| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is ppk [H]
Identifier: 21241805
GI number: 21241805
Start: 1199789
End: 1201891
Strand: Reverse
Name: ppk [H]
Synonym: XAC1040
Alternate gene names: 21241805
Gene position: 1201891-1199789 (Counterclockwise)
Preceding gene: 21241806
Following gene: 21241804
Centisome position: 23.22
GC content: 64.53
Gene sequence:
>2103_bases ATGGGCCACGCCAAAGAACTGCACGACATCACACCCGGCGACGACGTCGCCACCGATCCGTTGCGTGATCCGGCGCTGTA CATCAACCGCGAGCTGTCGCAGTTGGACTTCAATTTCCGGGTGCTGGCGCAGGCGCTCGACGAGCAGGTGCCATTGCTGG AACGGCTGCGCTTCCTGTGCATCTCGTGCACCAACCTGGACGAGTTCTTCGAGATCCGCGCGGCCACCGTGCGGCACGCA CAGGAGTTCGGGCTGCCGCCGGCACCGGACGGACTGAGCCCGACCGCCATCCTCAACGCGGTGCACGATCGCGCCGCCAA GTTGGTCGAGCAGCAATACCACGCGTGGAACGAGGTGCTGCGGCCGGCGATGGAAGACGCAGGCGTTGCGGTGCTCAGCC GCTCGGCATGGACGGCGCGCCAGAAACGTTGGCTGCGTGCGTATTTCCGCAACGAGATCATGCCGGTGCTGTCGCCGCTG GGCCTGGACCCGGCGCACCCGTTCCCGAAGATCCTCAACAAGACCTTGAACATCGTGGTGGTGCTCGAAGGCCAGGACGC GTTCGGTCGCGCCGGGCATCTGGCCATCGTGCGCGCGCCGCGTTCGCTGCCCCGCATCATCCAGCTGCCGGCAAGCCTGT CGCCGGAGGGCACGCAGAGCTTCGTGTTCCTGTCGTCGGTGTTGTCCGAATTCGTCGACGAGCTGTTCCCGGGCATGCAG GTGATGGGCTCGTACCAGTTCCGCGTCACCCGTAATTCCGAGCTGGTGGTGGACGAGGAAGAAGTCGAAAACCTGGCGCT GGCCCTGCGCGACGAATTGGTCACGCGCGGCTACCGGCCGGCGGTGCGGCTGGAGATCGCGCACGATTGCCCGGCACCGA TCCTGCGCACCTTGTTGCAGAATTTCGGCCTGAACGAGAACGCGGTGTATCGCATCACCGGGCCAGTCAATCTGAGCCGC GTCACGCAGGTCTATGACCTGGTGCAGCGCCCCGAACTCAAGTACCCATCGTTCAATCCGCGCACCTTGCGCGACAGCGA GGGCATCTTCGAGATCGTCAAAAAAGGCGATGTGTTGCTGCATCACCCCTTCGATGCGTTTACCGCGGTGCTGGATGTCA TCCGCCAGGCCGCAGTCGACCCGAACGTGCTGGCGATCAAGCAGACGCTGTATCGCACCGGCAAGGATTCGTTGATTGTC GATGCGCTGATTCTGGCCGCGCGCAACGGCAAGGACGTCACCGTGGTGGTGGAATTGCGTGCGCGCTTCGACGAAGAAGC CAACCTGGGCCTGGCCGACAAACTGCAGGAAGCCGGCGTGCAGGTGGTCTACGGCGTGGTCGGCTTCAAGACCCACGCCA AGATGCTGCTGATCGTGCGGCGCGAGGGCCGCAAGCTCAAACGCTACGTACACCTGGGCACCGGCAATTACCACAGCGGC ACCGCGCGCCTGTATACCGACATCAGCCTGATCACCGCCGATGCCGAGATCGGCAACGATGTGCACATGCTGTTCCAGCA GTTGTCCGGGCTTGCGCCGCGCATGAAGCTGGACCAGTTGCTGCAGTCGCCGTTTACGCTGCATGCGGGGGTGTTGAAGC GGATCGATCGGGAGACACGGTTGGCCCGCAAGGGTCGCCCGGGCCGCATCATCGCCAAGATGAACGCCCTCAACGAACCG CAGGTGGTGCGTGCGTTGTACACGGCGTCGCAGGCCGGGGTGCAGATCGATCTGATCGTGCGCGGGGCCTGCACGCTGCG TCCCGGGGTGCCAGGCGTGTCCGACAACATCCGCGTGCGTTCGATCGTGGGCCGCTTTCTGGAACATAGCCGCGTGTACT GGTTCGGCAACGACGGCGCTGCCGAGTTGTACTGCGCCAGTGCCGACTGGCTGGAACGCAATCTGCTGCGGCGGGTGGAG ACCTGCTTCCCGATCCTGGAACCGGACCTGGCCAAGCGCGTCTACCGCGAAGTGCTGCAGAACTATCTGGACGACAACGT CAGCGCCTGGGAGCTGGATGCCGAGGGCGTGTACCACAAGCGCACTCCCGCACCGGGCGAGCCGGCGCATTCGGCGCAGA TGACCTTGCTCGAGCGGATCTGA
Upstream 100 bases:
>100_bases GCGCGCCGCAGCGCGCTGCGATGGACGCGTCTGCCACGCGCCGCATTGCCTGCGTTGCGCGCACCAGGCAATTACACAAC CCGTCTTGACGATCGATTCC
Downstream 100 bases:
>100_bases GCGCTCACTGCAGCGACCAAGGTGGCAAGCCGCTTGCGCAGGCATGCGGCATGCCCATCACGGCGACCGGCCGCCCGCCC CCAGCGCTTCCAATACCGAG
Product: polyphosphate kinase
Products: NA
Alternate protein names: ATP-polyphosphate phosphotransferase; Polyphosphoric acid kinase [H]
Number of amino acids: Translated: 700; Mature: 699
Protein sequence:
>700_residues MGHAKELHDITPGDDVATDPLRDPALYINRELSQLDFNFRVLAQALDEQVPLLERLRFLCISCTNLDEFFEIRAATVRHA QEFGLPPAPDGLSPTAILNAVHDRAAKLVEQQYHAWNEVLRPAMEDAGVAVLSRSAWTARQKRWLRAYFRNEIMPVLSPL GLDPAHPFPKILNKTLNIVVVLEGQDAFGRAGHLAIVRAPRSLPRIIQLPASLSPEGTQSFVFLSSVLSEFVDELFPGMQ VMGSYQFRVTRNSELVVDEEEVENLALALRDELVTRGYRPAVRLEIAHDCPAPILRTLLQNFGLNENAVYRITGPVNLSR VTQVYDLVQRPELKYPSFNPRTLRDSEGIFEIVKKGDVLLHHPFDAFTAVLDVIRQAAVDPNVLAIKQTLYRTGKDSLIV DALILAARNGKDVTVVVELRARFDEEANLGLADKLQEAGVQVVYGVVGFKTHAKMLLIVRREGRKLKRYVHLGTGNYHSG TARLYTDISLITADAEIGNDVHMLFQQLSGLAPRMKLDQLLQSPFTLHAGVLKRIDRETRLARKGRPGRIIAKMNALNEP QVVRALYTASQAGVQIDLIVRGACTLRPGVPGVSDNIRVRSIVGRFLEHSRVYWFGNDGAAELYCASADWLERNLLRRVE TCFPILEPDLAKRVYREVLQNYLDDNVSAWELDAEGVYHKRTPAPGEPAHSAQMTLLERI
Sequences:
>Translated_700_residues MGHAKELHDITPGDDVATDPLRDPALYINRELSQLDFNFRVLAQALDEQVPLLERLRFLCISCTNLDEFFEIRAATVRHA QEFGLPPAPDGLSPTAILNAVHDRAAKLVEQQYHAWNEVLRPAMEDAGVAVLSRSAWTARQKRWLRAYFRNEIMPVLSPL GLDPAHPFPKILNKTLNIVVVLEGQDAFGRAGHLAIVRAPRSLPRIIQLPASLSPEGTQSFVFLSSVLSEFVDELFPGMQ VMGSYQFRVTRNSELVVDEEEVENLALALRDELVTRGYRPAVRLEIAHDCPAPILRTLLQNFGLNENAVYRITGPVNLSR VTQVYDLVQRPELKYPSFNPRTLRDSEGIFEIVKKGDVLLHHPFDAFTAVLDVIRQAAVDPNVLAIKQTLYRTGKDSLIV DALILAARNGKDVTVVVELRARFDEEANLGLADKLQEAGVQVVYGVVGFKTHAKMLLIVRREGRKLKRYVHLGTGNYHSG TARLYTDISLITADAEIGNDVHMLFQQLSGLAPRMKLDQLLQSPFTLHAGVLKRIDRETRLARKGRPGRIIAKMNALNEP QVVRALYTASQAGVQIDLIVRGACTLRPGVPGVSDNIRVRSIVGRFLEHSRVYWFGNDGAAELYCASADWLERNLLRRVE TCFPILEPDLAKRVYREVLQNYLDDNVSAWELDAEGVYHKRTPAPGEPAHSAQMTLLERI >Mature_699_residues GHAKELHDITPGDDVATDPLRDPALYINRELSQLDFNFRVLAQALDEQVPLLERLRFLCISCTNLDEFFEIRAATVRHAQ EFGLPPAPDGLSPTAILNAVHDRAAKLVEQQYHAWNEVLRPAMEDAGVAVLSRSAWTARQKRWLRAYFRNEIMPVLSPLG LDPAHPFPKILNKTLNIVVVLEGQDAFGRAGHLAIVRAPRSLPRIIQLPASLSPEGTQSFVFLSSVLSEFVDELFPGMQV MGSYQFRVTRNSELVVDEEEVENLALALRDELVTRGYRPAVRLEIAHDCPAPILRTLLQNFGLNENAVYRITGPVNLSRV TQVYDLVQRPELKYPSFNPRTLRDSEGIFEIVKKGDVLLHHPFDAFTAVLDVIRQAAVDPNVLAIKQTLYRTGKDSLIVD ALILAARNGKDVTVVVELRARFDEEANLGLADKLQEAGVQVVYGVVGFKTHAKMLLIVRREGRKLKRYVHLGTGNYHSGT ARLYTDISLITADAEIGNDVHMLFQQLSGLAPRMKLDQLLQSPFTLHAGVLKRIDRETRLARKGRPGRIIAKMNALNEPQ VVRALYTASQAGVQIDLIVRGACTLRPGVPGVSDNIRVRSIVGRFLEHSRVYWFGNDGAAELYCASADWLERNLLRRVET CFPILEPDLAKRVYREVLQNYLDDNVSAWELDAEGVYHKRTPAPGEPAHSAQMTLLERI
Specific function: Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) [H]
COG id: COG0855
COG function: function code P; Polyphosphate kinase
Gene ontology:
Cell location: Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the polyphosphate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1788847, Length=688, Percent_Identity=34.7383720930233, Blast_Score=387, Evalue=1e-108,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003414 [H]
Pfam domain/function: PF02503 PP_kinase [H]
EC number: =2.7.4.1 [H]
Molecular weight: Translated: 78463; Mature: 78332
Theoretical pI: Translated: 7.31; Mature: 7.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGHAKELHDITPGDDVATDPLRDPALYINRELSQLDFNFRVLAQALDEQVPLLERLRFLC CCCCCHHCCCCCCCCCCCCCCCCCHHHHCCHHHHHCCHHHHHHHHHHHCCCHHHHHHHHH ISCTNLDEFFEIRAATVRHAQEFGLPPAPDGLSPTAILNAVHDRAAKLVEQQYHAWNEVL HHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RPAMEDAGVAVLSRSAWTARQKRWLRAYFRNEIMPVLSPLGLDPAHPFPKILNKTLNIVV HHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCEEEEE VLEGQDAFGRAGHLAIVRAPRSLPRIIQLPASLSPEGTQSFVFLSSVLSEFVDELFPGMQ EEECCCCCCCCCCEEEEECCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHH VMGSYQFRVTRNSELVVDEEEVENLALALRDELVTRGYRPAVRLEIAHDCPAPILRTLLQ HHCCEEEEEECCCCEEECHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHH NFGLNENAVYRITGPVNLSRVTQVYDLVQRPELKYPSFNPRTLRDSEGIFEIVKKGDVLL HCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEE HHPFDAFTAVLDVIRQAAVDPNVLAIKQTLYRTGKDSLIVDALILAARNGKDVTVVVELR ECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEEEE ARFDEEANLGLADKLQEAGVQVVYGVVGFKTHAKMLLIVRREGRKLKRYVHLGTGNYHSG CCCCCCCCCCHHHHHHHCCCEEEHHHHHHHHCCEEEEEEECCCHHEEHEEEECCCCCCCC TARLYTDISLITADAEIGNDVHMLFQQLSGLAPRMKLDQLLQSPFTLHAGVLKRIDRETR CEEEEEEEEEEEECHHCCCHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH LARKGRPGRIIAKMNALNEPQVVRALYTASQAGVQIDLIVRGACTLRPGVPGVSDNIRVR HHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCEEEEEEEECCEEECCCCCCCCCCCHHH SIVGRFLEHSRVYWFGNDGAAELYCASADWLERNLLRRVETCFPILEPDLAKRVYREVLQ HHHHHHHHCCEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH NYLDDNVSAWELDAEGVYHKRTPAPGEPAHSAQMTLLERI HHHCCCCCEEEECCCCCEECCCCCCCCCCCHHHHHHHHCC >Mature Secondary Structure GHAKELHDITPGDDVATDPLRDPALYINRELSQLDFNFRVLAQALDEQVPLLERLRFLC CCCCHHCCCCCCCCCCCCCCCCCHHHHCCHHHHHCCHHHHHHHHHHHCCCHHHHHHHHH ISCTNLDEFFEIRAATVRHAQEFGLPPAPDGLSPTAILNAVHDRAAKLVEQQYHAWNEVL HHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RPAMEDAGVAVLSRSAWTARQKRWLRAYFRNEIMPVLSPLGLDPAHPFPKILNKTLNIVV HHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCEEEEE VLEGQDAFGRAGHLAIVRAPRSLPRIIQLPASLSPEGTQSFVFLSSVLSEFVDELFPGMQ EEECCCCCCCCCCEEEEECCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHH VMGSYQFRVTRNSELVVDEEEVENLALALRDELVTRGYRPAVRLEIAHDCPAPILRTLLQ HHCCEEEEEECCCCEEECHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHH NFGLNENAVYRITGPVNLSRVTQVYDLVQRPELKYPSFNPRTLRDSEGIFEIVKKGDVLL HCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEE HHPFDAFTAVLDVIRQAAVDPNVLAIKQTLYRTGKDSLIVDALILAARNGKDVTVVVELR ECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEEEE ARFDEEANLGLADKLQEAGVQVVYGVVGFKTHAKMLLIVRREGRKLKRYVHLGTGNYHSG CCCCCCCCCCHHHHHHHCCCEEEHHHHHHHHCCEEEEEEECCCHHEEHEEEECCCCCCCC TARLYTDISLITADAEIGNDVHMLFQQLSGLAPRMKLDQLLQSPFTLHAGVLKRIDRETR CEEEEEEEEEEEECHHCCCHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH LARKGRPGRIIAKMNALNEPQVVRALYTASQAGVQIDLIVRGACTLRPGVPGVSDNIRVR HHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCEEEEEEEECCEEECCCCCCCCCCCHHH SIVGRFLEHSRVYWFGNDGAAELYCASADWLERNLLRRVETCFPILEPDLAKRVYREVLQ HHHHHHHHCCEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH NYLDDNVSAWELDAEGVYHKRTPAPGEPAHSAQMTLLERI HHHCCCCCEEEECCCCCEECCCCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]