| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 77748584
Identifier: 77748584
GI number: 77748584
Start: 1607429
End: 1608790
Strand: Direct
Name: 77748584
Synonym: XAC1396
Alternate gene names: NA
Gene position: 1607429-1608790 (Clockwise)
Preceding gene: 21242145
Following gene: 21242151
Centisome position: 31.06
GC content: 66.52
Gene sequence:
>1362_bases GTGCTCGCCAAATTCCTCAAAGCCGCCTTGCTCGGTGTCTGCATCCTGATCGCAGCAGCGCTGGCGCTCTATGCGATCTC CAGGTATTGGCCGATTCCCGAATCGCAGCGTCAGGCGTTGGCGCAGCTGCGCCAGCCGCTTCCACCGTTGCGCGGGAGCA ACATGTTCGGGGCGCTGTGGTCGCTGTCGTACGCGATTCCGGAGGCGCAGCGCGAGGCAGTGCTGGCCCAGGACGTGGAG CGATTCAACCGGCTGCCGGAGCATGCGGCATTCCAAAGCGCCGCTGCAGGCTATCGGCGCCTGCCGGGTTGGCCGTCCGG CGCGCCTGCGCTGTGCATGGCCAGCGCTGGCGGATGCTTGCAGCGCGTGCGCGAACGACCGCAGGCCTATGCCGCTGCGC TGGCAGCACAGGCACCGATGCTGGCGCGGATGCGGGCGTTGGCGCAACACGCCGACTACCGCAGCCCGTTCCGTGCACGT GTCGATACGCCGCTTCCCGAACTGCCGCGCATGTCCTTGTCGATGACGACCAGCGCCTTGGAGTTTGTCCAGGGGCGCAC CACCCAGGCCTTGTCCGGGGTCTGCACCGATGCGCAGGTTGCCCGTGTACTGATGCGCAGTAGCGACAATCTGGCGATCA CGATGATTGGCGCGGCGATGCTGCGCGGCAATGCGCACCTGTTTGCCGACATGCTGGCCGAATTGCCGGCGCAGCATCCC TTGCCCGCGCAATGCGCCGCTGCATTTGCGCCGCTGCCGGTGGATGAGATCGCGCTGTGTCACGCGTTGCACGGTGAATC GCGGATGGTGTTTTCGATGCTGCAGGAGGATGCGTTGACGCGAGGCAGCCAATCGTCCTGGCAAGACCGGTTCCCGCTAC GGTTGCTGGACGACGAACGCACCCAGGCCTTGCTGGCGCCCACCTTTACCTGGGCCTGCAGCGCGCCGGTGCGGACCTTG CTGGCACAAGATCAGCCGGTTCCGCAGACGCTGATCCCGTTGCCGCAGACCGCATCGGTGGCCTGCATCGCCAATGCAAC CGGGTGTTTGCTGGCAAGCGTGTCGCGTCCGGACTACGCCAACTATCAGCGCAAGATGCAGGACGCCGCCGCTGCATTGC GCGCGCTGTCTGCGCTGCAGTGGTTGCGCGATCATCCTGCGCAGACAATGCCGCTGACGCAGCGGATCGCCGCGCTACCG CCTGCGTTGCGTGGACAGGTGCGCCCGCTAGGCGCCGGAAACGACGGTAAGAGCCTGACGCTTCGGCAGTACGCACGACC GGAGGGCGGGGCAGGCAATGATCGCTGGCCCGTGCCAGGCAGTGCGATCGCGGCCACACAGGCAGCCTCATCGGCTCGAT AA
Upstream 100 bases:
>100_bases GATGGTGCGCAGCCCAAAAGAACGCAATGCGTCTGTGCCCGTCGCGGGCCTGTGCCGATGGCACTAAGATGCGCAGCTCC CAGGGATGGATCGTTCGCAC
Downstream 100 bases:
>100_bases AACAAGCCGCCTTCTGCACTGCCAGGCACAGGTCGCAAGACTGGTGCAGGCGGTCTACGCTTGCATGCGCAACGCTGGTA TCCGCAGCAGCTGCCTGACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 453; Mature: 453
Protein sequence:
>453_residues MLAKFLKAALLGVCILIAAALALYAISRYWPIPESQRQALAQLRQPLPPLRGSNMFGALWSLSYAIPEAQREAVLAQDVE RFNRLPEHAAFQSAAAGYRRLPGWPSGAPALCMASAGGCLQRVRERPQAYAAALAAQAPMLARMRALAQHADYRSPFRAR VDTPLPELPRMSLSMTTSALEFVQGRTTQALSGVCTDAQVARVLMRSSDNLAITMIGAAMLRGNAHLFADMLAELPAQHP LPAQCAAAFAPLPVDEIALCHALHGESRMVFSMLQEDALTRGSQSSWQDRFPLRLLDDERTQALLAPTFTWACSAPVRTL LAQDQPVPQTLIPLPQTASVACIANATGCLLASVSRPDYANYQRKMQDAAAALRALSALQWLRDHPAQTMPLTQRIAALP PALRGQVRPLGAGNDGKSLTLRQYARPEGGAGNDRWPVPGSAIAATQAASSAR
Sequences:
>Translated_453_residues MLAKFLKAALLGVCILIAAALALYAISRYWPIPESQRQALAQLRQPLPPLRGSNMFGALWSLSYAIPEAQREAVLAQDVE RFNRLPEHAAFQSAAAGYRRLPGWPSGAPALCMASAGGCLQRVRERPQAYAAALAAQAPMLARMRALAQHADYRSPFRAR VDTPLPELPRMSLSMTTSALEFVQGRTTQALSGVCTDAQVARVLMRSSDNLAITMIGAAMLRGNAHLFADMLAELPAQHP LPAQCAAAFAPLPVDEIALCHALHGESRMVFSMLQEDALTRGSQSSWQDRFPLRLLDDERTQALLAPTFTWACSAPVRTL LAQDQPVPQTLIPLPQTASVACIANATGCLLASVSRPDYANYQRKMQDAAAALRALSALQWLRDHPAQTMPLTQRIAALP PALRGQVRPLGAGNDGKSLTLRQYARPEGGAGNDRWPVPGSAIAATQAASSAR >Mature_453_residues MLAKFLKAALLGVCILIAAALALYAISRYWPIPESQRQALAQLRQPLPPLRGSNMFGALWSLSYAIPEAQREAVLAQDVE RFNRLPEHAAFQSAAAGYRRLPGWPSGAPALCMASAGGCLQRVRERPQAYAAALAAQAPMLARMRALAQHADYRSPFRAR VDTPLPELPRMSLSMTTSALEFVQGRTTQALSGVCTDAQVARVLMRSSDNLAITMIGAAMLRGNAHLFADMLAELPAQHP LPAQCAAAFAPLPVDEIALCHALHGESRMVFSMLQEDALTRGSQSSWQDRFPLRLLDDERTQALLAPTFTWACSAPVRTL LAQDQPVPQTLIPLPQTASVACIANATGCLLASVSRPDYANYQRKMQDAAAALRALSALQWLRDHPAQTMPLTQRIAALP PALRGQVRPLGAGNDGKSLTLRQYARPEGGAGNDRWPVPGSAIAATQAASSAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48760; Mature: 48760
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAKFLKAALLGVCILIAAALALYAISRYWPIPESQRQALAQLRQPLPPLRGSNMFGALW CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHH SLSYAIPEAQREAVLAQDVERFNRLPEHAAFQSAAAGYRRLPGWPSGAPALCMASAGGCL HHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHH QRVRERPQAYAAALAAQAPMLARMRALAQHADYRSPFRARVDTPLPELPRMSLSMTTSAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCHHHHHHHHH EFVQGRTTQALSGVCTDAQVARVLMRSSDNLAITMIGAAMLRGNAHLFADMLAELPAQHP HHHHCCHHHHHHHCCCHHHHHHHHHHCCCCEEEEEHHHHHHHCCHHHHHHHHHHCCCCCC LPAQCAAAFAPLPVDEIALCHALHGESRMVFSMLQEDALTRGSQSSWQDRFPLRLLDDER CCHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHCCCCCEEECCHH TQALLAPTFTWACSAPVRTLLAQDQPVPQTLIPLPQTASVACIANATGCLLASVSRPDYA HHHHHCCCHHHHCCHHHHHHHHCCCCCCHHHCCCCCCCCEEEECCCHHHHHEECCCCCHH NYQRKMQDAAAALRALSALQWLRDHPAQTMPLTQRIAALPPALRGQVRPLGAGNDGKSLT HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHCCCCCCCCCCCCCCCEE LRQYARPEGGAGNDRWPVPGSAIAATQAASSAR HHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCC >Mature Secondary Structure MLAKFLKAALLGVCILIAAALALYAISRYWPIPESQRQALAQLRQPLPPLRGSNMFGALW CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHH SLSYAIPEAQREAVLAQDVERFNRLPEHAAFQSAAAGYRRLPGWPSGAPALCMASAGGCL HHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHH QRVRERPQAYAAALAAQAPMLARMRALAQHADYRSPFRARVDTPLPELPRMSLSMTTSAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCHHHHHHHHH EFVQGRTTQALSGVCTDAQVARVLMRSSDNLAITMIGAAMLRGNAHLFADMLAELPAQHP HHHHCCHHHHHHHCCCHHHHHHHHHHCCCCEEEEEHHHHHHHCCHHHHHHHHHHCCCCCC LPAQCAAAFAPLPVDEIALCHALHGESRMVFSMLQEDALTRGSQSSWQDRFPLRLLDDER CCHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHCCCCCEEECCHH TQALLAPTFTWACSAPVRTLLAQDQPVPQTLIPLPQTASVACIANATGCLLASVSRPDYA HHHHHCCCHHHHCCHHHHHHHHCCCCCCHHHCCCCCCCCEEEECCCHHHHHEECCCCCHH NYQRKMQDAAAALRALSALQWLRDHPAQTMPLTQRIAALPPALRGQVRPLGAGNDGKSLT HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHCCCCCCCCCCCCCCCEE LRQYARPEGGAGNDRWPVPGSAIAATQAASSAR HHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA