| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21242338
Identifier: 21242338
GI number: 21242338
Start: 1834030
End: 1834944
Strand: Direct
Name: 21242338
Synonym: XAC1588
Alternate gene names: NA
Gene position: 1834030-1834944 (Clockwise)
Preceding gene: 21242337
Following gene: 21242340
Centisome position: 35.44
GC content: 67.65
Gene sequence:
>915_bases GTGTGGACGTTGGCTGCCTGTTCGGCGGAGTCGTCCGCCGATGTCAGCGATAGGCCTGCTGCCGGTCATCGAAATGCGGC GCAGCACGATGTGTACCAGGTCGCGCTGGAACAAGCGCGTGCGGAGCGGCTGAGGCAGCTGCGTGCGCCCGACGGGTGGT TGAGCTATACCGGTTCGGGGCGCGTGCGCGCCGGCCAGTACCGTGTGGGCAGCGACCCGCATAGCGATATCGTCCTGCCT GCCGGCCCTGCGCAGCTGGGGCAACTGACGTTGGATGCTGCAGGGCAGGTGCGCTTTCGCGCAGATGCCGCCGCGTCGGT GGCGCTCGATGGGCAGCGCGTCGATGAGGTGCGCCTGGAACCGGAGCGGGCAGGGCAGCGCGGCGACCGGCTGGACGTGG GTGGCCGGCAGTTCTATCTGGTGCAGACCGGCGCCTTGTACGGCTGGCGCTTCCGCGACCCGGCAGCGCCGGCGCTGACG CAGTTCGACGGGCTGGACTATTTCCCGACCGATCCGCAGTGGCGCATCCAGGCGCAGTGGCAACCCTATCCAACGCCGCG CACGACGACCTTGCTGACGTCGATCGGCACGCCGCTCACCGTGCAGGTGCCGGGAGAAGCGGTGTTCTCGCGCGATGGCC GCCAATACCGCTTGCGGCCGCTGCTGCAGGAAGATGGCCAGGGCCTGTTCTTCCTGTTCGCCGACCGCACCAGCGGCAAG GAAAGTTATGGCGGCGCGCGTTATCTGTTTGCCGCGTTGCCCCGCGATGGTCAGGTGGTCCTCGATTTCAATCTGGCCGA AAATCCGCCATGCGCGCTGACGCCCCATGTGGTCTGCCCCATCGCGCCGCCTGAAGACCGGTTGGACGTGGCAGTCAATG CCGGCGAGAAGACCTACCGTGCGACCGAACGTTGA
Upstream 100 bases:
>100_bases TGACCTGTGGGGACGCGGGTTCGCTGCGCGGAGCGCAGTTTCTTGCAGTGCTGGGTGAGCCATGCGGTTGCAGTTACGGG TTGGCGCGCTGTGCGTCGCG
Downstream 100 bases:
>100_bases GCGTGCTGCAACGGGTTGACGGTGCGCGAAGGAAGATGTTTTTCGGGTCATCAAAGCATCCGAGAGCTATCACGTGCGTG TTCTGCAGGCGACGCTGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MWTLAACSAESSADVSDRPAAGHRNAAQHDVYQVALEQARAERLRQLRAPDGWLSYTGSGRVRAGQYRVGSDPHSDIVLP AGPAQLGQLTLDAAGQVRFRADAAASVALDGQRVDEVRLEPERAGQRGDRLDVGGRQFYLVQTGALYGWRFRDPAAPALT QFDGLDYFPTDPQWRIQAQWQPYPTPRTTTLLTSIGTPLTVQVPGEAVFSRDGRQYRLRPLLQEDGQGLFFLFADRTSGK ESYGGARYLFAALPRDGQVVLDFNLAENPPCALTPHVVCPIAPPEDRLDVAVNAGEKTYRATER
Sequences:
>Translated_304_residues MWTLAACSAESSADVSDRPAAGHRNAAQHDVYQVALEQARAERLRQLRAPDGWLSYTGSGRVRAGQYRVGSDPHSDIVLP AGPAQLGQLTLDAAGQVRFRADAAASVALDGQRVDEVRLEPERAGQRGDRLDVGGRQFYLVQTGALYGWRFRDPAAPALT QFDGLDYFPTDPQWRIQAQWQPYPTPRTTTLLTSIGTPLTVQVPGEAVFSRDGRQYRLRPLLQEDGQGLFFLFADRTSGK ESYGGARYLFAALPRDGQVVLDFNLAENPPCALTPHVVCPIAPPEDRLDVAVNAGEKTYRATER >Mature_304_residues MWTLAACSAESSADVSDRPAAGHRNAAQHDVYQVALEQARAERLRQLRAPDGWLSYTGSGRVRAGQYRVGSDPHSDIVLP AGPAQLGQLTLDAAGQVRFRADAAASVALDGQRVDEVRLEPERAGQRGDRLDVGGRQFYLVQTGALYGWRFRDPAAPALT QFDGLDYFPTDPQWRIQAQWQPYPTPRTTTLLTSIGTPLTVQVPGEAVFSRDGRQYRLRPLLQEDGQGLFFLFADRTSGK ESYGGARYLFAALPRDGQVVLDFNLAENPPCALTPHVVCPIAPPEDRLDVAVNAGEKTYRATER
Specific function: Unknown
COG id: COG3358
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33378; Mature: 33378
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWTLAACSAESSADVSDRPAAGHRNAAQHDVYQVALEQARAERLRQLRAPDGWLSYTGSG CEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCC RVRAGQYRVGSDPHSDIVLPAGPAQLGQLTLDAAGQVRFRADAAASVALDGQRVDEVRLE CEEECCEECCCCCCCCEEEECCCHHHCEEEECCCCEEEEECCCCEEEEECCCCCCCEEEC PERAGQRGDRLDVGGRQFYLVQTGALYGWRFRDPAAPALTQFDGLDYFPTDPQWRIQAQW HHHCCCCCCEECCCCCEEEEEEECCEEEEEECCCCCCHHHHCCCCCCCCCCCCEEEEEEE QPYPTPRTTTLLTSIGTPLTVQVPGEAVFSRDGRQYRLRPLLQEDGQGLFFLFADRTSGK CCCCCCCCEEEEECCCCCEEEEECCCCEECCCCCEEEECCHHHCCCCEEEEEEEECCCCC ESYGGARYLFAALPRDGQVVLDFNLAENPPCALTPHVVCPIAPPEDRLDVAVNAGEKTYR CCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCEEEECCCCCCCEEEEEECCCCCEE ATER CCCC >Mature Secondary Structure MWTLAACSAESSADVSDRPAAGHRNAAQHDVYQVALEQARAERLRQLRAPDGWLSYTGSG CEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCC RVRAGQYRVGSDPHSDIVLPAGPAQLGQLTLDAAGQVRFRADAAASVALDGQRVDEVRLE CEEECCEECCCCCCCCEEEECCCHHHCEEEECCCCEEEEECCCCEEEEECCCCCCCEEEC PERAGQRGDRLDVGGRQFYLVQTGALYGWRFRDPAAPALTQFDGLDYFPTDPQWRIQAQW HHHCCCCCCEECCCCCEEEEEEECCEEEEEECCCCCCHHHHCCCCCCCCCCCCEEEEEEE QPYPTPRTTTLLTSIGTPLTVQVPGEAVFSRDGRQYRLRPLLQEDGQGLFFLFADRTSGK CCCCCCCCEEEEECCCCCEEEEECCCCEECCCCCEEEECCHHHCCCCEEEEEEEECCCCC ESYGGARYLFAALPRDGQVVLDFNLAENPPCALTPHVVCPIAPPEDRLDVAVNAGEKTYR CCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCEEEECCCCCCCEEEEEECCCCCEE ATER CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA