Definition Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome.
Accession NC_003919
Length 5,175,554

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The map label for this gene is hrpM

Identifier: 77748543

GI number: 77748543

Start: 732331

End: 734268

Strand: Direct

Name: hrpM

Synonym: XAC0618

Alternate gene names: 77748543

Gene position: 732331-734268 (Clockwise)

Preceding gene: 21241386

Following gene: 21241390

Centisome position: 14.15

GC content: 68.01

Gene sequence:

>1938_bases
ATGGATGGCACCGTGACTCCTTCCCCGATAACGACTGCAATGCCCCCCGTTTCCGCCCTCGATGCCGGCACGCCAACGCT
GCCGCCGGAAGCGCCGCTGGCGATGCCCGAACAGAACTTGCGCGAAGGTAGCCTGCAGGTGCGCCACCAGCGCACTTCGC
CGCCCGGCATCGGCGTGCGCCGCTTCTATTTGATCGGCGGCACCTTCGCCACCACCGCCATCGCCGTATGGGTGATGCTC
AGCGTGCTGTGGCCCGACGGCATCAGCGTGCTGGAAGGCTGTCTGCTCGGCCTGTTCGTGCTGCTGTTCGCCTGGATCGC
CATGTCCTTCGCCAGCGCCGTGGCTGGCTTCGTCACCGTGGTGGCGCGCGCCGGCCGCAAGCTCGGCATCGACCCGGAGC
AACCCCTGCCCACGCTGCGCTCGCGCACCGCGTTGCTGATGCCCACCTACAACGAAGACCCGCGCCGGCTGCTGGCTGGC
CTGCAGGCCATCTACGAATCGGTCGCCGAGACCGGCCAGCTGGAGCATTTCGATTTCTTCGTGCTCAGCGACACCACCCG
CGAGCACATCGGCCGCGCCGAAGAGCTGGTCTACAACGCGTTGTGCGACCGCGTCGGCGGGCACGGCCGCATTTTCTACC
GACGCCGTGCCGACAACGCCGCGCGCAAGGCCGGCAACGTGGCCGACTGGGTGCGCCGCTTCGGCGGCAGCTACCCGCAG
ATGCTGATCCTGGACGCCGACAGCGTGATGACCGGCGACACCATCGTGCGGCTGGTCGCAGGGATGGAAAACAACCCGGA
CGTGGGCTTGATCCAGACCTTGCCGGCAGTGGTCAACGGGCAGACCCTGTTCGCCCGCATGCAGCAGTTCGGCGGCCGCG
TGTACGGGCCGATCATCGCCTTCGGTGTGGCCTGGTGGCACGGCGCCGAGAGCAACTACTGGGGCCACAACGCCATCATC
CGCACCCAGGCCTTCGCCGATCACGCCGGCCTGCCGTCGCTGCGCGGGCGCAAGCCGTTCGGCGGGCATGTGCTCAGCCA
CGACTTCGTGGAAGCGGCGCTGATGCGCCGCGGCGGCTGGGCCATGCACATGGTGCCGTACCTGCAGGGCAGCTACGAAG
AAGGCCCGCCCACGCTGACCGACCTGCTGATCCGCGACCGCCGCTGGTGCCAGGGCAACCTGCAGCACGCCAAGGTGGTC
GGCGCCAAGGGCCTGCACTGGATCAGCCGCATGCACATGCTGATCGGCATCGGGCATTACTTCACCGCCCCGATGTGGGG
TCTGTTGATGCTGATCGGCATCGGCATTCCGCTGGCCGGCGGCGATATCGATCTGGCCGGCGACCTGCCGTTCTCGCCCG
CCCGTTACTGGCATGGCAGCAGCCAGGGCAATGCGATCTGGATCTTCGTCTGCACCATGTTCGTGTTGCTGGCGCCCAAG
CTGCTCGGTTACATCGCGTTGCTGCTCAACCCGCGCGAACTGCGCGCCTGCGGCGGTGCCTTCCGCGCTGCGGTGAGCAT
CCTGCTGGAAACGGTGCTGGCCGCCTTGATGGCGCCGGTGGTGATGTACCTGCAGTCGCGCGGCGTGTTCGAGGTGCTGG
CGGGCAAGGATTCGGGCTGGGATGCGCAGGTGCGCGACGACGGCAAGCTGTCGTGGCCGGCGTTGTTGCGCAGCTATGGC
GGTCTGACCGTGTTCGGCCTGTTCATGGGTGCGGTGGCCTATGCGGTCTCGCCGGCGCTGGCCGCGTGGATGGGGCCGGT
GATCGTTGGCATGGCATTGTCGATCCCGGTGGTGGCGCTGACCTCGCTGCGTCGCACCGGCATGGCGCTGCGCCGTGCCG
GTATTTTCTGCATCCCCGAAGAACTCGACCCGCCCAAGGTGCTGGTGCGTGCGTCCGAGCTGCGCCGCGCCGCCGCGCTG
GAACCGTCGCTGATCTGA

Upstream 100 bases:

>100_bases
TCGCCCGCTCGGCCGTGTGCCAGGCAACATCGCACTGCATGGCGGGGATGGACCTCCCGTGTCAGCCCGCACTGTCGTCC
TCGCGCGACGGGCAGCCCTG

Downstream 100 bases:

>100_bases
GGAGTGCGCATCGGCGCTGGTCTCGCTGGCCGGCGCTGTTGCGTTGTCGCGTGGAGGAGGCCCGTGGCGATCCGCGGGCC
TCAAGCCTCTGGCGCCAGCT

Product: glucosyltransferase MdoH

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 645; Mature: 645

Protein sequence:

>645_residues
MDGTVTPSPITTAMPPVSALDAGTPTLPPEAPLAMPEQNLREGSLQVRHQRTSPPGIGVRRFYLIGGTFATTAIAVWVML
SVLWPDGISVLEGCLLGLFVLLFAWIAMSFASAVAGFVTVVARAGRKLGIDPEQPLPTLRSRTALLMPTYNEDPRRLLAG
LQAIYESVAETGQLEHFDFFVLSDTTREHIGRAEELVYNALCDRVGGHGRIFYRRRADNAARKAGNVADWVRRFGGSYPQ
MLILDADSVMTGDTIVRLVAGMENNPDVGLIQTLPAVVNGQTLFARMQQFGGRVYGPIIAFGVAWWHGAESNYWGHNAII
RTQAFADHAGLPSLRGRKPFGGHVLSHDFVEAALMRRGGWAMHMVPYLQGSYEEGPPTLTDLLIRDRRWCQGNLQHAKVV
GAKGLHWISRMHMLIGIGHYFTAPMWGLLMLIGIGIPLAGGDIDLAGDLPFSPARYWHGSSQGNAIWIFVCTMFVLLAPK
LLGYIALLLNPRELRACGGAFRAAVSILLETVLAALMAPVVMYLQSRGVFEVLAGKDSGWDAQVRDDGKLSWPALLRSYG
GLTVFGLFMGAVAYAVSPALAAWMGPVIVGMALSIPVVALTSLRRTGMALRRAGIFCIPEELDPPKVLVRASELRRAAAL
EPSLI

Sequences:

>Translated_645_residues
MDGTVTPSPITTAMPPVSALDAGTPTLPPEAPLAMPEQNLREGSLQVRHQRTSPPGIGVRRFYLIGGTFATTAIAVWVML
SVLWPDGISVLEGCLLGLFVLLFAWIAMSFASAVAGFVTVVARAGRKLGIDPEQPLPTLRSRTALLMPTYNEDPRRLLAG
LQAIYESVAETGQLEHFDFFVLSDTTREHIGRAEELVYNALCDRVGGHGRIFYRRRADNAARKAGNVADWVRRFGGSYPQ
MLILDADSVMTGDTIVRLVAGMENNPDVGLIQTLPAVVNGQTLFARMQQFGGRVYGPIIAFGVAWWHGAESNYWGHNAII
RTQAFADHAGLPSLRGRKPFGGHVLSHDFVEAALMRRGGWAMHMVPYLQGSYEEGPPTLTDLLIRDRRWCQGNLQHAKVV
GAKGLHWISRMHMLIGIGHYFTAPMWGLLMLIGIGIPLAGGDIDLAGDLPFSPARYWHGSSQGNAIWIFVCTMFVLLAPK
LLGYIALLLNPRELRACGGAFRAAVSILLETVLAALMAPVVMYLQSRGVFEVLAGKDSGWDAQVRDDGKLSWPALLRSYG
GLTVFGLFMGAVAYAVSPALAAWMGPVIVGMALSIPVVALTSLRRTGMALRRAGIFCIPEELDPPKVLVRASELRRAAAL
EPSLI
>Mature_645_residues
MDGTVTPSPITTAMPPVSALDAGTPTLPPEAPLAMPEQNLREGSLQVRHQRTSPPGIGVRRFYLIGGTFATTAIAVWVML
SVLWPDGISVLEGCLLGLFVLLFAWIAMSFASAVAGFVTVVARAGRKLGIDPEQPLPTLRSRTALLMPTYNEDPRRLLAG
LQAIYESVAETGQLEHFDFFVLSDTTREHIGRAEELVYNALCDRVGGHGRIFYRRRADNAARKAGNVADWVRRFGGSYPQ
MLILDADSVMTGDTIVRLVAGMENNPDVGLIQTLPAVVNGQTLFARMQQFGGRVYGPIIAFGVAWWHGAESNYWGHNAII
RTQAFADHAGLPSLRGRKPFGGHVLSHDFVEAALMRRGGWAMHMVPYLQGSYEEGPPTLTDLLIRDRRWCQGNLQHAKVV
GAKGLHWISRMHMLIGIGHYFTAPMWGLLMLIGIGIPLAGGDIDLAGDLPFSPARYWHGSSQGNAIWIFVCTMFVLLAPK
LLGYIALLLNPRELRACGGAFRAAVSILLETVLAALMAPVVMYLQSRGVFEVLAGKDSGWDAQVRDDGKLSWPALLRSYG
GLTVFGLFMGAVAYAVSPALAAWMGPVIVGMALSIPVVALTSLRRTGMALRRAGIFCIPEELDPPKVLVRASELRRAAAL
EPSLI

Specific function: Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)

COG id: COG2943

COG function: function code M; Membrane glycosyltransferase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. OpgH subfamily

Homologues:

Organism=Escherichia coli, GI1787287, Length=616, Percent_Identity=37.987012987013, Blast_Score=387, Evalue=1e-108,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): OPGH_XANAC (Q8PPR7)

Other databases:

- EMBL:   AE008923
- RefSeq:   NP_640971.2
- ProteinModelPortal:   Q8PPR7
- GeneID:   1154689
- GenomeReviews:   AE008923_GR
- KEGG:   xac:XAC0618
- NMPDR:   fig|190486.1.peg.615
- HOGENOM:   HBG668600
- OMA:   MSGECLT
- ProtClustDB:   PRK05454
- BioCyc:   XAXO190486:XAC0618-MONOMER
- HAMAP:   MF_01072
- InterPro:   IPR001173

Pfam domain/function: PF00535 Glycos_transf_2

EC number: 2.4.1.- [C]

Molecular weight: Translated: 70049; Mature: 70049

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xce1cdb0)-; HASH(0xd5139d0)-; HASH(0xcfe3168)-; HASH(0xc969a90)-; HASH(0xd4214d4)-; HASH(0xcb760fc)-;

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGTVTPSPITTAMPPVSALDAGTPTLPPEAPLAMPEQNLREGSLQVRHQRTSPPGIGVR
CCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHCCCCCEEEECCCCCCCCCCE
RFYLIGGTFATTAIAVWVMLSVLWPDGISVLEGCLLGLFVLLFAWIAMSFASAVAGFVTV
EEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VARAGRKLGIDPEQPLPTLRSRTALLMPTYNEDPRRLLAGLQAIYESVAETGQLEHFDFF
HHHCCCCCCCCCCCCCCHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEE
VLSDTTREHIGRAEELVYNALCDRVGGHGRIFYRRRADNAARKAGNVADWVRRFGGSYPQ
EECCCHHHHHCHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHCCCHHHHHHHHCCCCCE
MLILDADSVMTGDTIVRLVAGMENNPDVGLIQTLPAVVNGQTLFARMQQFGGRVYGPIIA
EEEEECCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHH
FGVAWWHGAESNYWGHNAIIRTQAFADHAGLPSLRGRKPFGGHVLSHDFVEAALMRRGGW
HHHHHHCCCCCCCCCCCEEEEEHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
AMHMVPYLQGSYEEGPPTLTDLLIRDRRWCQGNLQHAKVVGAKGLHWISRMHMLIGIGHY
CEEHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHH
FTAPMWGLLMLIGIGIPLAGGDIDLAGDLPFSPARYWHGSSQGNAIWIFVCTMFVLLAPK
HHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCHHCCCCCCCCEEEHHHHHHHHHHHHH
LLGYIALLLNPRELRACGGAFRAAVSILLETVLAALMAPVVMYLQSRGVFEVLAGKDSGW
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCC
DAQVRDDGKLSWPALLRSYGGLTVFGLFMGAVAYAVSPALAAWMGPVIVGMALSIPVVAL
CCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSLRRTGMALRRAGIFCIPEELDPPKVLVRASELRRAAALEPSLI
HHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCH
>Mature Secondary Structure
MDGTVTPSPITTAMPPVSALDAGTPTLPPEAPLAMPEQNLREGSLQVRHQRTSPPGIGVR
CCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHCCCCCEEEECCCCCCCCCCE
RFYLIGGTFATTAIAVWVMLSVLWPDGISVLEGCLLGLFVLLFAWIAMSFASAVAGFVTV
EEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VARAGRKLGIDPEQPLPTLRSRTALLMPTYNEDPRRLLAGLQAIYESVAETGQLEHFDFF
HHHCCCCCCCCCCCCCCHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEE
VLSDTTREHIGRAEELVYNALCDRVGGHGRIFYRRRADNAARKAGNVADWVRRFGGSYPQ
EECCCHHHHHCHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHCCCHHHHHHHHCCCCCE
MLILDADSVMTGDTIVRLVAGMENNPDVGLIQTLPAVVNGQTLFARMQQFGGRVYGPIIA
EEEEECCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHH
FGVAWWHGAESNYWGHNAIIRTQAFADHAGLPSLRGRKPFGGHVLSHDFVEAALMRRGGW
HHHHHHCCCCCCCCCCCEEEEEHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
AMHMVPYLQGSYEEGPPTLTDLLIRDRRWCQGNLQHAKVVGAKGLHWISRMHMLIGIGHY
CEEHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHH
FTAPMWGLLMLIGIGIPLAGGDIDLAGDLPFSPARYWHGSSQGNAIWIFVCTMFVLLAPK
HHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCHHCCCCCCCCEEEHHHHHHHHHHHHH
LLGYIALLLNPRELRACGGAFRAAVSILLETVLAALMAPVVMYLQSRGVFEVLAGKDSGW
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCC
DAQVRDDGKLSWPALLRSYGGLTVFGLFMGAVAYAVSPALAAWMGPVIVGMALSIPVVAL
CCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSLRRTGMALRRAGIFCIPEELDPPKVLVRASELRRAAALEPSLI
HHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12024217