAAGIHVVTPNKQAGSGPLARYEAIRAAADASGARFRYEATVGAGLPVITTLRDLVDT GDAVTSIEGIFSGTLAWLFNKYEGSVPFAELVTQARGMGYTEPDPRDDLSGVDVARKLVILAREAGRSISLEDVQVESLV PEALRQASVDDFMARLPEVDASFAQRLAQAHARGNVLRYVAQLPPDRAPSVGLVELPADHAFANLRLTDNVVQFTTRRYC ENPLVVQGPGAGPEVTAAGVFADLLRVAAGEGARL >Mature_834_residues SSHAVSFEPAAVLASSARTVVHKFGGTSVADAERYRHVAQLLLARDETVQVTVVSAMKGVTDALIELAELAAKNRPEWRE RWHETRARHRGAAVALLGEHSGPTVEWLDERFAHLSQILGALAVIGELPREVLDRVQGLGEVYSAQLLGDHFRAIGEDCA VLDARDVLVVNRGELGVDVDWEASAQRLATWRQAHPQTRVVVTGFVARDRADRVTTLGRNGSDYSGAIFAALFDADELHI WTDVDGVLSADPRVVPEAVQLETLSYDEACELAYFGAKVVHPQTMSPAIERGLPIIIRNTFQPEHPGTRITASSAVSGPI KGLTLSPDLAVLNLEGTGLIGVPGTAERVFAALRTAQVSVVMISQGSSEHSICCVVKQHESERARNALLQAFAHELTVGQ VQRVQLTTGISVLAAVGDGMAGQPGVAARLFESLGRAQVNILAIAQGSSERNISVAIDAAHATKALRAAHAGFWLSPQTF SVGVIGPGNVGAALLDQLRNAQPQLLGKANLDLRLRAVVSRGRMLLDERGLVGDWRDAFASSATPTDLERFTTHLLSAHL PHTVIIDCSGSAEVADRYAGWLAAGIHVVTPNKQAGSGPLARYEAIRAAADASGARFRYEATVGAGLPVITTLRDLVDTG DAVTSIEGIFSGTLAWLFNKYEGSVPFAELVTQARGMGYTEPDPRDDLSGVDVARKLVILAREAGRSISLEDVQVESLVP EALRQASVDDFMARLPEVDASFAQRLAQAHARGNVLRYVAQLPPDRAPSVGLVELPADHAFANLRLTDNVVQFTTRRYCE NPLVVQGPGAGPEVTAAGVFADLLRVAAGEGARL
Specific function: Catalyzes 2 nonconsecutive reactions in the common biosynthetic pathway leading from Asp to diaminopimelate and Lys, to Met, and to Thr and Ile. [C]
COG id: COG0527
COG function: function code E; Aspartokinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ACT domains [H]
Homologues:
Organism=Escherichia coli, GI1786183, Length=812, Percent_Identity=40.3940886699507, Blast_Score=555, Evalue=1e-159, Organism=Escherichia coli, GI1790376, Length=810, Percent_Identity=34.5679012345679, Blast_Score=389, Evalue=1e-109, Organism=Escherichia coli, GI1790455, Length=461, Percent_Identity=29.5010845986985, Blast_Score=152, Evalue=1e-37, Organism=Saccharomyces cerevisiae, GI6322599, Length=363, Percent_Identity=40.2203856749311, Blast_Score=224, Evalue=5e-59, Organism=Saccharomyces cerevisiae, GI6320893, Length=512, Percent_Identity=26.3671875, Blast_Score=147, Evalue=5e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR001048 - InterPro: IPR005106 - InterPro: IPR001341 - InterPro: IPR018042 - InterPro: IPR011147 - InterPro: IPR001342 - InterPro: IPR019811 - InterPro: IPR016040 [H]
Pfam domain/function: PF00696 AA_kinase; PF01842 ACT; PF00742 Homoserine_dh; PF03447 NAD_binding_3 [H]
EC number: =2.7.2.4; =1.1.1.3 [H]
Molecular weight: Translated: 89137; Mature: 89006
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: PS01042 HOMOSER_DHGENASE ; PS00324 ASPARTOKINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSHAVSFEPAAVLASSARTVVHKFGGTSVADAERYRHVAQLLLARDETVQVTVVSAMKG CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEEEHHHHHHH VTDALIELAELAAKNRPEWRERWHETRARHRGAAVALLGEHSGPTVEWLDERFAHLSQIL HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHH GALAVIGELPREVLDRVQGLGEVYSAQLLGDHFRAIGEDCAVLDARDVLVVNRGELGVDV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCCCC DWEASAQRLATWRQAHPQTRVVVTGFVARDRADRVTTLGRNGSDYSGAIFAALFDADELH CCCHHHHHHHHHHHCCCCCEEEEEEEHHHCCHHHHHCCCCCCCCCCCEEEEEEECCCCEE IWTDVDGVLSADPRVVPEAVQLETLSYDEACELAYFGAKVVHPQTMSPAIERGLPIIIRN EEECCCCHHCCCCCCCCHHHEEEECCCCHHHHHHHHCCEEECCCCCCHHHHCCCEEEEEC TFQPEHPGTRITASSAVSGPIKGLTLSPDLAVLNLEGTGLIGVPGTAERVFAALRTAQVS CCCCCCCCCEEEECCCCCCCCCCEEECCCEEEEEECCCEEEECCCHHHHHHHHHHHHEEE VVMISQGSSEHSICCVVKQHESERARNALLQAFAHELTVGQVQRVQLTTGISVLAAVGDG EEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHCCC MAGQPGVAARLFESLGRAQVNILAIAQGSSERNISVAIDAAHATKALRAAHAGFWLSPQT CCCCCCHHHHHHHHHCCCEEEEEEEECCCCCCCEEEEEECHHHHHHHHHHHCCCEECCCC FSVGVIGPGNVGAALLDQLRNAQPQLLGKANLDLRLRAVVSRGRMLLDERGLVGDWRDAF EEEEEECCCCHHHHHHHHHHCCCCHHCCCCCCCEEHHHHHHCCHHEECCCCCCCCHHHHH ASSATPTDLERFTTHLLSAHLPHTVIIDCSGSAEVADRYAGWLAAGIHVVTPNKQAGSGP CCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCEEEECCCCCCCCCC LARYEAIRAAADASGARFRYEATVGAGLPVITTLRDLVDTGDAVTSIEGIFSGTLAWLFN HHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH KYEGSVPFAELVTQARGMGYTEPDPRDDLSGVDVARKLVILAREAGRSISLEDVQVESLV HCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH PEALRQASVDDFMARLPEVDASFAQRLAQAHARGNVLRYVAQLPPDRAPSVGLVELPADH HHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCEEEECCCC AFANLRLTDNVVQFTTRRYCENPLVVQGPGAGPEVTAAGVFADLLRVAAGEGARL CEEEEEECHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SSHAVSFEPAAVLASSARTVVHKFGGTSVADAERYRHVAQLLLARDETVQVTVVSAMKG CCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEEEHHHHHHH VTDALIELAELAAKNRPEWRERWHETRARHRGAAVALLGEHSGPTVEWLDERFAHLSQIL HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHH GALAVIGELPREVLDRVQGLGEVYSAQLLGDHFRAIGEDCAVLDARDVLVVNRGELGVDV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCCCC DWEASAQRLATWRQAHPQTRVVVTGFVARDRADRVTTLGRNGSDYSGAIFAALFDADELH CCCHHHHHHHHHHHCCCCCEEEEEEEHHHCCHHHHHCCCCCCCCCCCEEEEEEECCCCEE IWTDVDGVLSADPRVVPEAVQLETLSYDEACELAYFGAKVVHPQTMSPAIERGLPIIIRN EEECCCCHHCCCCCCCCHHHEEEECCCCHHHHHHHHCCEEECCCCCCHHHHCCCEEEEEC TFQPEHPGTRITASSAVSGPIKGLTLSPDLAVLNLEGTGLIGVPGTAERVFAALRTAQVS CCCCCCCCCEEEECCCCCCCCCCEEECCCEEEEEECCCEEEECCCHHHHHHHHHHHHEEE VVMISQGSSEHSICCVVKQHESERARNALLQAFAHELTVGQVQRVQLTTGISVLAAVGDG EEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHCCC MAGQPGVAARLFESLGRAQVNILAIAQGSSERNISVAIDAAHATKALRAAHAGFWLSPQT CCCCCCHHHHHHHHHCCCEEEEEEEECCCCCCCEEEEEECHHHHHHHHHHHCCCEECCCC FSVGVIGPGNVGAALLDQLRNAQPQLLGKANLDLRLRAVVSRGRMLLDERGLVGDWRDAF EEEEEECCCCHHHHHHHHHHCCCCHHCCCCCCCEEHHHHHHCCHHEECCCCCCCCHHHHH ASSATPTDLERFTTHLLSAHLPHTVIIDCSGSAEVADRYAGWLAAGIHVVTPNKQAGSGP CCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCEEEECCCCCCCCCC LARYEAIRAAADASGARFRYEATVGAGLPVITTLRDLVDTGDAVTSIEGIFSGTLAWLFN HHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH KYEGSVPFAELVTQARGMGYTEPDPRDDLSGVDVARKLVILAREAGRSISLEDVQVESLV HCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH PEALRQASVDDFMARLPEVDASFAQRLAQAHARGNVLRYVAQLPPDRAPSVGLVELPADH HHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCEEEECCCC AFANLRLTDNVVQFTTRRYCENPLVVQGPGAGPEVTAAGVFADLLRVAAGEGARL CEEEEEECHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8423151 [H]