| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is mmuM [H]
Identifier: 21242145
GI number: 21242145
Start: 1602171
End: 1603136
Strand: Direct
Name: mmuM [H]
Synonym: XAC1392
Alternate gene names: 21242145
Gene position: 1602171-1603136 (Clockwise)
Preceding gene: 21242144
Following gene: 77748584
Centisome position: 30.96
GC content: 67.39
Gene sequence:
>966_bases ATGACGATTCTTCCGCGCCAGCCGCGCGCCAATGCGCCTTTCAGCCAGGCCCTGCAACACGACGGGTATGTGGTGCTGGA TGGCGCGCTGGCCACCGAGCTGGAGCAGCGCGGCTGCGATCTCAACGATGCGCTGTGGTCGGCGCGCGTGCTGATGGAGC AGCCGGAGCTGATCTATCAGGTGCATCGCGATTACTTCGCTGCCGGTGCGCAATGCGCGATCACCGCCAGTTATCAGGCC ACGCCGCTGGGATTTGCCGCACGCGGACTGGATGTTGCGCAAGCGCAGGCGTTGATCGCTCGCAGCGTAGCGCTGGCGAT GCAGGCGCGTGCCGATCATCTGACGCTGCACCCGCATGCCGCGCCTTTGTGGGTGGCAGGCTCGGTGGGACCGTATGGCG CGTATCTGGCCGATGGCTCGGAATATCGTGGCGACTACGTGCTGCCGATCGAGCAGTTGATGGACTTTCATCGTCCGCGC ATCGCGGCGCTGGCTGAGGCTGGCGTGGATCTGCTGGCCTGCGAGACGCTGCCCTCGGCCAGCGAAATCGTGGCCCTGCG GCAGTTGCTGCAACACGAATTTCCGCAGCTGCATGCCTGGTTTTCCTTCACCTTGCGCGATGCGGCGCATCTGAGCGACG GCACGCCGCTGGCGCAGGTGGTGCCGGCGCTGGATGCCTGTGCGCAGGTGATCGCGGTGGGCATCAACTGCATTGCGCTG GATCAGGCGACCGCTGCATTGCACAGCCTGTCGGCGCTGACCGCGCTGCCGCTGGTGGTATACCCGAACTCGGGCGAGCA CTACGACGCCAGCGACAAGCGCTGGCATGCCGGTCGCGGGGCTGCGCTCACGCTGGCCGACCAGCATGCGCACTGGCTGG CGGCTGGCGCGCGCTTGATCGGTGGCTGCTGCCGCACCGCACCGCGCGATATCGCCGCGCTGGCGGCCGCGCGTGCGGCG GAGTGA
Upstream 100 bases:
>100_bases CGCAGCAGCGCATTGCGTTGTGGTGCGGTATTCCGTTCGTCGCGCTGTGCTATGGCGCCTACGCACTTACCCAATGGCTT GCGGCCCGGAGACTGTACGC
Downstream 100 bases:
>100_bases CTCGGCTGACGAACGCGCGCTCACCCCGCGTGTCACACCCGGCCGGCATCGTTGGGATTGCCACCGCAGCATGCAAAGGG CGAGCCGAAGCCGGGCTTTG
Product: homocysteine methyltransferase
Products: NA
Alternate protein names: S-methylmethionine:homocysteine methyltransferase [H]
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MTILPRQPRANAPFSQALQHDGYVVLDGALATELEQRGCDLNDALWSARVLMEQPELIYQVHRDYFAAGAQCAITASYQA TPLGFAARGLDVAQAQALIARSVALAMQARADHLTLHPHAAPLWVAGSVGPYGAYLADGSEYRGDYVLPIEQLMDFHRPR IAALAEAGVDLLACETLPSASEIVALRQLLQHEFPQLHAWFSFTLRDAAHLSDGTPLAQVVPALDACAQVIAVGINCIAL DQATAALHSLSALTALPLVVYPNSGEHYDASDKRWHAGRGAALTLADQHAHWLAAGARLIGGCCRTAPRDIAALAAARAA E
Sequences:
>Translated_321_residues MTILPRQPRANAPFSQALQHDGYVVLDGALATELEQRGCDLNDALWSARVLMEQPELIYQVHRDYFAAGAQCAITASYQA TPLGFAARGLDVAQAQALIARSVALAMQARADHLTLHPHAAPLWVAGSVGPYGAYLADGSEYRGDYVLPIEQLMDFHRPR IAALAEAGVDLLACETLPSASEIVALRQLLQHEFPQLHAWFSFTLRDAAHLSDGTPLAQVVPALDACAQVIAVGINCIAL DQATAALHSLSALTALPLVVYPNSGEHYDASDKRWHAGRGAALTLADQHAHWLAAGARLIGGCCRTAPRDIAALAAARAA E >Mature_320_residues TILPRQPRANAPFSQALQHDGYVVLDGALATELEQRGCDLNDALWSARVLMEQPELIYQVHRDYFAAGAQCAITASYQAT PLGFAARGLDVAQAQALIARSVALAMQARADHLTLHPHAAPLWVAGSVGPYGAYLADGSEYRGDYVLPIEQLMDFHRPRI AALAEAGVDLLACETLPSASEIVALRQLLQHEFPQLHAWFSFTLRDAAHLSDGTPLAQVVPALDACAQVIAVGINCIALD QATAALHSLSALTALPLVVYPNSGEHYDASDKRWHAGRGAALTLADQHAHWLAAGARLIGGCCRTAPRDIAALAAARAAE
Specific function: Catalyzes methyl transfer from S-methylmethionine or S- adenosylmethionine (less efficient) to homocysteine, selenohomocysteine and less efficiently selenocysteine [H]
COG id: COG2040
COG function: function code E; Homocysteine/selenocysteine methylase (S-methylmethionine-dependent)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Hcy-binding domain [H]
Homologues:
Organism=Homo sapiens, GI169790923, Length=327, Percent_Identity=24.4648318042813, Blast_Score=71, Evalue=2e-12, Organism=Escherichia coli, GI1786456, Length=306, Percent_Identity=64.7058823529412, Blast_Score=380, Evalue=1e-107, Organism=Escherichia coli, GI1790450, Length=328, Percent_Identity=27.4390243902439, Blast_Score=74, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17569783, Length=158, Percent_Identity=31.0126582278481, Blast_Score=67, Evalue=9e-12, Organism=Saccharomyces cerevisiae, GI6322966, Length=324, Percent_Identity=28.3950617283951, Blast_Score=143, Evalue=3e-35, Organism=Saccharomyces cerevisiae, GI6324982, Length=320, Percent_Identity=26.5625, Blast_Score=129, Evalue=7e-31, Organism=Saccharomyces cerevisiae, GI6323983, Length=86, Percent_Identity=41.8604651162791, Blast_Score=77, Evalue=5e-15, Organism=Drosophila melanogaster, GI20129603, Length=317, Percent_Identity=36.9085173501577, Blast_Score=174, Evalue=7e-44, Organism=Drosophila melanogaster, GI24585077, Length=289, Percent_Identity=35.6401384083045, Blast_Score=171, Evalue=6e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003726 [H]
Pfam domain/function: PF02574 S-methyl_trans [H]
EC number: =2.1.1.10 [H]
Molecular weight: Translated: 34212; Mature: 34081
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: PS50970 HCY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTILPRQPRANAPFSQALQHDGYVVLDGALATELEQRGCDLNDALWSARVLMEQPELIYQ CCCCCCCCCCCCCHHHHHHCCCEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHH VHRDYFAAGAQCAITASYQATPLGFAARGLDVAQAQALIARSVALAMQARADHLTLHPHA HHHHHHHCCCCEEEEECCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCC APLWVAGSVGPYGAYLADGSEYRGDYVLPIEQLMDFHRPRIAALAEAGVDLLACETLPSA CCEEEECCCCCCCCEECCCCCCCCCEEEEHHHHHHHCCCHHHHHHHCCCCEEEECCCCCH SEIVALRQLLQHEFPQLHAWFSFTLRDAAHLSDGTPLAQVVPALDACAQVIAVGINCIAL HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEE DQATAALHSLSALTALPLVVYPNSGEHYDASDKRWHAGRGAALTLADQHAHWLAAGARLI HHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCEECCCCCEEEEECHHHHHHHHHHHHH GGCCRTAPRDIAALAAARAAE HHHHCCCHHHHHHHHHHHCCC >Mature Secondary Structure TILPRQPRANAPFSQALQHDGYVVLDGALATELEQRGCDLNDALWSARVLMEQPELIYQ CCCCCCCCCCCCHHHHHHCCCEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHH VHRDYFAAGAQCAITASYQATPLGFAARGLDVAQAQALIARSVALAMQARADHLTLHPHA HHHHHHHCCCCEEEEECCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCC APLWVAGSVGPYGAYLADGSEYRGDYVLPIEQLMDFHRPRIAALAEAGVDLLACETLPSA CCEEEECCCCCCCCEECCCCCCCCCEEEEHHHHHHHCCCHHHHHHHCCCCEEEECCCCCH SEIVALRQLLQHEFPQLHAWFSFTLRDAAHLSDGTPLAQVVPALDACAQVIAVGINCIAL HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEE DQATAALHSLSALTALPLVVYPNSGEHYDASDKRWHAGRGAALTLADQHAHWLAAGARLI HHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCEECCCCCEEEEECHHHHHHHHHHHHH GGCCRTAPRDIAALAAARAAE HHHHCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503; 9882684; 10026151 [H]