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The map label for this gene is yfgC [C]

Identifier: 21241808

GI number: 21241808

Start: 1204277

End: 1205923

Strand: Reverse

Name: yfgC [C]

Synonym: XAC1043

Alternate gene names: 21241808

Gene position: 1205923-1204277 (Counterclockwise)

Preceding gene: 21241812

Following gene: 21241807

Centisome position: 23.3

GC content: 67.52

Gene sequence:

>1647_bases
TTGCGCCTGCTACCGCTCGCCACTGCGCTCACGCTGGCCGTTGCCATCGGTGTGGCACCTGCGCAGGAAAGCCGCCTTCC
CGACATCGGTTCGTCGGCCGGCGAGTTGCTGACCCCCGCTCGCCAGGCCGAATACGGCCGGATGATGCTGGCCGAGCTGC
GCAACTACGACTACGTGCTGGACGACCCGCTGATTACCGATTGGCTGCAGACCATGGGCACCCGGCTGGGCGCCAACAGC
GACCAACCGCAGCAACCGTTTACTTTCTTCATGCTGCGCGACCGCCAGATCAATGCATTCGCCACGTTGGGCGGCTACAT
CGCCGTCAATGCCGGGCTGGTGTTGACCGCTGAGCGCGAGGACGAAGTGGCGGCGGTGCTGTCGCACGAAATCGCCCACG
TCACCCAGCAGCACGTGCTGCGTGGAGTGGAGCGTGCGGAACGTGACCAGATTCCGATCCTGCTCGGCATGCTGGCGGCG
GTGGTGGCAGCGCAGCAGGCCGGCGGCAACTCCAAGGGCGACGCCACCATGGCCACCATCACCAGCGCGATGGGGCTGAT
GCAGCAGCGCCAGATCGACTACACCCGCTCCAACGAATCCGAAGCCGACCGGCTGGGCATCCGCACGTTGGCGCGCAGCG
GCTACGACGTGGATGCGATGGCCGGCTTCTTCGAGCGCATGTCGGTGGCGATGCGCGCCAACGAGGGTGGCTACAGCGCG
CCGGATTTCCTGCAGACCCACCCGGTGACCGTCACCCGCATCAGCGAAGCCAAGTCGCGCGCCGAACAGATGAAGAAGAA
CACCGTGGTGCTGACGACCTCGGTGCCGGGCGGGACGCGCCAGGAGCGCGTAGACCCGGCCGACCCGTCGCTGTCGGAGC
CGCTCAGCCGCAATGGCAACGCGCTGCTCCCTTACGCGCTGCGGTTGCCGGTGGATGCGCTCAGCCGCGGCGCCGACCAG
CAGGGCTTCGATTGGGCCAAGGAGCGCCTGCGCGTGCTCAGCGCAGCCACGCCGGATGCGGCCATTCGCGAGTACGAAAA
CCTGCGTCGCAGCTCCAAACAAGGCTTGAGCGATCCGCAGCGCTATGGCCTGGCGCTGGCGCGGCTGCGCAACAGCGGCG
GGCGGCCGGGCGAGCCGGTGGCCGAGCTGACCAGCCTGCTCGAGGCACATCCGGACAACTTATGGCTGGCGTTGGGCCTG
AGCGAGGCGCAGGCGCGCATAGGTCCGCGAGAAGCGGCCAATGCCCGCTTCGATGCGCTGCTCAAGCAATTGCCGAACAA
CCGCGCGGTCGCGCTGACCTATGCCACTGCGCTCAACGAGCAGGCCAGCAAGGAGTCCGGCCAGCGCGCGCGCCAGGTGC
TGGAGCCGTTGTTGCACCGGAGCAGCGACGACCCGCTGCTGCAACAGAGCTACGCCCGTGCTTGCGAGCTGTCCGGCGAC
CCATTGCGCGCCAGCGAGGCGTATGCGGAAGCGGCGTTCTTGAACGGTCGCGCCGAACAGGCGCTGATCCAGCTGGAAGC
ACTGAAAAAGAAAGATCTCGACTATGTGACACGGGCGCGCGTGGACGCGCGCATCGCCGCGATCACCCCAACCGTGCTGG
AGCTGCGTCGCCAGGGCATCCGCGACCCGGATTTGTCCACGCGCTGA

Upstream 100 bases:

>100_bases
GGAATTTCCACGTCGTCACCGCAACACTGTGGGTTAACCGACGATTCACGCCTCTGCGCCGGGCTGCCCGCATGCTCCGC
GCACCACCTGGGAGTTCCAC

Downstream 100 bases:

>100_bases
TCGCTGACGCATTGCCGGCTCTTCACGGCAGTAGGGGGTCGGACGGCCGCCTGCCGGTAACGAAACCGCGCAGTCCGCTT
CACGGGTCGTTGCCGCCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 548; Mature: 548

Protein sequence:

>548_residues
MRLLPLATALTLAVAIGVAPAQESRLPDIGSSAGELLTPARQAEYGRMMLAELRNYDYVLDDPLITDWLQTMGTRLGANS
DQPQQPFTFFMLRDRQINAFATLGGYIAVNAGLVLTAEREDEVAAVLSHEIAHVTQQHVLRGVERAERDQIPILLGMLAA
VVAAQQAGGNSKGDATMATITSAMGLMQQRQIDYTRSNESEADRLGIRTLARSGYDVDAMAGFFERMSVAMRANEGGYSA
PDFLQTHPVTVTRISEAKSRAEQMKKNTVVLTTSVPGGTRQERVDPADPSLSEPLSRNGNALLPYALRLPVDALSRGADQ
QGFDWAKERLRVLSAATPDAAIREYENLRRSSKQGLSDPQRYGLALARLRNSGGRPGEPVAELTSLLEAHPDNLWLALGL
SEAQARIGPREAANARFDALLKQLPNNRAVALTYATALNEQASKESGQRARQVLEPLLHRSSDDPLLQQSYARACELSGD
PLRASEAYAEAAFLNGRAEQALIQLEALKKKDLDYVTRARVDARIAAITPTVLELRRQGIRDPDLSTR

Sequences:

>Translated_548_residues
MRLLPLATALTLAVAIGVAPAQESRLPDIGSSAGELLTPARQAEYGRMMLAELRNYDYVLDDPLITDWLQTMGTRLGANS
DQPQQPFTFFMLRDRQINAFATLGGYIAVNAGLVLTAEREDEVAAVLSHEIAHVTQQHVLRGVERAERDQIPILLGMLAA
VVAAQQAGGNSKGDATMATITSAMGLMQQRQIDYTRSNESEADRLGIRTLARSGYDVDAMAGFFERMSVAMRANEGGYSA
PDFLQTHPVTVTRISEAKSRAEQMKKNTVVLTTSVPGGTRQERVDPADPSLSEPLSRNGNALLPYALRLPVDALSRGADQ
QGFDWAKERLRVLSAATPDAAIREYENLRRSSKQGLSDPQRYGLALARLRNSGGRPGEPVAELTSLLEAHPDNLWLALGL
SEAQARIGPREAANARFDALLKQLPNNRAVALTYATALNEQASKESGQRARQVLEPLLHRSSDDPLLQQSYARACELSGD
PLRASEAYAEAAFLNGRAEQALIQLEALKKKDLDYVTRARVDARIAAITPTVLELRRQGIRDPDLSTR
>Mature_548_residues
MRLLPLATALTLAVAIGVAPAQESRLPDIGSSAGELLTPARQAEYGRMMLAELRNYDYVLDDPLITDWLQTMGTRLGANS
DQPQQPFTFFMLRDRQINAFATLGGYIAVNAGLVLTAEREDEVAAVLSHEIAHVTQQHVLRGVERAERDQIPILLGMLAA
VVAAQQAGGNSKGDATMATITSAMGLMQQRQIDYTRSNESEADRLGIRTLARSGYDVDAMAGFFERMSVAMRANEGGYSA
PDFLQTHPVTVTRISEAKSRAEQMKKNTVVLTTSVPGGTRQERVDPADPSLSEPLSRNGNALLPYALRLPVDALSRGADQ
QGFDWAKERLRVLSAATPDAAIREYENLRRSSKQGLSDPQRYGLALARLRNSGGRPGEPVAELTSLLEAHPDNLWLALGL
SEAQARIGPREAANARFDALLKQLPNNRAVALTYATALNEQASKESGQRARQVLEPLLHRSSDDPLLQQSYARACELSGD
PLRASEAYAEAAFLNGRAEQALIQLEALKKKDLDYVTRARVDARIAAITPTVLELRRQGIRDPDLSTR

Specific function: Unknown

COG id: COG4783

COG function: function code R; Putative Zn-dependent protease, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=270, Percent_Identity=34.8148148148148, Blast_Score=170, Evalue=2e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 59784; Mature: 59784

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLPLATALTLAVAIGVAPAQESRLPDIGSSAGELLTPARQAEYGRMMLAELRNYDYVL
CCCCHHHHHHHHHHHHHCCCCHHCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHCCCCEEE
DDPLITDWLQTMGTRLGANSDQPQQPFTFFMLRDRQINAFATLGGYIAVNAGLVLTAERE
CCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCHHHHHCCEEEEECCEEEEECCC
DEVAAVLSHEIAHVTQQHVLRGVERAERDQIPILLGMLAAVVAAQQAGGNSKGDATMATI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
TSAMGLMQQRQIDYTRSNESEADRLGIRTLARSGYDVDAMAGFFERMSVAMRANEGGYSA
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCC
PDFLQTHPVTVTRISEAKSRAEQMKKNTVVLTTSVPGGTRQERVDPADPSLSEPLSRNGN
CCHHCCCCEEEEHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHCCCC
ALLPYALRLPVDALSRGADQQGFDWAKERLRVLSAATPDAAIREYENLRRSSKQGLSDPQ
EEECHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHH
RYGLALARLRNSGGRPGEPVAELTSLLEAHPDNLWLALGLSEAQARIGPREAANARFDAL
HHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEEEEECHHHHHHCCCHHHHHHHHHHH
LKQLPNNRAVALTYATALNEQASKESGQRARQVLEPLLHRSSDDPLLQQSYARACELSGD
HHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC
PLRASEAYAEAAFLNGRAEQALIQLEALKKKDLDYVTRARVDARIAAITPTVLELRRQGI
CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RDPDLSTR
CCCCCCCC
>Mature Secondary Structure
MRLLPLATALTLAVAIGVAPAQESRLPDIGSSAGELLTPARQAEYGRMMLAELRNYDYVL
CCCCHHHHHHHHHHHHHCCCCHHCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHCCCCEEE
DDPLITDWLQTMGTRLGANSDQPQQPFTFFMLRDRQINAFATLGGYIAVNAGLVLTAERE
CCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCHHHHHCCEEEEECCEEEEECCC
DEVAAVLSHEIAHVTQQHVLRGVERAERDQIPILLGMLAAVVAAQQAGGNSKGDATMATI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
TSAMGLMQQRQIDYTRSNESEADRLGIRTLARSGYDVDAMAGFFERMSVAMRANEGGYSA
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCC
PDFLQTHPVTVTRISEAKSRAEQMKKNTVVLTTSVPGGTRQERVDPADPSLSEPLSRNGN
CCHHCCCCEEEEHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHCCCC
ALLPYALRLPVDALSRGADQQGFDWAKERLRVLSAATPDAAIREYENLRRSSKQGLSDPQ
EEECHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHH
RYGLALARLRNSGGRPGEPVAELTSLLEAHPDNLWLALGLSEAQARIGPREAANARFDAL
HHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEEEEECHHHHHHCCCHHHHHHHHHHH
LKQLPNNRAVALTYATALNEQASKESGQRARQVLEPLLHRSSDDPLLQQSYARACELSGD
HHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC
PLRASEAYAEAAFLNGRAEQALIQLEALKKKDLDYVTRARVDARIAAITPTVLELRRQGI
CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RDPDLSTR
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]