| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is phoR [H]
Identifier: 21241806
GI number: 21241806
Start: 1202004
End: 1203347
Strand: Reverse
Name: phoR [H]
Synonym: XAC1041
Alternate gene names: 21241806
Gene position: 1203347-1202004 (Counterclockwise)
Preceding gene: 21241807
Following gene: 21241805
Centisome position: 23.25
GC content: 67.56
Gene sequence:
>1344_bases GTGGTAACGCCTTCCATGCCTCAACACATCCGTTCCGCCTGGCTCAAGACGCTCGGCACCCTCGCGCTGTTGTTGGGCGC TGCCGTCGTCGCCGGCGTGCTGATCGGGCATGTGTGGATGGCGCTGACGCTCACCGCCCTGGGCGTGCTGGCCTGGCATT ACTGGCGGCTGCGCCAGGTGCTGCGGCGGCTGACCGCACGCCAGCGTGCCGAGCCGGCGGCCGGGATCGGCGCCTGGAAC GAACTGGACCGGCTGCTGTATCGCAGCCAGGCCGAAATGCGCGCGCGCAAGCGGCGCCTGATCGAAATGTTGCGCACCTA CCGCGCGGCGGCGCAGGCGCTACCGGATGCGGTGGTGGTCGTGGATCGCAACAGCCAGCGCGTGCAGTGGTTCAACAAGG CGGCCGGCGGTTTGCTCGGCCTGCACCATCCCGGCGACATGGGCGTGTCGATCGTGGAGCGGCTGCAGCCGTTGCCGCTG GCGCATTGGCTGGCGGCCGGGCGCAATGCAGAGCCGATGCTGGATGCCGCCTCGCCGGCAGACCCGGATCTGCGCCTGAA TCTGCGCCTGATTCCCTACTCCGACGACTACTGGCTGCTGGTGGCGCGCGATGTCAGCAAGCTGCTGCGGCTGGAACAGG TGCGCCGCGATTTCGTGGCCAACGTCTCGCATGAACTGCGCACCCCGCTGACGGTGGTGCACGGTTATCTGGACATGCTC GACCCGGAAGATTTCCCCGATTCGGGCCCGATGCTGGCGGAAATGCGCAAGCAATCCCAACGCATGGCGCAGCTGGTCGA AGACCTGTTGACGCTCTCGCGGCTGGAATCGCAGGAAGAACTCGGCGAAGAACACGTGGCGATGGCGCCGATGCTGTCGA CCTTGCGCCGCGAGGCCGAGGCGCACAGCCAGGGCCGCCATACCGTGGAGGTGATCGACGAGGCCGGCGTGGACCTGCTC GGCTCCAACAAGGAGCTGCACAGTGCGTTTTCCAATCTGGTGACCAATGCGGTGCGCTACACGCCCGGCGGCGGCACGGT GACGATCCGTTTCGTGCGCGAAGGCGATGGTGCGGCGCTGGCAGTGCGCGACACCGGCTATGGCATTCCCGCCTCGCACC TGCCGCGCATCACCGAACGCTTCTACCGCGTCTCCAGCAGCCGCTCGCGCGAGAGCGGCGGCACCGGGCTGGGGCTGTCG ATCGTCAAGCACATCCTGGGGCTGCATCAGGCGCGCCTGGACATCGAAAGCGAAGTGGGGCGCGGCAGCGAATTCTCGTG TCATTTCGTACCGGCGCGCGTCGTGCAGCGCGAGCAATCGGTGCCACTGTCACGCTCGGCGTGA
Upstream 100 bases:
>100_bases GACCGTACGTGGCTCCGGCTATCGTTTTTCTTCGGCGACCTGACGTGCCGCAAAGCCACCCGGCCACAGTCCGGCCGGGT GGCTGCCTACCTGACGCTTC
Downstream 100 bases:
>100_bases TATGTAGTCAGTGCGCGCCGCAGCGCGCTGCGATGGACGCGTCTGCCACGCGCCGCATTGCCTGCGTTGCGCGCACCAGG CAATTACACAACCCGTCTTG
Product: two-component system sensor protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 447; Mature: 447
Protein sequence:
>447_residues MVTPSMPQHIRSAWLKTLGTLALLLGAAVVAGVLIGHVWMALTLTALGVLAWHYWRLRQVLRRLTARQRAEPAAGIGAWN ELDRLLYRSQAEMRARKRRLIEMLRTYRAAAQALPDAVVVVDRNSQRVQWFNKAAGGLLGLHHPGDMGVSIVERLQPLPL AHWLAAGRNAEPMLDAASPADPDLRLNLRLIPYSDDYWLLVARDVSKLLRLEQVRRDFVANVSHELRTPLTVVHGYLDML DPEDFPDSGPMLAEMRKQSQRMAQLVEDLLTLSRLESQEELGEEHVAMAPMLSTLRREAEAHSQGRHTVEVIDEAGVDLL GSNKELHSAFSNLVTNAVRYTPGGGTVTIRFVREGDGAALAVRDTGYGIPASHLPRITERFYRVSSSRSRESGGTGLGLS IVKHILGLHQARLDIESEVGRGSEFSCHFVPARVVQREQSVPLSRSA
Sequences:
>Translated_447_residues MVTPSMPQHIRSAWLKTLGTLALLLGAAVVAGVLIGHVWMALTLTALGVLAWHYWRLRQVLRRLTARQRAEPAAGIGAWN ELDRLLYRSQAEMRARKRRLIEMLRTYRAAAQALPDAVVVVDRNSQRVQWFNKAAGGLLGLHHPGDMGVSIVERLQPLPL AHWLAAGRNAEPMLDAASPADPDLRLNLRLIPYSDDYWLLVARDVSKLLRLEQVRRDFVANVSHELRTPLTVVHGYLDML DPEDFPDSGPMLAEMRKQSQRMAQLVEDLLTLSRLESQEELGEEHVAMAPMLSTLRREAEAHSQGRHTVEVIDEAGVDLL GSNKELHSAFSNLVTNAVRYTPGGGTVTIRFVREGDGAALAVRDTGYGIPASHLPRITERFYRVSSSRSRESGGTGLGLS IVKHILGLHQARLDIESEVGRGSEFSCHFVPARVVQREQSVPLSRSA >Mature_447_residues MVTPSMPQHIRSAWLKTLGTLALLLGAAVVAGVLIGHVWMALTLTALGVLAWHYWRLRQVLRRLTARQRAEPAAGIGAWN ELDRLLYRSQAEMRARKRRLIEMLRTYRAAAQALPDAVVVVDRNSQRVQWFNKAAGGLLGLHHPGDMGVSIVERLQPLPL AHWLAAGRNAEPMLDAASPADPDLRLNLRLIPYSDDYWLLVARDVSKLLRLEQVRRDFVANVSHELRTPLTVVHGYLDML DPEDFPDSGPMLAEMRKQSQRMAQLVEDLLTLSRLESQEELGEEHVAMAPMLSTLRREAEAHSQGRHTVEVIDEAGVDLL GSNKELHSAFSNLVTNAVRYTPGGGTVTIRFVREGDGAALAVRDTGYGIPASHLPRITERFYRVSSSRSRESGGTGLGLS IVKHILGLHQARLDIESEVGRGSEFSCHFVPARVVQREQSVPLSRSA
Specific function: Member of the two-component regulatory system phoR/phoB involved in the phosphate regulon genes expression. PhoR may function as a membrane-associated protein kinase that phosphorylates phoB in response to environmental signals [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI1786600, Length=433, Percent_Identity=38.568129330254, Blast_Score=282, Evalue=3e-77, Organism=Escherichia coli, GI145693157, Length=226, Percent_Identity=31.4159292035398, Blast_Score=112, Evalue=3e-26, Organism=Escherichia coli, GI1788393, Length=262, Percent_Identity=30.1526717557252, Blast_Score=107, Evalue=1e-24, Organism=Escherichia coli, GI1786783, Length=269, Percent_Identity=29.368029739777, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1790346, Length=214, Percent_Identity=30.3738317757009, Blast_Score=93, Evalue=3e-20, Organism=Escherichia coli, GI1789149, Length=227, Percent_Identity=29.0748898678414, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1790551, Length=218, Percent_Identity=33.0275229357798, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI48994928, Length=267, Percent_Identity=27.7153558052434, Blast_Score=85, Evalue=1e-17, Organism=Escherichia coli, GI1790861, Length=205, Percent_Identity=30.2439024390244, Blast_Score=84, Evalue=3e-17, Organism=Escherichia coli, GI87082128, Length=219, Percent_Identity=26.9406392694064, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI1789403, Length=201, Percent_Identity=33.3333333333333, Blast_Score=79, Evalue=7e-16, Organism=Escherichia coli, GI87081816, Length=231, Percent_Identity=27.7056277056277, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1787894, Length=218, Percent_Identity=29.3577981651376, Blast_Score=72, Evalue=6e-14, Organism=Escherichia