| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241698
Identifier: 21241698
GI number: 21241698
Start: 1090032
End: 1091759
Strand: Direct
Name: 21241698
Synonym: XAC0928
Alternate gene names: NA
Gene position: 1090032-1091759 (Clockwise)
Preceding gene: 21241697
Following gene: 77748556
Centisome position: 21.06
GC content: 67.53
Gene sequence:
>1728_bases ATGTCCAACGCGTCGTTTCGTCCGCGCCACCGAGCGCTCTGCATCCTGGGTGTTTCGGCACTTACCTCGCTGCTGCTGGT AACGCCGGCATTCGCCGGCGATGTCTACCTGGGTGGCCTGGCCACTGCGCAGACCCACCAGAAGTTCATCGTGACCTACA AGGACGGCAGTAGCGCCCTGAGCAGCCCCAGTGTGTTGACGACCTCGTTGCGCACCGCTGCACGTGCGTTGCCGGCCAAG GCCGGCAAGTCGCTGGGCCTGAACAGCGTGCGTCGTCTGGCAGTGGGACCGGAGCTGGTTCAGGCCGACCGCGCGCTGGA TCGCGCCGAAGCCGAAACCCTGATGCGCCAGCTGGCCGCCGACCCCAACGTGCAAAGCGTGGAAGTGGACCAGATGCTGT ACCCCACGCTGACCCCCAACGACAGCCGCCTGTCCGAGCAGTGGGCCTTCGGCACCACCAACGCAGGGCTCAACATCCGC CCGGCCTGGGACAAGGCCACCGGTGCCAACGTCGTGGTTGCGGTGATCGACACCGGCATCGTCAGCCATCCCGACCTGGA CGCCAACATCCTGCCCGGCTACGACTTCATCAGCGATGCCACCGCCGCGCGCGACGGCAATGGGCGCGACAACAATCCTG CCGACGAAGGCGACTGGAACTCGACCAGCGGGTGCGCCACGTCCAATTCCAGCTGGCACGGGACCCATGTCGCCGGCACG GTGGCGGCGCTGACCAACAACACCACCGGCGTGGCCGGCACTGCGTTCAACGCCAAGGTGGTGCCGGTCCGCGTGCTGGG CCGGTGCGGTGGTTCGCTGTCGGACATTGCCGATGCCATCATTTGGGCCTCCGGCGGCACCGTGAGCGGTGTGCCGGCCA ATCCCAACGCGGCTGAAGTCATCAACATGTCGCTGGGCGGCGGTGGCACCTGTTCGTCCACGATGCAGAGCGCAATCAAC GGCGCAGTCTCGCGCGGTACCACGGTGGTGGTGGCGGCCGGCAACAGTGCCGCCAACGTGTCCGGTTCGTTGCCGGCCAA CTGCGCCAATGTGATCGCAGTGGCGGCCACGACCTCGGCCGGTGCCAAGGCCAGCTACTCCAACTACGGCAGCGGGATCG ACGTCTCCGCGCCAGGGTCGGGGATCCTGTCCACGCTCAACAGCGGGACCACCACGCCGGGCAACGCCAGCTACGCTTCG TACAACGGCACCTCGATGGCGGCGCCGCATGTGGCCGGCGTTGTTGCCCTCGTGCAGTCGGTTGCGCCCACCACGTTGAC GCCTGCCGCAGTGGAAACACTGCTGAAGAACACCGCACGCGCCTTGCCGGGTGCCTGTTCGGGCGGTTGCGGTGCGGGCA TCGTCGATGCCGATGCGGCAGTGACGGCGGCCATCGCCGGCAGCAGTGGCGGTGGCGGAACCGGCAACACCTTGACCAAC GGCACGCCGGTGACCGGCCTCGGCGCGGCCACGGGCGCGGAGTTGAACTACACCATCTCGGTGCCGGCCGGCAGCGGCAC GCTGACGGTCTCCACCAGCGGCGGCAGCGGCGATGCAGACCTGTACGTGCGGGCCGGTAGCGCGCCGACCGACACCGTCT ACGCCTGCCGCCCGTATCTGGATGGCAATGCCGAAACCTGCAACATCGCCTCGCCGTCGGGAACCTATTACGTGCGGATC AAGGCTTACAGCACGTTCTCCGGCGTGACCCTGACCGCCAGCTACTAA
Upstream 100 bases:
>100_bases GGATCGATAACAGGGGCGGTCCGGGGCACTGGGCCAGTCGCCATTGCGACGGTTTCGGAACTACCGCTTCGGCGGTTCTC TTGCACTGGAAGGGAATTCG
Downstream 100 bases:
>100_bases ACGCTGGATCGCTGCACGCGTTCCCTGGCATGACGTCAGGGAACGCTGCCACCATCGCTTCAACCCCATTTGCGATACCT CGCCCAGGTCTGCCGTTTCG
Product: extracellular protease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 575; Mature: 574
Protein sequence:
>575_residues MSNASFRPRHRALCILGVSALTSLLLVTPAFAGDVYLGGLATAQTHQKFIVTYKDGSSALSSPSVLTTSLRTAARALPAK AGKSLGLNSVRRLAVGPELVQADRALDRAEAETLMRQLAADPNVQSVEVDQMLYPTLTPNDSRLSEQWAFGTTNAGLNIR PAWDKATGANVVVAVIDTGIVSHPDLDANILPGYDFISDATAARDGNGRDNNPADEGDWNSTSGCATSNSSWHGTHVAGT VAALTNNTTGVAGTAFNAKVVPVRVLGRCGGSLSDIADAIIWASGGTVSGVPANPNAAEVINMSLGGGGTCSSTMQSAIN GAVSRGTTVVVAAGNSAANVSGSLPANCANVIAVAATTSAGAKASYSNYGSGIDVSAPGSGILSTLNSGTTTPGNASYAS YNGTSMAAPHVAGVVALVQSVAPTTLTPAAVETLLKNTARALPGACSGGCGAGIVDADAAVTAAIAGSSGGGGTGNTLTN GTPVTGLGAATGAELNYTISVPAGSGTLTVSTSGGSGDADLYVRAGSAPTDTVYACRPYLDGNAETCNIASPSGTYYVRI KAYSTFSGVTLTASY
Sequences:
>Translated_575_residues MSNASFRPRHRALCILGVSALTSLLLVTPAFAGDVYLGGLATAQTHQKFIVTYKDGSSALSSPSVLTTSLRTAARALPAK AGKSLGLNSVRRLAVGPELVQADRALDRAEAETLMRQLAADPNVQSVEVDQMLYPTLTPNDSRLSEQWAFGTTNAGLNIR PAWDKATGANVVVAVIDTGIVSHPDLDANILPGYDFISDATAARDGNGRDNNPADEGDWNSTSGCATSNSSWHGTHVAGT VAALTNNTTGVAGTAFNAKVVPVRVLGRCGGSLSDIADAIIWASGGTVSGVPANPNAAEVINMSLGGGGTCSSTMQSAIN GAVSRGTTVVVAAGNSAANVSGSLPANCANVIAVAATTSAGAKASYSNYGSGIDVSAPGSGILSTLNSGTTTPGNASYAS YNGTSMAAPHVAGVVALVQSVAPTTLTPAAVETLLKNTARALPGACSGGCGAGIVDADAAVTAAIAGSSGGGGTGNTLTN GTPVTGLGAATGAELNYTISVPAGSGTLTVSTSGGSGDADLYVRAGSAPTDTVYACRPYLDGNAETCNIASPSGTYYVRI KAYSTFSGVTLTASY >Mature_574_residues SNASFRPRHRALCILGVSALTSLLLVTPAFAGDVYLGGLATAQTHQKFIVTYKDGSSALSSPSVLTTSLRTAARALPAKA GKSLGLNSVRRLAVGPELVQADRALDRAEAETLMRQLAADPNVQSVEVDQMLYPTLTPNDSRLSEQWAFGTTNAGLNIRP AWDKATGANVVVAVIDTGIVSHPDLDANILPGYDFISDATAARDGNGRDNNPADEGDWNSTSGCATSNSSWHGTHVAGTV AALTNNTTGVAGTAFNAKVVPVRVLGRCGGSLSDIADAIIWASGGTVSGVPANPNAAEVINMSLGGGGTCSSTMQSAING AVSRGTTVVVAAGNSAANVSGSLPANCANVIAVAATTSAGAKASYSNYGSGIDVSAPGSGILSTLNSGTTTPGNASYASY NGTSMAAPHVAGVVALVQSVAPTTLTPAAVETLLKNTARALPGACSGGCGAGIVDADAAVTAAIAGSSGGGGTGNTLTNG TPVTGLGAATGAELNYTISVPAGSGTLTVSTSGGSGDADLYVRAGSAPTDTVYACRPYLDGNAETCNIASPSGTYYVRIK AYSTFSGVTLTASY
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
Organism=Homo sapiens, GI27894285, Length=407, Percent_Identity=28.7469287469287, Blast_Score=95, Evalue=2e-19, Organism=Homo sapiens, GI299523015, Length=324, Percent_Identity=30.2469135802469, Blast_Score=95, Evalue=2e-19, Organism=Homo sapiens, GI20336188, Length=407, Percent_Identity=28.7469287469287, Blast_Score=95, Evalue=2e-19, Organism=Homo sapiens, GI20336190, Length=407, Percent_Identity=28.7469287469287, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI20336180, Length=407, Percent_Identity=28.7469287469287, Blast_Score=94, Evalue=4e-19, Organism=Homo sapiens, GI4505577, Length=407, Percent_Identity=28.7469287469287, Blast_Score=94, Evalue=4e-19, Organism=Homo sapiens, GI20336184, Length=407, Percent_Identity=28.7469287469287, Blast_Score=93, Evalue=5e-19, Organism=Homo sapiens, GI20336182, Length=407, Percent_Identity=28.7469287469287, Blast_Score=93, Evalue=6e-19, Organism=Homo sapiens, GI20336246, Length=324, Percent_Identity=30.2469135802469, Blast_Score=92, Evalue=1e-18, Organism=Homo sapiens, GI20336186, Length=371, Percent_Identity=28.5714285714286, Blast_Score=92, Evalue=2e-18, Organism=Homo sapiens, GI4505579, Length=370, Percent_Identity=26.7567567567568, Blast_Score=84, Evalue=3e-16, Organism=Homo sapiens, GI76443679, Length=330, Percent_Identity=26.6666666666667, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI20336242, Length=342, Percent_Identity=26.0233918128655, Blast_Score=68, Evalue=3e-11, Organism=Homo sapiens, GI295424143, Length=342, Percent_Identity=26.0233918128655, Blast_Score=68, Evalue=3e-11, Organism=Caenorhabditis