| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241812
Identifier: 21241812
GI number: 21241812
Start: 1208132
End: 1208893
Strand: Reverse
Name: 21241812
Synonym: XAC1047
Alternate gene names: NA
Gene position: 1208893-1208132 (Counterclockwise)
Preceding gene: 21241814
Following gene: 21241808
Centisome position: 23.36
GC content: 63.25
Gene sequence:
>762_bases ATGCGTAGCGGTAACCCTGCCCTTCGGGAATCCACATTCCTCGACTCCGGCTCCGGCTCGGTCGTCACCCGCGACGGCCA GGCGATGACCCTCAACGGCACGGTCAACAAGACCGGCGCGTTGTTGCTGATGGCGGTGATCACGGCCGCCTTCGCCTGGT CGCAATCGATCGGCGCCGATGGCATGCCGCTGCCCGTCGCGCGTATCTACATGATCGCCGGCGCGATCGGCGGCCTGGTG TTCGCACTGGCCACCAGCCTCAAGCCGACCTGGGCACCGATTACGGCGCCGCTGTACGCACTGATCGAAGGCTTCTTCCT CGGCTCGATCTCGGCGGTGTACGAAGCACGCTTCAACGGCATCGTGTTCCAGGCCGTCCTGCTCACTTTCGGCACCCTGT TCGCGCTGCTGTTCGCGTACCGCAGCGGCATGATCAAGGCCACCGAGAACTTCAAGCTGGGTGTGGTCGCAGCCACTGGC GGCATCGCGCTGGTATATCTGGCGACCATCGTGCTCGGCTTGTTCGGTGTGCGCATCCCTTTCATCCACGACTCGGGCCT GATCGGCATTGGTTTTAGCCTGTTCGTGGTGGTGGTGGCGGCATTGAACCTGGTGCTGGACTTCGACTTCATCGAGAGCG GCGTCGAGCACGGAGCGCCCAAGCACATGGAGTGGTACGGCGCATTCGGCCTGATGGTGACGCTGGTGTGGCTGTACATC GAGTTCCTGCGCCTGCTGTCGAAGCTGCAGTCGCGCAATTGA
Upstream 100 bases:
>100_bases TTTGGCCTCGCTGTCAATCACCCTGTGCAACTTGACCGATCAGCTATCCTCGCAACAACGTTCGCCAGTAGGGTGAGCAC TATTTTCATGGAGAACACGC
Downstream 100 bases:
>100_bases GTGGGGAATTGGGAATCGTCAGAGCGATTTCCTGCAATCGATAAGCAGATACGGCTTCTCAGCGACTTCCGAGCAAAACA AAAGGCGCCTAGGCGCCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Permease Of Facilitator Superfamily Protein; Membrane Spanning Protein
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MRSGNPALRESTFLDSGSGSVVTRDGQAMTLNGTVNKTGALLLMAVITAAFAWSQSIGADGMPLPVARIYMIAGAIGGLV FALATSLKPTWAPITAPLYALIEGFFLGSISAVYEARFNGIVFQAVLLTFGTLFALLFAYRSGMIKATENFKLGVVAATG GIALVYLATIVLGLFGVRIPFIHDSGLIGIGFSLFVVVVAALNLVLDFDFIESGVEHGAPKHMEWYGAFGLMVTLVWLYI EFLRLLSKLQSRN
Sequences:
>Translated_253_residues MRSGNPALRESTFLDSGSGSVVTRDGQAMTLNGTVNKTGALLLMAVITAAFAWSQSIGADGMPLPVARIYMIAGAIGGLV FALATSLKPTWAPITAPLYALIEGFFLGSISAVYEARFNGIVFQAVLLTFGTLFALLFAYRSGMIKATENFKLGVVAATG GIALVYLATIVLGLFGVRIPFIHDSGLIGIGFSLFVVVVAALNLVLDFDFIESGVEHGAPKHMEWYGAFGLMVTLVWLYI EFLRLLSKLQSRN >Mature_253_residues MRSGNPALRESTFLDSGSGSVVTRDGQAMTLNGTVNKTGALLLMAVITAAFAWSQSIGADGMPLPVARIYMIAGAIGGLV FALATSLKPTWAPITAPLYALIEGFFLGSISAVYEARFNGIVFQAVLLTFGTLFALLFAYRSGMIKATENFKLGVVAATG GIALVYLATIVLGLFGVRIPFIHDSGLIGIGFSLFVVVVAALNLVLDFDFIESGVEHGAPKHMEWYGAFGLMVTLVWLYI EFLRLLSKLQSRN
Specific function: Unknown
COG id: COG4760
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26967; Mature: 26967
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: PS00778 HIS_ACID_PHOSPHAT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSGNPALRESTFLDSGSGSVVTRDGQAMTLNGTVNKTGALLLMAVITAAFAWSQSIGAD CCCCCCCHHHHHCCCCCCCCEEEECCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCC GMPLPVARIYMIAGAIGGLVFALATSLKPTWAPITAPLYALIEGFFLGSISAVYEARFNG CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCH IVFQAVLLTFGTLFALLFAYRSGMIKATENFKLGVVAATGGIALVYLATIVLGLFGVRIP HHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCC FIHDSGLIGIGFSLFVVVVAALNLVLDFDFIESGVEHGAPKHMEWYGAFGLMVTLVWLYI EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH EFLRLLSKLQSRN HHHHHHHHHHCCC >Mature Secondary Structure MRSGNPALRESTFLDSGSGSVVTRDGQAMTLNGTVNKTGALLLMAVITAAFAWSQSIGAD CCCCCCCHHHHHCCCCCCCCEEEECCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCC GMPLPVARIYMIAGAIGGLVFALATSLKPTWAPITAPLYALIEGFFLGSISAVYEARFNG CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCH IVFQAVLLTFGTLFALLFAYRSGMIKATENFKLGVVAATGGIALVYLATIVLGLFGVRIP HHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCC FIHDSGLIGIGFSLFVVVVAALNLVLDFDFIESGVEHGAPKHMEWYGAFGLMVTLVWLYI EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH EFLRLLSKLQSRN HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA