Definition Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome.
Accession NC_003919
Length 5,175,554

Click here to switch to the map view.

The map label for this gene is 77748584

Identifier: 77748584

GI number: 77748584

Start: 1607429

End: 1608790

Strand: Direct

Name: 77748584

Synonym: XAC1396

Alternate gene names: NA

Gene position: 1607429-1608790 (Clockwise)

Preceding gene: 21242145

Following gene: 21242151

Centisome position: 31.06

GC content: 66.52

Gene sequence:

>1362_bases
GTGCTCGCCAAATTCCTCAAAGCCGCCTTGCTCGGTGTCTGCATCCTGATCGCAGCAGCGCTGGCGCTCTATGCGATCTC
CAGGTATTGGCCGATTCCCGAATCGCAGCGTCAGGCGTTGGCGCAGCTGCGCCAGCCGCTTCCACCGTTGCGCGGGAGCA
ACATGTTCGGGGCGCTGTGGTCGCTGTCGTACGCGATTCCGGAGGCGCAGCGCGAGGCAGTGCTGGCCCAGGACGTGGAG
CGATTCAACCGGCTGCCGGAGCATGCGGCATTCCAAAGCGCCGCTGCAGGCTATCGGCGCCTGCCGGGTTGGCCGTCCGG
CGCGCCTGCGCTGTGCATGGCCAGCGCTGGCGGATGCTTGCAGCGCGTGCGCGAACGACCGCAGGCCTATGCCGCTGCGC
TGGCAGCACAGGCACCGATGCTGGCGCGGATGCGGGCGTTGGCGCAACACGCCGACTACCGCAGCCCGTTCCGTGCACGT
GTCGATACGCCGCTTCCCGAACTGCCGCGCATGTCCTTGTCGATGACGACCAGCGCCTTGGAGTTTGTCCAGGGGCGCAC
CACCCAGGCCTTGTCCGGGGTCTGCACCGATGCGCAGGTTGCCCGTGTACTGATGCGCAGTAGCGACAATCTGGCGATCA
CGATGATTGGCGCGGCGATGCTGCGCGGCAATGCGCACCTGTTTGCCGACATGCTGGCCGAATTGCCGGCGCAGCATCCC
TTGCCCGCGCAATGCGCCGCTGCATTTGCGCCGCTGCCGGTGGATGAGATCGCGCTGTGTCACGCGTTGCACGGTGAATC
GCGGATGGTGTTTTCGATGCTGCAGGAGGATGCGTTGACGCGAGGCAGCCAATCGTCCTGGCAAGACCGGTTCCCGCTAC
GGTTGCTGGACGACGAACGCACCCAGGCCTTGCTGGCGCCCACCTTTACCTGGGCCTGCAGCGCGCCGGTGCGGACCTTG
CTGGCACAAGATCAGCCGGTTCCGCAGACGCTGATCCCGTTGCCGCAGACCGCATCGGTGGCCTGCATCGCCAATGCAAC
CGGGTGTTTGCTGGCAAGCGTGTCGCGTCCGGACTACGCCAACTATCAGCGCAAGATGCAGGACGCCGCCGCTGCATTGC
GCGCGCTGTCTGCGCTGCAGTGGTTGCGCGATCATCCTGCGCAGACAATGCCGCTGACGCAGCGGATCGCCGCGCTACCG
CCTGCGTTGCGTGGACAGGTGCGCCCGCTAGGCGCCGGAAACGACGGTAAGAGCCTGACGCTTCGGCAGTACGCACGACC
GGAGGGCGGGGCAGGCAATGATCGCTGGCCCGTGCCAGGCAGTGCGATCGCGGCCACACAGGCAGCCTCATCGGCTCGAT
AA

Upstream 100 bases:

>100_bases
GATGGTGCGCAGCCCAAAAGAACGCAATGCGTCTGTGCCCGTCGCGGGCCTGTGCCGATGGCACTAAGATGCGCAGCTCC
CAGGGATGGATCGTTCGCAC

Downstream 100 bases:

>100_bases
AACAAGCCGCCTTCTGCACTGCCAGGCACAGGTCGCAAGACTGGTGCAGGCGGTCTACGCTTGCATGCGCAACGCTGGTA
TCCGCAGCAGCTGCCTGACG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 453; Mature: 453

Protein sequence:

>453_residues
MLAKFLKAALLGVCILIAAALALYAISRYWPIPESQRQALAQLRQPLPPLRGSNMFGALWSLSYAIPEAQREAVLAQDVE
RFNRLPEHAAFQSAAAGYRRLPGWPSGAPALCMASAGGCLQRVRERPQAYAAALAAQAPMLARMRALAQHADYRSPFRAR
VDTPLPELPRMSLSMTTSALEFVQGRTTQALSGVCTDAQVARVLMRSSDNLAITMIGAAMLRGNAHLFADMLAELPAQHP
LPAQCAAAFAPLPVDEIALCHALHGESRMVFSMLQEDALTRGSQSSWQDRFPLRLLDDERTQALLAPTFTWACSAPVRTL
LAQDQPVPQTLIPLPQTASVACIANATGCLLASVSRPDYANYQRKMQDAAAALRALSALQWLRDHPAQTMPLTQRIAALP
PALRGQVRPLGAGNDGKSLTLRQYARPEGGAGNDRWPVPGSAIAATQAASSAR

Sequences:

>Translated_453_residues
MLAKFLKAALLGVCILIAAALALYAISRYWPIPESQRQALAQLRQPLPPLRGSNMFGALWSLSYAIPEAQREAVLAQDVE
RFNRLPEHAAFQSAAAGYRRLPGWPSGAPALCMASAGGCLQRVRERPQAYAAALAAQAPMLARMRALAQHADYRSPFRAR
VDTPLPELPRMSLSMTTSALEFVQGRTTQALSGVCTDAQVARVLMRSSDNLAITMIGAAMLRGNAHLFADMLAELPAQHP
LPAQCAAAFAPLPVDEIALCHALHGESRMVFSMLQEDALTRGSQSSWQDRFPLRLLDDERTQALLAPTFTWACSAPVRTL
LAQDQPVPQTLIPLPQTASVACIANATGCLLASVSRPDYANYQRKMQDAAAALRALSALQWLRDHPAQTMPLTQRIAALP
PALRGQVRPLGAGNDGKSLTLRQYARPEGGAGNDRWPVPGSAIAATQAASSAR
>Mature_453_residues
MLAKFLKAALLGVCILIAAALALYAISRYWPIPESQRQALAQLRQPLPPLRGSNMFGALWSLSYAIPEAQREAVLAQDVE
RFNRLPEHAAFQSAAAGYRRLPGWPSGAPALCMASAGGCLQRVRERPQAYAAALAAQAPMLARMRALAQHADYRSPFRAR
VDTPLPELPRMSLSMTTSALEFVQGRTTQALSGVCTDAQVARVLMRSSDNLAITMIGAAMLRGNAHLFADMLAELPAQHP
LPAQCAAAFAPLPVDEIALCHALHGESRMVFSMLQEDALTRGSQSSWQDRFPLRLLDDERTQALLAPTFTWACSAPVRTL
LAQDQPVPQTLIPLPQTASVACIANATGCLLASVSRPDYANYQRKMQDAAAALRALSALQWLRDHPAQTMPLTQRIAALP
PALRGQVRPLGAGNDGKSLTLRQYARPEGGAGNDRWPVPGSAIAATQAASSAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48760; Mature: 48760

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAKFLKAALLGVCILIAAALALYAISRYWPIPESQRQALAQLRQPLPPLRGSNMFGALW
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHH
SLSYAIPEAQREAVLAQDVERFNRLPEHAAFQSAAAGYRRLPGWPSGAPALCMASAGGCL
HHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHH
QRVRERPQAYAAALAAQAPMLARMRALAQHADYRSPFRARVDTPLPELPRMSLSMTTSAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCHHHHHHHHH
EFVQGRTTQALSGVCTDAQVARVLMRSSDNLAITMIGAAMLRGNAHLFADMLAELPAQHP
HHHHCCHHHHHHHCCCHHHHHHHHHHCCCCEEEEEHHHHHHHCCHHHHHHHHHHCCCCCC
LPAQCAAAFAPLPVDEIALCHALHGESRMVFSMLQEDALTRGSQSSWQDRFPLRLLDDER
CCHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHCCCCCEEECCHH
TQALLAPTFTWACSAPVRTLLAQDQPVPQTLIPLPQTASVACIANATGCLLASVSRPDYA
HHHHHCCCHHHHCCHHHHHHHHCCCCCCHHHCCCCCCCCEEEECCCHHHHHEECCCCCHH
NYQRKMQDAAAALRALSALQWLRDHPAQTMPLTQRIAALPPALRGQVRPLGAGNDGKSLT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHCCCCCCCCCCCCCCCEE
LRQYARPEGGAGNDRWPVPGSAIAATQAASSAR
HHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MLAKFLKAALLGVCILIAAALALYAISRYWPIPESQRQALAQLRQPLPPLRGSNMFGALW
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHH
SLSYAIPEAQREAVLAQDVERFNRLPEHAAFQSAAAGYRRLPGWPSGAPALCMASAGGCL
HHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHH
QRVRERPQAYAAALAAQAPMLARMRALAQHADYRSPFRARVDTPLPELPRMSLSMTTSAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCHHHHHHHHH
EFVQGRTTQALSGVCTDAQVARVLMRSSDNLAITMIGAAMLRGNAHLFADMLAELPAQHP
HHHHCCHHHHHHHCCCHHHHHHHHHHCCCCEEEEEHHHHHHHCCHHHHHHHHHHCCCCCC
LPAQCAAAFAPLPVDEIALCHALHGESRMVFSMLQEDALTRGSQSSWQDRFPLRLLDDER
CCHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHCCCCCEEECCHH
TQALLAPTFTWACSAPVRTLLAQDQPVPQTLIPLPQTASVACIANATGCLLASVSRPDYA
HHHHHCCCHHHHCCHHHHHHHHCCCCCCHHHCCCCCCCCEEEECCCHHHHHEECCCCCHH
NYQRKMQDAAAALRALSALQWLRDHPAQTMPLTQRIAALPPALRGQVRPLGAGNDGKSLT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHCCCCCCCCCCCCCCCEE
LRQYARPEGGAGNDRWPVPGSAIAATQAASSAR
HHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA