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The map label for this gene is 21242476

Identifier: 21242476

GI number: 21242476

Start: 1987326

End: 1987940

Strand: Direct

Name: 21242476

Synonym: XAC1727

Alternate gene names: NA

Gene position: 1987326-1987940 (Clockwise)

Preceding gene: 21242475

Following gene: 21242477

Centisome position: 38.4

GC content: 65.69

Gene sequence:

>615_bases
ATGAAGATTTTTGGGCCGTTGTACGACGTGGCCATCCGTTGGTCGCGCCATCGCCGCGCACCCGCGCTGCTGACCGGTCT
CAGTTTCGTTGAGGGCTTCATCTTTCCGGTGCCGCCGGAAGTGATGTTGGCACCGATGTCGCTGGCCGAGCCCAAGCGCT
CGCTCTGGTTTGCGACCTTGAGCCTGATCGGCTCGATCTGCGGCGCCCTGGTCGGTTATCTACTCGGCCATTTCGCCTTC
GCCGCGCTGCAGCCGCTGATCGAATGGCTGGGCTGGAGCGCGAAGATCCAGCAGCAGATCGAAACCCTGCGCACGCTGGT
CGCCGATTCGCCGTGGAAGGCGTTCTGGGCGCTGGTCCTGGTCGGTTTCACCCCGATCCCGCTGAAGATCTTTACCTGGG
CCTCGGGCGTGGTCGGCGTGCCGATCCTGCCGTTCATCGCCAGCATGCTGGTCGGGCGCGGCAAGCGCGTGTATCTGGTG
GCCGGCGCGATCCGCCTGGGCGGTGCGCGCGCCGAAGCGGCGCTGCATCGCTGGATCGAGCCACTGGGCTGGGTTGCAAT
GGCGGTGCTGGCGGTCGGTGCGGGGTGGTTGGTGTGGAAGACAACGAACGGATGA

Upstream 100 bases:

>100_bases
CCGCGGGGCCGATGGCGCGATCGAACAACAGGTTCTGGCGCCGGTCACGTTCGTCCCGCTGTTGTCGGGCATGCTGGATT
GAATCCATGAGAGTCCTTCG

Downstream 100 bases:

>100_bases
GCAAGACGCAGATGAATTCGGCACGCAAGACAGCAGTCATGCTCGCAATCGCCATCGGGCTGACCGCCTGTAGCAGCGCA
ACGGTGGTGCGTTCGCCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MKIFGPLYDVAIRWSRHRRAPALLTGLSFVEGFIFPVPPEVMLAPMSLAEPKRSLWFATLSLIGSICGALVGYLLGHFAF
AALQPLIEWLGWSAKIQQQIETLRTLVADSPWKAFWALVLVGFTPIPLKIFTWASGVVGVPILPFIASMLVGRGKRVYLV
AGAIRLGGARAEAALHRWIEPLGWVAMAVLAVGAGWLVWKTTNG

Sequences:

>Translated_204_residues
MKIFGPLYDVAIRWSRHRRAPALLTGLSFVEGFIFPVPPEVMLAPMSLAEPKRSLWFATLSLIGSICGALVGYLLGHFAF
AALQPLIEWLGWSAKIQQQIETLRTLVADSPWKAFWALVLVGFTPIPLKIFTWASGVVGVPILPFIASMLVGRGKRVYLV
AGAIRLGGARAEAALHRWIEPLGWVAMAVLAVGAGWLVWKTTNG
>Mature_204_residues
MKIFGPLYDVAIRWSRHRRAPALLTGLSFVEGFIFPVPPEVMLAPMSLAEPKRSLWFATLSLIGSICGALVGYLLGHFAF
AALQPLIEWLGWSAKIQQQIETLRTLVADSPWKAFWALVLVGFTPIPLKIFTWASGVVGVPILPFIASMLVGRGKRVYLV
AGAIRLGGARAEAALHRWIEPLGWVAMAVLAVGAGWLVWKTTNG

Specific function: Unknown

COG id: COG1238

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 22287; Mature: 22287

Theoretical pI: Translated: 10.95; Mature: 10.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIFGPLYDVAIRWSRHRRAPALLTGLSFVEGFIFPVPPEVMLAPMSLAEPKRSLWFATL
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHCCCCHHCCHHHHHHHHHH
SLIGSICGALVGYLLGHFAFAALQPLIEWLGWSAKIQQQIETLRTLVADSPWKAFWALVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH
VGFTPIPLKIFTWASGVVGVPILPFIASMLVGRGKRVYLVAGAIRLGGARAEAALHRWIE
HCCCCCCHHEEHHCCCCCCCCHHHHHHHHHHCCCCEEEEEECHHHHCCHHHHHHHHHHHH
PLGWVAMAVLAVGAGWLVWKTTNG
HHHHHHHHHHHHCCCEEEEEECCC
>Mature Secondary Structure
MKIFGPLYDVAIRWSRHRRAPALLTGLSFVEGFIFPVPPEVMLAPMSLAEPKRSLWFATL
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHCCCCHHCCHHHHHHHHHH
SLIGSICGALVGYLLGHFAFAALQPLIEWLGWSAKIQQQIETLRTLVADSPWKAFWALVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH
VGFTPIPLKIFTWASGVVGVPILPFIASMLVGRGKRVYLVAGAIRLGGARAEAALHRWIE
HCCCCCCHHEEHHCCCCCCCCHHHHHHHHHHCCCCEEEEEECHHHHCCHHHHHHHHHHHH
PLGWVAMAVLAVGAGWLVWKTTNG
HHHHHHHHHHHHCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8478068 [H]