| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241386
Identifier: 21241386
GI number: 21241386
Start: 729469
End: 731118
Strand: Direct
Name: 21241386
Synonym: XAC0615
Alternate gene names: NA
Gene position: 729469-731118 (Clockwise)
Preceding gene: 77748542
Following gene: 77748543
Centisome position: 14.09
GC content: 65.21
Gene sequence:
>1650_bases ATGAAGCGAGTTGCCGTAGGACTTCTGGCGATGGCGGTCTCGACCGCACTGATGGCGGCCACGCCGAGTTTCGATGGCGC GCGCATCTCGCGTGACGTCAAGGAACTGGCCTCCGACGCCTATGAAGGCCGCGGCCCGGCCACCGCTGGCGAGGAAAAGA CCATTGCCTACTTGAGCAAACAGTTCGCCGAAGCCGGTCTGCAGCCGGGCGGCGATCTGGCCAACGGCAAGCGCGCCTGG ACCCAGGCGGTGCCGTTGCGGCGCGCCGATATCGTCGGCACGCCGACCATTGCCGTGCAGAGCGCCGGCCAGCCGCAAAC GCTGACCCAGGGCAAGCAAATCGCCATTCGTGCTGCGCTGGATGGCTCATCCACAGTGGAGATCGCCAACGCGCCGCTGG TGTTCGTCGGCTACGGCGTCAAGGCGCCCGAGCGCAACTGGGACGACTTCAAGGGTGTGGACCTGAAGGGCAAGATCGCG GTGGTGCTGATCAACGACCCGGACTTTGAAACCGGCAAGGGCGACTTCGACGGTGCCGGCATGACCTACTACGGCCGCTG GACGTACAAGTACGAAGAAGGCGCGCGCCAGGGCGCCCTGGGCGTGCTGGTGGTGCATGAAACCGCGCCGGCCTCGTACG GCTGGGACACGGTGGCCAGCTCCAACACCAACACCATGTTCGACGTGGTGCGCGACAACCCGCGCAGTGCGCATCCCACG CTGGAAGGCTGGATCCAGCGCGATCTGGCCACCGAACTGTTCAAGCACGCCGGGCTGGATTTCGAGACCTTGAAGAAGCA GGCGCAGACGCGCGGGTTCAAGCCGGTCGAGCTGAAGGGCCAGCGTTTGAGCGCCAGCTACCAGGTCAAATCCGATGTGA TCACCTCGCACAACGTGGTGGCGCGGCTGGAAGGCAGCAAACACCCGGACGAGACGGTGATCTACAGCGCGCACTGGGAT CATATCGGCGTGGGCAAGCCGGATGCACGCGGCGACACCATCTTCAATGGTGCATTGGACAATGCCAGCGGCACCGCCGC GCTGCTGGAGCTGGCGCGTGGTTTCGCCAAGGGGCCAACGCCTGAGCGCTCGGTGGTCTTCCTGGCGGTCACCGCCGAAG AAAAGGGTCTGCTGGGCTCGGAGTTCTACGCCTCCAAGCCGCTGTACCCGCTCGATACCACGGTGGCGGTGATCAACATG GACGGCATGAATCCGTTCGTGCCCTCGCGCGATTTCGGCATCTACGGCACGGCAAAGCTCGAACTGCTCGATCAACTGAA GAGCGTGGCCGCGCAATCCAAGCTGCGTTATACGCCCGATCCCAAGCCGCAGGCCGGGTATTTCTTCCGTTCCGATCACT TCTCGTTCGCCAAGCGCGGCGTGCCGGCGCTGTCGTATGCAGCCGGCCAGGATTGGGAAGTGGGCGGCGTGGCGGCAGGA AAGGCGGCCGCCGACGACTACACCGCCAAGCGCTATCACCAGCAAGGCGACGAATGGAAGCCGGATTGGACCTTCGCCGG CGCCGCCCGCGACTTGGGCGTGCTGTATGCACTGGGCCAGCAGCTGGCCGACTCGCGCCAGTGGCCGAACTGGAGCCAAG ATTCCCAGTTCCGCGCCACCCGCGACGCCAGCGCGGCGGCACGCAAGTAA
Upstream 100 bases:
>100_bases ACCCGCATCGCACGCATCGCACGCATCGGCGCAGCTGCAGGTATCGGCCTGCACGCGATGCTGGCTACACTCCAGGGCTA TCCATGATGCGGGGTGTGCA
Downstream 100 bases:
>100_bases GACCGGCGCACAACGCCGTTGCGCGAAACCGGGGCGGCTGCTCTTGCGCGATGCGGCATGTGCCATATCGACATGCCGCT TTTGAATCAGCCTCGCCTGC
Product: aminopeptidase
Products: NA
Alternate protein names: Aminopeptidase; Peptidase; M28 Family Peptidase; Peptidase Family M; Glutamate Carboxypeptidase II; M28 Family Aminopeptidase; Peptidase Family Protein; M23B Family Peptidase; Aminopeptidase Family; M20/M25/M40 Family Peptidase; Protein Containing Aminopeptidase Domain; Aminopeptidase Domain-Containing Protein; Component Of l Biopolymer Transport System; WD40-Like Beta Propeller; PDZ Domain-Containing Protein; Aminopeptidase Y
Number of amino acids: Translated: 549; Mature: 549
Protein sequence:
>549_residues MKRVAVGLLAMAVSTALMAATPSFDGARISRDVKELASDAYEGRGPATAGEEKTIAYLSKQFAEAGLQPGGDLANGKRAW TQAVPLRRADIVGTPTIAVQSAGQPQTLTQGKQIAIRAALDGSSTVEIANAPLVFVGYGVKAPERNWDDFKGVDLKGKIA VVLINDPDFETGKGDFDGAGMTYYGRWTYKYEEGARQGALGVLVVHETAPASYGWDTVASSNTNTMFDVVRDNPRSAHPT LEGWIQRDLATELFKHAGLDFETLKKQAQTRGFKPVELKGQRLSASYQVKSDVITSHNVVARLEGSKHPDETVIYSAHWD HIGVGKPDARGDTIFNGALDNASGTAALLELARGFAKGPTPERSVVFLAVTAEEKGLLGSEFYASKPLYPLDTTVAVINM DGMNPFVPSRDFGIYGTAKLELLDQLKSVAAQSKLRYTPDPKPQAGYFFRSDHFSFAKRGVPALSYAAGQDWEVGGVAAG KAAADDYTAKRYHQQGDEWKPDWTFAGAARDLGVLYALGQQLADSRQWPNWSQDSQFRATRDASAAARK
Sequences:
>Translated_549_residues MKRVAVGLLAMAVSTALMAATPSFDGARISRDVKELASDAYEGRGPATAGEEKTIAYLSKQFAEAGLQPGGDLANGKRAW TQAVPLRRADIVGTPTIAVQSAGQPQTLTQGKQIAIRAALDGSSTVEIANAPLVFVGYGVKAPERNWDDFKGVDLKGKIA VVLINDPDFETGKGDFDGAGMTYYGRWTYKYEEGARQGALGVLVVHETAPASYGWDTVASSNTNTMFDVVRDNPRSAHPT LEGWIQRDLATELFKHAGLDFETLKKQAQTRGFKPVELKGQRLSASYQVKSDVITSHNVVARLEGSKHPDETVIYSAHWD HIGVGKPDARGDTIFNGALDNASGTAALLELARGFAKGPTPERSVVFLAVTAEEKGLLGSEFYASKPLYPLDTTVAVINM DGMNPFVPSRDFGIYGTAKLELLDQLKSVAAQSKLRYTPDPKPQAGYFFRSDHFSFAKRGVPALSYAAGQDWEVGGVAAG KAAADDYTAKRYHQQGDEWKPDWTFAGAARDLGVLYALGQQLADSRQWPNWSQDSQFRATRDASAAARK >Mature_549_residues MKRVAVGLLAMAVSTALMAATPSFDGARISRDVKELASDAYEGRGPATAGEEKTIAYLSKQFAEAGLQPGGDLANGKRAW TQAVPLRRADIVGTPTIAVQSAGQPQTLTQGKQIAIRAALDGSSTVEIANAPLVFVGYGVKAPERNWDDFKGVDLKGKIA VVLINDPDFETGKGDFDGAGMTYYGRWTYKYEEGARQGALGVLVVHETAPASYGWDTVASSNTNTMFDVVRDNPRSAHPT LEGWIQRDLATELFKHAGLDFETLKKQAQTRGFKPVELKGQRLSASYQVKSDVITSHNVVARLEGSKHPDETVIYSAHWD HIGVGKPDARGDTIFNGALDNASGTAALLELARGFAKGPTPERSVVFLAVTAEEKGLLGSEFYASKPLYPLDTTVAVINM DGMNPFVPSRDFGIYGTAKLELLDQLKSVAAQSKLRYTPDPKPQAGYFFRSDHFSFAKRGVPALSYAAGQDWEVGGVAAG KAAADDYTAKRYHQQGDEWKPDWTFAGAARDLGVLYALGQQLADSRQWPNWSQDSQFRATRDASAAARK
Specific function: Unknown
COG id: COG2234
COG function: function code R; Predicted aminopeptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59279; Mature: 59279