elegans, GI71983555, Length=364, Percent_Identity=28.2967032967033, Blast_Score=82, Evalue=8e-16, Organism=Caenorhabditis elegans, GI25141268, Length=364, Percent_Identity=28.2967032967033, Blast_Score=81, Evalue=1e-15, Organism=Caenorhabditis elegans, GI71988312, Length=364, Percent_Identity=26.9230769230769, Blast_Score=70, Evalue=3e-12, Organism=Caenorhabditis elegans, GI71988308, Length=326, Percent_Identity=28.2208588957055, Blast_Score=69, Evalue=5e-12, Organism=Caenorhabditis elegans, GI71988321, Length=369, Percent_Identity=27.10027100271, Blast_Score=69, Evalue=5e-12, Organism=Caenorhabditis elegans, GI71988315, Length=369, Percent_Identity=27.10027100271, Blast_Score=69, Evalue=6e-12, Organism=Caenorhabditis elegans, GI71988301, Length=369, Percent_Identity=27.10027100271, Blast_Score=69, Evalue=6e-12, Organism=Caenorhabditis elegans, GI71988297, Length=369, Percent_Identity=27.10027100271, Blast_Score=69, Evalue=9e-12, Organism=Saccharomyces cerevisiae, GI6320775, Length=345, Percent_Identity=31.304347826087, Blast_Score=107, Evalue=5e-24, Organism=Saccharomyces cerevisiae, GI6324576, Length=327, Percent_Identity=28.1345565749235, Blast_Score=100, Evalue=9e-22, Organism=Saccharomyces cerevisiae, GI6319893, Length=259, Percent_Identity=29.7297297297297, Blast_Score=75, Evalue=2e-14, Organism=Drosophila melanogaster, GI24642488, Length=349, Percent_Identity=28.6532951289398, Blast_Score=86, Evalue=6e-17, Organism=Drosophila melanogaster, GI24642484, Length=349, Percent_Identity=28.6532951289398, Blast_Score=86, Evalue=6e-17, Organism=Drosophila melanogaster, GI24642486, Length=349, Percent_Identity=28.6532951289398, Blast_Score=86, Evalue=6e-17, Organism=Drosophila melanogaster, GI281360987, Length=422, Percent_Identity=27.2511848341232, Blast_Score=84, Evalue=3e-16, Organism=Drosophila melanogaster, GI24642494, Length=346, Percent_Identity=29.1907514450867, Blast_Score=83, Evalue=6e-16, Organism=Drosophila melanogaster, GI24642490, Length=346, Percent_Identity=29.1907514450867, Blast_Score=83, Evalue=6e-16, Organism=Drosophila melanogaster, GI45555723, Length=346, Percent_Identity=29.1907514450867, Blast_Score=83, Evalue=6e-16, Organism=Drosophila melanogaster, GI24642492, Length=346, Percent_Identity=29.1907514450867, Blast_Score=83, Evalue=6e-16, Organism=Drosophila melanogaster, GI45553515, Length=359, Percent_Identity=27.2980501392758, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI24650056, Length=359, Percent_Identity=27.2980501392758, Blast_Score=71, Evalue=3e-12, Organism=Drosophila melanogaster, GI24650058, Length=359, Percent_Identity=27.2980501392758, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI24650060, Length=359, Percent_Identity=27.2980501392758, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI45553513, Length=359, Percent_Identity=27.2980501392758, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI17864552, Length=359, Percent_Identity=27.2980501392758, Blast_Score=70, Evalue=5e-12, Organism=Drosophila melanogaster, GI281360985, Length=155, Percent_Identity=36.7741935483871, Blast_Score=67, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007280 - InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 [H]
Pfam domain/function: PF00082 Peptidase_S8; PF04151 PPC [H]
EC number: NA
Molecular weight: Translated: 57067; Mature: 56935
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: PS00136 SUBTILASE_ASP ; PS00137 SUBTILASE_HIS ; PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNASFRPRHRALCILGVSALTSLLLVTPAFAGDVYLGGLATAQTHQKFIVTYKDGSSAL CCCCCCCCCHHEEEEEEHHHHHHHHHHCCCCCCCEEECCEEECCCCCEEEEEECCCCCCC SSPSVLTTSLRTAARALPAKAGKSLGLNSVRRLAVGPELVQADRALDRAEAETLMRQLAA CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHC DPNVQSVEVDQMLYPTLTPNDSRLSEQWAFGTTNAGLNIRPAWDKATGANVVVAVIDTGI CCCCCEEEHHHEECCCCCCCCCHHHHHHCCCCCCCCCEEEECCCCCCCCCEEEEEEECCC VSHPDLDANILPGYDFISDATAARDGNGRDNNPADEGDWNSTSGCATSNSSWHGTHVAGT CCCCCCCCCCCCCCHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEE VAALTNNTTGVAGTAFNAKVVPVRVLGRCGGSLSDIADAIIWASGGTVSGVPANPNAAEV EEEEECCCCCCEEECCCCEEEEEEEEECCCCCHHHHHHEEEEECCCEEECCCCCCCCEEE INMSLGGGGTCSSTMQSAINGAVSRGTTVVVAAGNSAANVSGSLPANCANVIAVAATTSA EEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCC GAKASYSNYGSGIDVSAPGSGILSTLNSGTTTPGNASYASYNGTSMAAPHVAGVVALVQS CCCCCCCCCCCCEEECCCCCHHHHHHCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHH VAPTTLTPAAVETLLKNTARALPGACSGGCGAGIVDADAAVTAAIAGSSGGGGTGNTLTN CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCCCCCC GTPVTGLGAATGAELNYTISVPAGSGTLTVSTSGGSGDADLYVRAGSAPTDTVYACRPYL CCCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCEEEEEECCCCCCCEEEEECCC DGNAETCNIASPSGTYYVRIKAYSTFSGVTLTASY CCCCCEEEECCCCCEEEEEEEEEECCCCEEEEECC >Mature Secondary Structure SNASFRPRHRALCILGVSALTSLLLVTPAFAGDVYLGGLATAQTHQKFIVTYKDGSSAL CCCCCCCCHHEEEEEEHHHHHHHHHHCCCCCCCEEECCEEECCCCCEEEEEECCCCCCC SSPSVLTTSLRTAARALPAKAGKSLGLNSVRRLAVGPELVQADRALDRAEAETLMRQLAA CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHC DPNVQSVEVDQMLYPTLTPNDSRLSEQWAFGTTNAGLNIRPAWDKATGANVVVAVIDTGI CCCCCEEEHHHEECCCCCCCCCHHHHHHCCCCCCCCCEEEECCCCCCCCCEEEEEEECCC VSHPDLDANILPGYDFISDATAARDGNGRDNNPADEGDWNSTSGCATSNSSWHGTHVAGT CCCCCCCCCCCCCCHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEE VAALTNNTTGVAGTAFNAKVVPVRVLGRCGGSLSDIADAIIWASGGTVSGVPANPNAAEV EEEEECCCCCCEEECCCCEEEEEEEEECCCCCHHHHHHEEEEECCCEEECCCCCCCCEEE INMSLGGGGTCSSTMQSAINGAVSRGTTVVVAAGNSAANVSGSLPANCANVIAVAATTSA EEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCC GAKASYSNYGSGIDVSAPGSGILSTLNSGTTTPGNASYASYNGTSMAAPHVAGVVALVQS CCCCCCCCCCCCEEECCCCCHHHHHHCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHH VAPTTLTPAAVETLLKNTARALPGACSGGCGAGIVDADAAVTAAIAGSSGGGGTGNTLTN CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCCCCCC GTPVTGLGAATGAELNYTISVPAGSGTLTVSTSGGSGDADLYVRAGSAPTDTVYACRPYL CCCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCEEEEEECCCCCCCEEEEECCC DGNAETCNIASPSGTYYVRIKAYSTFSGVTLTASY CCCCCEEEECCCCCEEEEEEEEEECCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2187155; 12024217 [H]