coli, GI1788549, Length=248, Percent_Identity=27.4193548387097, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1790436, Length=231, Percent_Identity=25.5411255411255, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1789808, Length=202, Percent_Identity=28.2178217821782, Blast_Score=62, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR021766 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR014310 [H]
Pfam domain/function: PF11808 DUF3329; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 49614; Mature: 49614
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTPSMPQHIRSAWLKTLGTLALLLGAAVVAGVLIGHVWMALTLTALGVLAWHYWRLRQV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRRLTARQRAEPAAGIGAWNELDRLLYRSQAEMRARKRRLIEMLRTYRAAAQALPDAVVV HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE VDRNSQRVQWFNKAAGGLLGLHHPGDMGVSIVERLQPLPLAHWLAAGRNAEPMLDAASPA ECCCCHHHHHHHHHCCCEEECCCCCCHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCC DPDLRLNLRLIPYSDDYWLLVARDVSKLLRLEQVRRDFVANVSHELRTPLTVVHGYLDML CCCEEEEEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHC DPEDFPDSGPMLAEMRKQSQRMAQLVEDLLTLSRLESQEELGEEHVAMAPMLSTLRREAE CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AHSQGRHTVEVIDEAGVDLLGSNKELHSAFSNLVTNAVRYTPGGGTVTIRFVREGDGAAL HHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCEEEEEEEEECCCCEE AVRDTGYGIPASHLPRITERFYRVSSSRSRESGGTGLGLSIVKHILGLHQARLDIESEVG EEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHCC RGSEFSCHFVPARVVQREQSVPLSRSA CCCCCEEEECHHHHHHHHHCCCCCCCC >Mature Secondary Structure MVTPSMPQHIRSAWLKTLGTLALLLGAAVVAGVLIGHVWMALTLTALGVLAWHYWRLRQV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRRLTARQRAEPAAGIGAWNELDRLLYRSQAEMRARKRRLIEMLRTYRAAAQALPDAVVV HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE VDRNSQRVQWFNKAAGGLLGLHHPGDMGVSIVERLQPLPLAHWLAAGRNAEPMLDAASPA ECCCCHHHHHHHHHCCCEEECCCCCCHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCC DPDLRLNLRLIPYSDDYWLLVARDVSKLLRLEQVRRDFVANVSHELRTPLTVVHGYLDML CCCEEEEEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHC DPEDFPDSGPMLAEMRKQSQRMAQLVEDLLTLSRLESQEELGEEHVAMAPMLSTLRREAE CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AHSQGRHTVEVIDEAGVDLLGSNKELHSAFSNLVTNAVRYTPGGGTVTIRFVREGDGAAL HHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCEEEEEEEEECCCCEE AVRDTGYGIPASHLPRITERFYRVSSSRSRESGGTGLGLSIVKHILGLHQARLDIESEVG EEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHCC RGSEFSCHFVPARVVQREQSVPLSRSA CCCCCEEEECHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2556368 [H]