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRVAVGLLAMAVSTALMAATPSFDGARISRDVKELASDAYEGRGPATAGEEKTIAYLSK CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH QFAEAGLQPGGDLANGKRAWTQAVPLRRADIVGTPTIAVQSAGQPQTLTQGKQIAIRAAL HHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCEEEECCCCCCHHCCCCEEEEEEEC DGSSTVEIANAPLVFVGYGVKAPERNWDDFKGVDLKGKIAVVLINDPDFETGKGDFDGAG CCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCC MTYYGRWTYKYEEGARQGALGVLVVHETAPASYGWDTVASSNTNTMFDVVRDNPRSAHPT EEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCH LEGWIQRDLATELFKHAGLDFETLKKQAQTRGFKPVELKGQRLSASYQVKSDVITSHNVV HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEECCCEECCEEEEHHHHCCCCCEE ARLEGSKHPDETVIYSAHWDHIGVGKPDARGDTIFNGALDNASGTAALLELARGFAKGPT EEECCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCC PERSVVFLAVTAEEKGLLGSEFYASKPLYPLDTTVAVINMDGMNPFVPSRDFGIYGTAKL CCCEEEEEEEECCCCCCCCCHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEHHHH ELLDQLKSVAAQSKLRYTPDPKPQAGYFFRSDHFSFAKRGVPALSYAAGQDWEVGGVAAG HHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCHHHHHCCCCEEECCCCCCCCCCCEECC KAAADDYTAKRYHQQGDEWKPDWTFAGAARDLGVLYALGQQLADSRQWPNWSQDSQFRAT CCCCCHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH RDASAAARK CCCHHHCCC >Mature Secondary Structure MKRVAVGLLAMAVSTALMAATPSFDGARISRDVKELASDAYEGRGPATAGEEKTIAYLSK CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH QFAEAGLQPGGDLANGKRAWTQAVPLRRADIVGTPTIAVQSAGQPQTLTQGKQIAIRAAL HHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCEEEECCCCCCHHCCCCEEEEEEEC DGSSTVEIANAPLVFVGYGVKAPERNWDDFKGVDLKGKIAVVLINDPDFETGKGDFDGAG CCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCC MTYYGRWTYKYEEGARQGALGVLVVHETAPASYGWDTVASSNTNTMFDVVRDNPRSAHPT EEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCH LEGWIQRDLATELFKHAGLDFETLKKQAQTRGFKPVELKGQRLSASYQVKSDVITSHNVV HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEECCCEECCEEEEHHHHCCCCCEE ARLEGSKHPDETVIYSAHWDHIGVGKPDARGDTIFNGALDNASGTAALLELARGFAKGPT EEECCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCC PERSVVFLAVTAEEKGLLGSEFYASKPLYPLDTTVAVINMDGMNPFVPSRDFGIYGTAKL CCCEEEEEEEECCCCCCCCCHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEHHHH ELLDQLKSVAAQSKLRYTPDPKPQAGYFFRSDHFSFAKRGVPALSYAAGQDWEVGGVAAG HHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCHHHHHCCCCEEECCCCCCCCCCCEECC KAAADDYTAKRYHQQGDEWKPDWTFAGAARDLGVLYALGQQLADSRQWPNWSQDSQFRAT CCCCCHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH RDASAAARK CCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA