| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is sseA [H]
Identifier: 21242337
GI number: 21242337
Start: 1833030
End: 1833902
Strand: Direct
Name: sseA [H]
Synonym: XAC1587
Alternate gene names: 21242337
Gene position: 1833030-1833902 (Clockwise)
Preceding gene: 21242336
Following gene: 21242338
Centisome position: 35.42
GC content: 69.07
Gene sequence:
>873_bases ATGAGTGCCGATCCGAACTGGACCACGTTGGTCGATGCCGCCGTGCTGGCGGCCGCGTTGCAGCATCCGCAGCTGCGTCT GCTGGATGCGCGTGCCGCCCCACCGACCGCGCCAGACCCGCACGCAGCGCGCAAGGCGTACGCGCAGGGGCATCTGCCCG GCGCGTACTACGCCGATCTCGACCAAGACCTTGCAGCTCTTTCGCGGCCGGCGCAGGGGCGGCACCCGTTGCCGCACGGC GCGGCATTCGCCAAACGTCTGGGCGAATGGGGCATCGATCCGCACACCCAGGTCGTTGTCTACGACGCGGCCGATGGCAG CATGGCGGCTGCGCGCGCGTGGTGGATGTTGCGACTGATGGGGCATCGCCGGGTGGCGGTGCTGGACGGCGGCTTGGCCG CTTGGCGTGCTGCCGGGTTTGCGGAAAGCACCGAGTCACCTGCAGTGCGTGATGGCGCAGCGTATCCCGGCAGTTTCGAT ACCGCCGAGGTCGTGGATGCCGAGCAGATCGTGCAGCGACTGCAGCAGGCGCCGGGCTGGTTGCTGGACGCGCGGGCAGG CGAGCGTTTCCGTGGCGAAGTCGAGCCGATCGATCCGGTGGCCGGGCATGTGCCGGGTGCGGTGAATCGTCCGTTGGGGC TGAACCTGCGTGATGGTCGCTTCAAACCAGCTGCCGAACTGCGCGCCGAGTTGTCCGCGTTGCTGGGTGCGTACCGGCCC GAGCAGGCGGTGGTGATGTGCGGGTCGGGTGTCACGGCATGCCATCTGTTGCTGGCATTGGAAGTGGCCGGGTTATCAGG AGCGCGCGTCTACGCCGGTTCCTGGAGCGGTTGGCTGCAAGACGCCGCGCGGCCGGTCGCGACCGGCGCCTGA
Upstream 100 bases:
>100_bases GCCCGCGGCGCGTGCTCGAATACGACTGGCCTGCCCACCGCATCTGGGGCGCTACCGCCGCCATTCTTCTCAATCTTCGT CGTCGCCTGGAGCAGGTTGC
Downstream 100 bases:
>100_bases TTGCAGGCACAATGGCGGCAGGAACGGTGACCTGTGGGGACGCGGGTTCGCTGCGCGGAGCGCAGTTTCTTGCAGTGCTG GGTGAGCCATGCGGTTGCAG
Product: thiosulfate sulfurtransferase
Products: NA
Alternate protein names: MST; Rhodanese-like protein [H]
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MSADPNWTTLVDAAVLAAALQHPQLRLLDARAAPPTAPDPHAARKAYAQGHLPGAYYADLDQDLAALSRPAQGRHPLPHG AAFAKRLGEWGIDPHTQVVVYDAADGSMAAARAWWMLRLMGHRRVAVLDGGLAAWRAAGFAESTESPAVRDGAAYPGSFD TAEVVDAEQIVQRLQQAPGWLLDARAGERFRGEVEPIDPVAGHVPGAVNRPLGLNLRDGRFKPAAELRAELSALLGAYRP EQAVVMCGSGVTACHLLLALEVAGLSGARVYAGSWSGWLQDAARPVATGA
Sequences:
>Translated_290_residues MSADPNWTTLVDAAVLAAALQHPQLRLLDARAAPPTAPDPHAARKAYAQGHLPGAYYADLDQDLAALSRPAQGRHPLPHG AAFAKRLGEWGIDPHTQVVVYDAADGSMAAARAWWMLRLMGHRRVAVLDGGLAAWRAAGFAESTESPAVRDGAAYPGSFD TAEVVDAEQIVQRLQQAPGWLLDARAGERFRGEVEPIDPVAGHVPGAVNRPLGLNLRDGRFKPAAELRAELSALLGAYRP EQAVVMCGSGVTACHLLLALEVAGLSGARVYAGSWSGWLQDAARPVATGA >Mature_289_residues SADPNWTTLVDAAVLAAALQHPQLRLLDARAAPPTAPDPHAARKAYAQGHLPGAYYADLDQDLAALSRPAQGRHPLPHGA AFAKRLGEWGIDPHTQVVVYDAADGSMAAARAWWMLRLMGHRRVAVLDGGLAAWRAAGFAESTESPAVRDGAAYPGSFDT AEVVDAEQIVQRLQQAPGWLLDARAGERFRGEVEPIDPVAGHVPGAVNRPLGLNLRDGRFKPAAELRAELSALLGAYRPE QAVVMCGSGVTACHLLLALEVAGLSGARVYAGSWSGWLQDAARPVATGA
Specific function: Transfers a sulfur ion to cyanide or to other thiol compounds [H]
COG id: COG2897
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 rhodanese domains [H]
Homologues:
Organism=Homo sapiens, GI17402865, Length=287, Percent_Identity=35.5400696864112, Blast_Score=145, Evalue=3e-35, Organism=Homo sapiens, GI61835204, Length=286, Percent_Identity=37.0629370629371, Blast_Score=132, Evalue=3e-31, Organism=Homo sapiens, GI194473681, Length=286, Percent_Identity=37.0629370629371, Blast_Score=132, Evalue=3e-31, Organism=Homo sapiens, GI194473668, Length=284, Percent_Identity=36.9718309859155, Blast_Score=132, Evalue=3e-31, Organism=Escherichia coli, GI87082121, Length=281, Percent_Identity=33.4519572953737, Blast_Score=138, Evalue=4e-34, Organism=Caenorhabditis elegans, GI71997283, Length=279, Percent_Identity=29.0322580645161, Blast_Score=95, Evalue=5e-20, Organism=Caenorhabditis elegans, GI17561888, Length=267, Percent_Identity=27.7153558052434, Blast_Score=95, Evalue=5e-20, Organism=Saccharomyces cerevisiae, GI6324825, Length=252, Percent_Identity=29.3650793650794, Blast_Score=87, Evalue=2e-18,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001763 [H]
Pfam domain/function: PF00581 Rhodanese [H]
EC number: =2.8.1.2 [H]
Molecular weight: Translated: 30600; Mature: 30469
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSADPNWTTLVDAAVLAAALQHPQLRLLDARAAPPTAPDPHAARKAYAQGHLPGAYYADL CCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCHHHHHH DQDLAALSRPAQGRHPLPHGAAFAKRLGEWGIDPHTQVVVYDAADGSMAAARAWWMLRLM HHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHH GHRRVAVLDGGLAAWRAAGFAESTESPAVRDGAAYPGSFDTAEVVDAEQIVQRLQQAPGW CCCEEEEEECCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHCCCE LLDARAGERFRGEVEPIDPVAGHVPGAVNRPLGLNLRDGRFKPAAELRAELSALLGAYRP EEECCCCCHHCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC EQAVVMCGSGVTACHLLLALEVAGLSGARVYAGSWSGWLQDAARPVATGA CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHCCCCCCCC >Mature Secondary Structure SADPNWTTLVDAAVLAAALQHPQLRLLDARAAPPTAPDPHAARKAYAQGHLPGAYYADL CCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCHHHHHH DQDLAALSRPAQGRHPLPHGAAFAKRLGEWGIDPHTQVVVYDAADGSMAAARAWWMLRLM HHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHH GHRRVAVLDGGLAAWRAAGFAESTESPAVRDGAAYPGSFDTAEVVDAEQIVQRLQQAPGW CCCEEEEEECCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHCCCE LLDARAGERFRGEVEPIDPVAGHVPGAVNRPLGLNLRDGRFKPAAELRAELSALLGAYRP EEECCCCCHHCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC EQAVVMCGSGVTACHLLLALEVAGLSGARVYAGSWSGWLQDAARPVATGA CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]