| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is phaE [H]
Identifier: 21241232
GI number: 21241232
Start: 547366
End: 547872
Strand: Reverse
Name: phaE [H]
Synonym: XAC0459
Alternate gene names: 21241232
Gene position: 547872-547366 (Counterclockwise)
Preceding gene: 21241233
Following gene: 21241231
Centisome position: 10.59
GC content: 62.92
Gene sequence:
>507_bases ATGAACACGCGTCTGCCACTGCGTCGCCGCGTATTCCCATCGCCGCCGCTGAGCGTAACGGTCTTCGTCTTCTGGCTGCT GCTCAGCGATAGCTTCGGCCCGCAGCAATGGGTCTTGGGCATGCTGCTGGGCGTGGTGGTGCCGATCTTCGCGGCGCGAC TGGACCGCGAGTTCGCACAGATCGGCTCGTTGCGCTCGGTGCCGCGCATGCTGCTGGTGGCCGCGGGCGACATCGTGCGC TCCAACATCAAGGTGGCTGCGCAGGTGCTCGGACCCGAATCGCATATCCATCCCGGCTTCATCTGGGTACCGCTGGATAT CGCCAACATTCACGGCATCGCCGCGTTGACCAGCATGATCACGCTGACGCCGGGGACCGTCTCGGCCGCGCTGTCGGACG ACCGTAAATATCTGCTGGTGCACGTGCTGCATCTGGACGATCCGGAGGCCTTGATTGCCGAGATCAAGACCCGCTACGAA AAGCCCCTGATGGAGATCTTTCCATGA
Upstream 100 bases:
>100_bases GTCCCTTGATGCATTACACCGATGCGGCCGCTGCGCAGTTGCGCGACCCCGGCGCGTATGTGGACCAGATACGCGCCACC ACGCCGCAACGGAGGCAGCC
Downstream 100 bases:
>100_bases CCGGCCACATGTTCATCGAGTCGACCATCGTGATCTGCATGCATGCGGTGGGCCTGGCCATCCTGATGGCCTTGTGGCGG CTGCTGCGCGGGCCGACCGT
Product: monovalent cation/H+ antiporter subunit E
Products: NA
Alternate protein names: Mnh complex subunit E1 [H]
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MNTRLPLRRRVFPSPPLSVTVFVFWLLLSDSFGPQQWVLGMLLGVVVPIFAARLDREFAQIGSLRSVPRMLLVAAGDIVR SNIKVAAQVLGPESHIHPGFIWVPLDIANIHGIAALTSMITLTPGTVSAALSDDRKYLLVHVLHLDDPEALIAEIKTRYE KPLMEIFP
Sequences:
>Translated_168_residues MNTRLPLRRRVFPSPPLSVTVFVFWLLLSDSFGPQQWVLGMLLGVVVPIFAARLDREFAQIGSLRSVPRMLLVAAGDIVR SNIKVAAQVLGPESHIHPGFIWVPLDIANIHGIAALTSMITLTPGTVSAALSDDRKYLLVHVLHLDDPEALIAEIKTRYE KPLMEIFP >Mature_168_residues MNTRLPLRRRVFPSPPLSVTVFVFWLLLSDSFGPQQWVLGMLLGVVVPIFAARLDREFAQIGSLRSVPRMLLVAAGDIVR SNIKVAAQVLGPESHIHPGFIWVPLDIANIHGIAALTSMITLTPGTVSAALSDDRKYLLVHVLHLDDPEALIAEIKTRYE KPLMEIFP
Specific function: Mnh complex is a Na(+)/H(+) antiporter involved in Na(+) excretion [H]
COG id: COG1863
COG function: function code P; Multisubunit Na+/H+ antiporter, MnhE subunit
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CPA3 antiporters (TC 2.A.63) subunit E family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004847 - InterPro: IPR002758 [H]
Pfam domain/function: PF01899 MNHE [H]
EC number: NA
Molecular weight: Translated: 18609; Mature: 18609
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTRLPLRRRVFPSPPLSVTVFVFWLLLSDSFGPQQWVLGMLLGVVVPIFAARLDREFAQ CCCCCCCHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IGSLRSVPRMLLVAAGDIVRSNIKVAAQVLGPESHIHPGFIWVPLDIANIHGIAALTSMI HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHHHHHHHHHHH TLTPGTVSAALSDDRKYLLVHVLHLDDPEALIAEIKTRYEKPLMEIFP HCCCCCHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHHCHHHHHCC >Mature Secondary Structure MNTRLPLRRRVFPSPPLSVTVFVFWLLLSDSFGPQQWVLGMLLGVVVPIFAARLDREFAQ CCCCCCCHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IGSLRSVPRMLLVAAGDIVRSNIKVAAQVLGPESHIHPGFIWVPLDIANIHGIAALTSMI HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHHHHHHHHHHH TLTPGTVSAALSDDRKYLLVHVLHLDDPEALIAEIKTRYEKPLMEIFP HCCCCCHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHHCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA