Click here to switch to the map view.

The map label for this gene is phaF [H]

Identifier: 21241231

GI number: 21241231

Start: 547085

End: 547357

Strand: Reverse

Name: phaF [H]

Synonym: XAC0458

Alternate gene names: 21241231

Gene position: 547357-547085 (Counterclockwise)

Preceding gene: 21241232

Following gene: 21241230

Centisome position: 10.58

GC content: 61.17

Gene sequence:

>273_bases
ATGTTCATCGAGTCGACCATCGTGATCTGCATGCATGCGGTGGGCCTGGCCATCCTGATGGCCTTGTGGCGGCTGCTGCG
CGGGCCGACCGTGCCAGACCGCATCCTGGCGCTGGATACGCTCTCGGTCACCGCCATCGCCGAATTGATGCTGCTGGGCA
TGTATCTGGATTCACCGATCTATTTCGAGGCTGCCCTGGTCATTGCGATGCTGGGCTTCGGCAGCACCGTGGTGCTGAGC
AAATACGTGCTGCGGCGGAGCATCGTCGAATGA

Upstream 100 bases:

>100_bases
TGGTGCACGTGCTGCATCTGGACGATCCGGAGGCCTTGATTGCCGAGATCAAGACCCGCTACGAAAAGCCCCTGATGGAG
ATCTTTCCATGACCGGCCAC

Downstream 100 bases:

>100_bases
TCGCCTTCACCGAATACCTACTCAGCGCCTTGCTGCTGGCGGGCACGTTCTTCATCCTGATCGGCGCTTTTGGCCTGGTG
AAGCTGTCGGATTTTTTCAA

Product: monovalent cation/H+ antiporter subunit F

Products: NA

Alternate protein names: pH adaptation potassium efflux system protein F; Pha system subunit F [H]

Number of amino acids: Translated: 90; Mature: 90

Protein sequence:

>90_residues
MFIESTIVICMHAVGLAILMALWRLLRGPTVPDRILALDTLSVTAIAELMLLGMYLDSPIYFEAALVIAMLGFGSTVVLS
KYVLRRSIVE

Sequences:

>Translated_90_residues
MFIESTIVICMHAVGLAILMALWRLLRGPTVPDRILALDTLSVTAIAELMLLGMYLDSPIYFEAALVIAMLGFGSTVVLS
KYVLRRSIVE
>Mature_90_residues
MFIESTIVICMHAVGLAILMALWRLLRGPTVPDRILALDTLSVTAIAELMLLGMYLDSPIYFEAALVIAMLGFGSTVVLS
KYVLRRSIVE

Specific function: Part of a K(+) efflux system which is required for the adaptation of R.meliloti to alkaline pH as well as for the infection process during symbiotic nodule development [H]

COG id: COG2212

COG function: function code P; Multisubunit Na+/H+ antiporter, MnhF subunit

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CPA3 antiporters (TC 2.A.63) subunit F family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007208 [H]

Pfam domain/function: PF04066 MrpF_PhaF [H]

EC number: NA

Molecular weight: Translated: 9899; Mature: 9899

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
6.7 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
6.7 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIESTIVICMHAVGLAILMALWRLLRGPTVPDRILALDTLSVTAIAELMLLGMYLDSPI
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCH
YFEAALVIAMLGFGSTVVLSKYVLRRSIVE
HHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFIESTIVICMHAVGLAILMALWRLLRGPTVPDRILALDTLSVTAIAELMLLGMYLDSPI
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCH
YFEAALVIAMLGFGSTVVLSKYVLRRSIVE
HHHHHHHHHHHHCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680201; 11481430 [H]