| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is 21242021
Identifier: 21242021
GI number: 21242021
Start: 1449991
End: 1452315
Strand: Direct
Name: 21242021
Synonym: XAC1268
Alternate gene names: NA
Gene position: 1449991-1452315 (Clockwise)
Preceding gene: 21242020
Following gene: 21242022
Centisome position: 28.02
GC content: 67.14
Gene sequence:
>2325_bases ATGGAAATCTGGAACTGGGTAGAAAAGCTGCAGGACGATCTGGGCGAAGCCGGCCAGCCGCAAAATGCGCAGCTGCTGAC GCGGCTGACCGACCACATCTGCGATCTGCAGATCGACCGCGCCGAGGCCTTGTTGCCGGAGGCGCGTGCGCTGGGCAAGA CGTTGGCCAACCCGTGGCTGGAGGTGTTCGTCGGGCATTGGGAAATGCGTAACCGGGTCGGCAATCTGTGCGAAGGCGAG CGTGCGCTGGGCGATGCGGTGGCGCTGTTCGAGCGTGCGCATCGCGCCGACGCAGTGGAGTGCCCGCAATCGGTCTGCGT GACCCAGGATCTGGCCGCGTGTTACGCCAACATCGATGGCCCGGGCTGGGTGGAAGAACGCATCGAGGTGTGCGACGAAA CCCTGGGGCGCATCGACCCGAGCTGGTCGTGTTACCAGTGCCTGAGCTGCGAAAAAGCCGACGCATTGCTCGACGACGGG CGCGGTGACGCGGCGCTGCAGTATCTGGAGCAGCAGTCGCAGACCATCCTGGCCCATGGCGGTGAAATCTACGACGGCGT GCCGGACATGCGCATCTCGATCCTGCTTGCGCTTGGGCGTGCGCAGGACGCGCTGGCGCTGGTGGAACAGCGCGAACGCG ACGCCGCGCGCGAAGGCGCCGAGTGGGCCAATTGCAGCCAGCCGCGCCGCCTGCAGAAAGCGCGCGCGTTGGCCCTGTTG CAGCGCGATGACGAGGCCATGGAAGCGCTGCTGCCATGGCGCGAGATTGCGCCGCGTTATCGCCTGCACTGGCTGCGTGC GGTGGCGGTGCTGGTGGCGCGCGCGCCCGAGCGCAATAGCTGGGACCTGGGCAGCCGCGTGCAGCAGATGCTCGACCATT ACGCGCAGGTTGGCGCGCATCGCATCCTGATCGAGGCAGCCGAGCTTGCGATCGGGCTGGCACTGCAACGCGGCGCGGTG TGGACCGCGCGCCGGCATCTGGCGCTTGCGCGTGCGCATCTTCCCAAGCTGCGTCACGACCGCGGCGCAACGCAGTTGCT GGATGGTCTGGCCGCGCGCATCGATGCAGCGCCTGCGGGTGAGGCCGCGCCGGCGCCGGCCGCACACCTGCTGGAATGGT TGAACGCGCAAGGCGACGATGTCGTGCGCAATCCCGAGCGCGAAGCGCAGTGGCTGCTGCAGGCCGTTGCGCAGTGTCCG GACGATGCCGAGCTTGTCGACACCGCCGCATCGGCCTTGAGCGCCTGCGCGGCCGACGAAGAAGCCATCGCACTGTTGTG GTCATTCGTGCAGCGGCATGCCGATCGCGAAACCAGCCCCACGTTCCGTCTGATGAATCTGTTGCTCGGCCGCGGCGACG AAGCAGGTCTGCGCCGGTTGACGCAGCTGTATCGCCCACAGGCGCCGGTGGCGGCGTTGTGGTGCGAGGCGCAGCTGGCG CAGCGGCTGGCCGATTGGCCGGCGCTGGAGCAGGCCTGCACCGCACTGCTGGAACTGTCACCCGGCTCGCATGGTGCGCG TGGGCTGCTGGCGCGCATGTATCTCAACGCCGGCCGGTTTGCCGAGGCCGCCGCGGTCTATCGGCAACTCACCGAGCTGC TGGAAGAGCCGCGCTCTGCGCATTGGGACCACATGACGGCGGCCAGCGCGGCGCAGGATTGGGACGCGGTGCGTGCCTCT GCGCAGGCCATTGGCATGGAGCTGAGCAGCACCAGCGGCGTAGTCGAAGAGACCTGGGGCTGGGTGATCATTCGTTGCAT GGATGATGGCGAAGTGGCCGAGTACTACGCGCGCCGCACCGGCCCGGTGACTGCGCGTATCGTCGAAAACGCGCCTGCGC ATCGGCGCCAGCATGTCGGTGACTGGGTGGTGTTCGATGCCGAATTGCTGTATTCGCCGCCGGAAGACGAAGCCGAACGC GAGCGTTTCGTGCCGACCTACGCGCAGGTGCATGTGCTGCAAGCCGGTGGCTATGCCAATAGCTGGCTGGTGGACGGCGT GCATCCTGGCGACGAGGTCATCGAGGCGATGCGTGCAGACATGGAAATGCGCGGCTGGAAGATGTGGCTGCACAGTCGCG ACGACTACCGCGTGGTCGACCCGGACCATCCGGATGCGTTCGACCCGGAGGATGCAACATCCGGACTGCCGGGCGTGTTG TTCACCGTGGCGCTTCCGGAAAACCTCGCCCCGCAGGAACTGCATCGCGTCCTGCGATGCACGACCTCGCGCTGGTCGCA TCCGATGTGCTGGCTGCGGCTTGCCGAGGCCTGCGGCCAGGATCCGCAGCCGCATCTGGATGCGGTGGAGCGTTACGGGT TGTAG
Upstream 100 bases:
>100_bases CGAATCGGGCGTTTCCGATCTCAACAAGGCCTTCGGCGATTTCGCTGGGACCGTGACCCAATTGCTGGCGCGCTGAGCGC CGCATCGCAGGAGCGACACG
Downstream 100 bases:
>100_bases GGCGGCGATTCGCGTTATCCGGCGGCGGCCGGTCATGCGATCGCCGCCGGGATTGGGCATTCGGGGTGTGTGGCGTGCGT TCTGGCGTCACTTTTGATGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 774; Mature: 774
Protein sequence:
>774_residues MEIWNWVEKLQDDLGEAGQPQNAQLLTRLTDHICDLQIDRAEALLPEARALGKTLANPWLEVFVGHWEMRNRVGNLCEGE RALGDAVALFERAHRADAVECPQSVCVTQDLAACYANIDGPGWVEERIEVCDETLGRIDPSWSCYQCLSCEKADALLDDG RGDAALQYLEQQSQTILAHGGEIYDGVPDMRISILLALGRAQDALALVEQRERDAAREGAEWANCSQPRRLQKARALALL QRDDEAMEALLPWREIAPRYRLHWLRAVAVLVARAPERNSWDLGSRVQQMLDHYAQVGAHRILIEAAELAIGLALQRGAV WTARRHLALARAHLPKLRHDRGATQLLDGLAARIDAAPAGEAAPAPAAHLLEWLNAQGDDVVRNPEREAQWLLQAVAQCP DDAELVDTAASALSACAADEEAIALLWSFVQRHADRETSPTFRLMNLLLGRGDEAGLRRLTQLYRPQAPVAALWCEAQLA QRLADWPALEQACTALLELSPGSHGARGLLARMYLNAGRFAEAAAVYRQLTELLEEPRSAHWDHMTAASAAQDWDAVRAS AQAIGMELSSTSGVVEETWGWVIIRCMDDGEVAEYYARRTGPVTARIVENAPAHRRQHVGDWVVFDAELLYSPPEDEAER ERFVPTYAQVHVLQAGGYANSWLVDGVHPGDEVIEAMRADMEMRGWKMWLHSRDDYRVVDPDHPDAFDPEDATSGLPGVL FTVALPENLAPQELHRVLRCTTSRWSHPMCWLRLAEACGQDPQPHLDAVERYGL
Sequences:
>Translated_774_residues MEIWNWVEKLQDDLGEAGQPQNAQLLTRLTDHICDLQIDRAEALLPEARALGKTLANPWLEVFVGHWEMRNRVGNLCEGE RALGDAVALFERAHRADAVECPQSVCVTQDLAACYANIDGPGWVEERIEVCDETLGRIDPSWSCYQCLSCEKADALLDDG RGDAALQYLEQQSQTILAHGGEIYDGVPDMRISILLALGRAQDALALVEQRERDAAREGAEWANCSQPRRLQKARALALL QRDDEAMEALLPWREIAPRYRLHWLRAVAVLVARAPERNSWDLGSRVQQMLDHYAQVGAHRILIEAAELAIGLALQRGAV WTARRHLALARAHLPKLRHDRGATQLLDGLAARIDAAPAGEAAPAPAAHLLEWLNAQGDDVVRNPEREAQWLLQAVAQCP DDAELVDTAASALSACAADEEAIALLWSFVQRHADRETSPTFRLMNLLLGRGDEAGLRRLTQLYRPQAPVAALWCEAQLA QRLADWPALEQACTALLELSPGSHGARGLLARMYLNAGRFAEAAAVYRQLTELLEEPRSAHWDHMTAASAAQDWDAVRAS AQAIGMELSSTSGVVEETWGWVIIRCMDDGEVAEYYARRTGPVTARIVENAPAHRRQHVGDWVVFDAELLYSPPEDEAER ERFVPTYAQVHVLQAGGYANSWLVDGVHPGDEVIEAMRADMEMRGWKMWLHSRDDYRVVDPDHPDAFDPEDATSGLPGVL FTVALPENLAPQELHRVLRCTTSRWSHPMCWLRLAEACGQDPQPHLDAVERYGL >Mature_774_residues MEIWNWVEKLQDDLGEAGQPQNAQLLTRLTDHICDLQIDRAEALLPEARALGKTLANPWLEVFVGHWEMRNRVGNLCEGE RALGDAVALFERAHRADAVECPQSVCVTQDLAACYANIDGPGWVEERIEVCDETLGRIDPSWSCYQCLSCEKADALLDDG RGDAALQYLEQQSQTILAHGGEIYDGVPDMRISILLALGRAQDALALVEQRERDAAREGAEWANCSQPRRLQKARALALL QRDDEAMEALLPWREIAPRYRLHWLRAVAVLVARAPERNSWDLGSRVQQMLDHYAQVGAHRILIEAAELAIGLALQRGAV WTARRHLALARAHLPKLRHDRGATQLLDGLAARIDAAPAGEAAPAPAAHLLEWLNAQGDDVVRNPEREAQWLLQAVAQCP DDAELVDTAASALSACAADEEAIALLWSFVQRHADRETSPTFRLMNLLLGRGDEAGLRRLTQLYRPQAPVAALWCEAQLA QRLADWPALEQACTALLELSPGSHGARGLLARMYLNAGRFAEAAAVYRQLTELLEEPRSAHWDHMTAASAAQDWDAVRAS AQAIGMELSSTSGVVEETWGWVIIRCMDDGEVAEYYARRTGPVTARIVENAPAHRRQHVGDWVVFDAELLYSPPEDEAER ERFVPTYAQVHVLQAGGYANSWLVDGVHPGDEVIEAMRADMEMRGWKMWLHSRDDYRVVDPDHPDAFDPEDATSGLPGVL FTVALPENLAPQELHRVLRCTTSRWSHPMCWLRLAEACGQDPQPHLDAVERYGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 86082; Mature: 86082
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIWNWVEKLQDDLGEAGQPQNAQLLTRLTDHICDLQIDRAEALLPEARALGKTLANPWL CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH EVFVGHWEMRNRVGNLCEGERALGDAVALFERAHRADAVECPQSVCVTQDLAACYANIDG HHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHCCCC PGWVEERIEVCDETLGRIDPSWSCYQCLSCEKADALLDDGRGDAALQYLEQQSQTILAHG CCHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC GEIYDGVPDMRISILLALGRAQDALALVEQRERDAAREGAEWANCSQPRRLQKARALALL CHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH QRDDEAMEALLPWREIAPRYRLHWLRAVAVLVARAPERNSWDLGSRVQQMLDHYAQVGAH HCCHHHHHHHCCHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH RILIEAAELAIGLALQRGAVWTARRHLALARAHLPKLRHDRGATQLLDGLAARIDAAPAG HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC EAAPAPAAHLLEWLNAQGDDVVRNPEREAQWLLQAVAQCPDDAELVDTAASALSACAADE CCCCCCHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCH EAIALLWSFVQRHADRETSPTFRLMNLLLGRGDEAGLRRLTQLYRPQAPVAALWCEAQLA HHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH QRLADWPALEQACTALLELSPGSHGARGLLARMYLNAGRFAEAAAVYRQLTELLEEPRSA HHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHC HWDHMTAASAAQDWDAVRASAQAIGMELSSTSGVVEETWGWVIIRCMDDGEVAEYYARRT CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCEEEEEECCCCHHHHHHHHHC GPVTARIVENAPAHRRQHVGDWVVFDAELLYSPPEDEAERERFVPTYAQVHVLQAGGYAN CCEEEHHHHCCCHHHHHCCCCEEEEEHHHHCCCCCCHHHHHHCCCCHHHEEEEECCCCCC SWLVDGVHPGDEVIEAMRADMEMRGWKMWLHSRDDYRVVDPDHPDAFDPEDATSGLPGVL CCEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCEE FTVALPENLAPQELHRVLRCTTSRWSHPMCWLRLAEACGQDPQPHLDAVERYGL EEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCC >Mature Secondary Structure MEIWNWVEKLQDDLGEAGQPQNAQLLTRLTDHICDLQIDRAEALLPEARALGKTLANPWL CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH EVFVGHWEMRNRVGNLCEGERALGDAVALFERAHRADAVECPQSVCVTQDLAACYANIDG HHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHCCCC PGWVEERIEVCDETLGRIDPSWSCYQCLSCEKADALLDDGRGDAALQYLEQQSQTILAHG CCHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC GEIYDGVPDMRISILLALGRAQDALALVEQRERDAAREGAEWANCSQPRRLQKARALALL CHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH QRDDEAMEALLPWREIAPRYRLHWLRAVAVLVARAPERNSWDLGSRVQQMLDHYAQVGAH HCCHHHHHHHCCHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH RILIEAAELAIGLALQRGAVWTARRHLALARAHLPKLRHDRGATQLLDGLAARIDAAPAG HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC EAAPAPAAHLLEWLNAQGDDVVRNPEREAQWLLQAVAQCPDDAELVDTAASALSACAADE CCCCCCHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCH EAIALLWSFVQRHADRETSPTFRLMNLLLGRGDEAGLRRLTQLYRPQAPVAALWCEAQLA HHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH QRLADWPALEQACTALLELSPGSHGARGLLARMYLNAGRFAEAAAVYRQLTELLEEPRSA HHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHC HWDHMTAASAAQDWDAVRASAQAIGMELSSTSGVVEETWGWVIIRCMDDGEVAEYYARRT CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCEEEEEECCCCHHHHHHHHHC GPVTARIVENAPAHRRQHVGDWVVFDAELLYSPPEDEAERERFVPTYAQVHVLQAGGYAN CCEEEHHHHCCCHHHHHCCCCEEEEEHHHHCCCCCCHHHHHHCCCCHHHEEEEECCCCCC SWLVDGVHPGDEVIEAMRADMEMRGWKMWLHSRDDYRVVDPDHPDAFDPEDATSGLPGVL CCEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCEE FTVALPENLAPQELHRVLRCTTSRWSHPMCWLRLAEACGQDPQPHLDAVERYGL EEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA