Click here to switch to the map view.

The map label for this gene is nudL [H]

Identifier: 21242336

GI number: 21242336

Start: 1832398

End: 1833033

Strand: Direct

Name: nudL [H]

Synonym: XAC1586

Alternate gene names: 21242336

Gene position: 1832398-1833033 (Clockwise)

Preceding gene: 21242335

Following gene: 21242337

Centisome position: 35.4

GC content: 67.61

Gene sequence:

>636_bases
GTGCTGCCCGCACGCGCGCTGACGGCACGCCTGCCCGAATACGCGCAGTTGAGGCGGGCGCTGTATCCGCTGGACACCGC
GCCGGCCGGGCCGGGTTGGAACCATGCCGAGCTGATCGACCTGACCGACGGCGACGCGTCTGCCGAAGCGGCGGTGCTGT
GCGGGCTGGTGCCGCGGGAGCAGGGAACGACGGTGTTGCTGACGCGGCGTACGGACAGCTTGCGCCATCACGCCGGGCAG
GTCAGCTTCCCTGGCGGACGGATGGAGCCGTCCGATGCCGACGCCGCCGCTGCAGCGCTGCGCGAGAGTTGCGAAGAAAT
TGCGCTGGGTGCGCAGCAGGTGCATGCCATCGGATACCTGGATCCGTTTCTGACCGTCAGTGGATTTCGAGTGACGCCCG
TGGTGGCGGTCATCGCCCCGGGGTTCGTGGCGGTGCCGCAGCCGGATGAAGTGGCGGACGTCTTCGAAGTGCCGCTGGGC
TATCTGATGGACCCGAACAATCTACGCAGTGTGGAACTGGAATTCCGCGGGCGCCCGCGGCGCGTGCTCGAATACGACTG
GCCTGCCCACCGCATCTGGGGCGCTACCGCCGCCATTCTTCTCAATCTTCGTCGTCGCCTGGAGCAGGTTGCATGA

Upstream 100 bases:

>100_bases
GGACGCGCAGTCGCACTGCGTCGGCTGTTTGCGCAGCCTGGATGAAATTGCACGCTGGATGAGCATGAGCGACGCCGAAC
GCCAGGACTATCTGCACACG

Downstream 100 bases:

>100_bases
GTGCCGATCCGAACTGGACCACGTTGGTCGATGCCGCCGTGCTGGCGGCCGCGTTGCAGCATCCGCAGCTGCGTCTGCTG
GATGCGCGTGCCGCCCCACC

Product: MutT-nudix family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MLPARALTARLPEYAQLRRALYPLDTAPAGPGWNHAELIDLTDGDASAEAAVLCGLVPREQGTTVLLTRRTDSLRHHAGQ
VSFPGGRMEPSDADAAAAALRESCEEIALGAQQVHAIGYLDPFLTVSGFRVTPVVAVIAPGFVAVPQPDEVADVFEVPLG
YLMDPNNLRSVELEFRGRPRRVLEYDWPAHRIWGATAAILLNLRRRLEQVA

Sequences:

>Translated_211_residues
MLPARALTARLPEYAQLRRALYPLDTAPAGPGWNHAELIDLTDGDASAEAAVLCGLVPREQGTTVLLTRRTDSLRHHAGQ
VSFPGGRMEPSDADAAAAALRESCEEIALGAQQVHAIGYLDPFLTVSGFRVTPVVAVIAPGFVAVPQPDEVADVFEVPLG
YLMDPNNLRSVELEFRGRPRRVLEYDWPAHRIWGATAAILLNLRRRLEQVA
>Mature_211_residues
MLPARALTARLPEYAQLRRALYPLDTAPAGPGWNHAELIDLTDGDASAEAAVLCGLVPREQGTTVLLTRRTDSLRHHAGQ
VSFPGGRMEPSDADAAAAALRESCEEIALGAQQVHAIGYLDPFLTVSGFRVTPVVAVIAPGFVAVPQPDEVADVFEVPLG
YLMDPNNLRSVELEFRGRPRRVLEYDWPAHRIWGATAAILLNLRRRLEQVA

Specific function: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives [H]

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI157785656, Length=116, Percent_Identity=43.9655172413793, Blast_Score=94, Evalue=7e-20,
Organism=Escherichia coli, GI1788115, Length=155, Percent_Identity=42.5806451612903, Blast_Score=89, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17536993, Length=167, Percent_Identity=33.5329341317365, Blast_Score=80, Evalue=8e-16,
Organism=Drosophila melanogaster, GI18859683, Length=158, Percent_Identity=34.8101265822785, Blast_Score=70, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR000059 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 22963; Mature: 22963

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPARALTARLPEYAQLRRALYPLDTAPAGPGWNHAELIDLTDGDASAEAAVLCGLVPRE
CCCCHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHCCCCCCC
QGTTVLLTRRTDSLRHHAGQVSFPGGRMEPSDADAAAAALRESCEEIALGAQQVHAIGYL
CCCEEEEEECCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHCC
DPFLTVSGFRVTPVVAVIAPGFVAVPQPDEVADVFEVPLGYLMDPNNLRSVELEFRGRPR
CHHHHCCCCCHHHHHHHHCCCEEECCCCHHHHHHHHCCHHHEECCCCCEEEEEEECCCCC
RVLEYDWPAHRIWGATAAILLNLRRRLEQVA
EEEECCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLPARALTARLPEYAQLRRALYPLDTAPAGPGWNHAELIDLTDGDASAEAAVLCGLVPRE
CCCCHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHCCCCCCC
QGTTVLLTRRTDSLRHHAGQVSFPGGRMEPSDADAAAAALRESCEEIALGAQQVHAIGYL
CCCEEEEEECCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHCC
DPFLTVSGFRVTPVVAVIAPGFVAVPQPDEVADVFEVPLGYLMDPNNLRSVELEFRGRPR
CHHHHCCCCCHHHHHHHHCCCEEECCCCHHHHHHHHCCHHHEECCCCCEEEEEEECCCCC
RVLEYDWPAHRIWGATAAILLNLRRRLEQVA
EEEECCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14528314 [H]