| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241112
Identifier: 21241112
GI number: 21241112
Start: 403716
End: 405365
Strand: Reverse
Name: 21241112
Synonym: XAC0338
Alternate gene names: NA
Gene position: 405365-403716 (Counterclockwise)
Preceding gene: 21241113
Following gene: 21241111
Centisome position: 7.83
GC content: 64.85
Gene sequence:
>1650_bases GTGACACAAGGGCGCGACAGCGAGGTTCGGCAGTGTCACCAAACTGACATCAAATCTAAATATAACTGCTGCCATTGCCG CTACGTCAGGACGACCGGCGCCTGGCAGGCGCTTCCACGCCGTGCAGCCGCCCTCTTGGCAGCACCGGATCGACGCAGCC GCCGACCCGTTTCCCTTGCACGAGCCGGACCAATGAAAAAACGCAATCTCGCCACTGTTCTGTGCGCCCTCAGCGCGACC GCCAGCGGCAGCACGCTGGCCGCCGAGCTGGAGTTGTACGTCGACCGCAAGACCAAGCAGATCTTCGCCGAGCCGGCGCC AGGTCGCGACAAGTTGGGCACCTTCGTGCAGGTGGACGAAAACGGCAAGCTGCCGGCATCGGCGATGCCGGCCGTGCCCG CACAACCGCTGCCGCCCGCGCCGGGCGCCGCCACGCCCGCGGACGCCGCCATTGCCCAGGTCGCACCTATGCCGGCGCCG GTTGCAACGCCAGCGCCGGCCAAGTCCGGCGACGCCGGCAAGAAGTGGTACGACAAACTCAGCCTGCGCGGCTACACCCA GATCCGTTACAACCAGGGCATCGGCGGCGATGCGCAGGACCTGCGCGCGCCGGGCGACCGCTTTATCGGCAACGACCAGA GCCTGGGCATCCGCCGTGCGCGCCTGGTGCTGAGTGGCGATCTCAACGAGCATGTGTCGCTGTATTTCCAGCCGGATTTT GCCAGCACGCCCACTGGCTCCACCACCTCCAACTTTGCGCAGCTGCGCGACGCCTACGCCGATATCTTCTTCGACAAGAA GCGCGAATACCGCGTGCGTGTGGGTCAATCGAAAATGCCGTACGGCTGGGAAAATCTGCAGTCCAGCCAGAACCGGCTCT CGCTGGATCGCGCCGATGCATTGAACTCCGGCCTGCGCGACGAACGCGATATCGGTGCGGTGTTCTATTACAGCCCCACC GTGGCCAAGGGCCGCTTCCAGGACTTGGTCAAGTCGGGATTGAAGGGGTCGGGCGACTACGGCGTGATCGGTGCCGGTGT GTACAACGGCCAGGGCGCCAACCGCGCCGAGCGTAACGACAGCATGCACGCGGTGGTGCACGCCACCTACCCGTTCAAGT TCGCCAACGGCCAGTATCTGGAAGTGGGCGCCGACGCCTACGCCGGCCGCTTCGTGCCGACCGCGGCAGCAGTGAATATC GGCGGCCGCAGCTTTACCCCGGCCATCACCGAGCCCAATGGCTATACCGACCAGCGCGTGGCCGCGCACATCATCTATTA CCCGCAGCCGTTCGGCCTGCAGGCGGAGTGGACGGTGGGCCGTGGCCCGGAACTGGATGTGGCCCAGCGCCGCATCCGCA CCCGCTCGCTGAGCGGCGGCTATGTGCAGGCCATGTTCAAGCACGACTTCAACTACGGCACCTTGCTGCCGTACCTGAAA TGGCAGACCTACCGCGGCGGCTCCAAGTTCGACACCAATGCCCCGCGCATGCGTCTGGACGAAGTGGAAGCCGGTGTCGA ATGGCAGCCGATGGATGCGCTGGAACTGGTGTTCGCCTATTCGAAGATGAAGCGTACCGACGTCGGCACCGCGCCGTATC CGGTCGTTGAAGGCGATTTGCTGCGCCTGCAGTTGCAGGTCAATTACTGA
Upstream 100 bases:
>100_bases CACGTTCCGGATGCAGTTCTGTTCGACCACCTTCATCACATCGCGCGCAGCTGGGCTCGCCTCACGTTGGTCGCATAACT GCCATCGCCCCGACACGACG
Downstream 100 bases:
>100_bases GCAAGGTCGGCAGCGCCGGTCATCGCTGCTGCGGCGGTCATGACCGGTGCATTCGTGTGCGGCTGCGTGCGTTCGCGCCG GGATCTGCATGCACGCAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphate-Selective Porin
Number of amino acids: Translated: 549; Mature: 548
Protein sequence:
>549_residues MTQGRDSEVRQCHQTDIKSKYNCCHCRYVRTTGAWQALPRRAAALLAAPDRRSRRPVSLARAGPMKKRNLATVLCALSAT ASGSTLAAELELYVDRKTKQIFAEPAPGRDKLGTFVQVDENGKLPASAMPAVPAQPLPPAPGAATPADAAIAQVAPMPAP VATPAPAKSGDAGKKWYDKLSLRGYTQIRYNQGIGGDAQDLRAPGDRFIGNDQSLGIRRARLVLSGDLNEHVSLYFQPDF ASTPTGSTTSNFAQLRDAYADIFFDKKREYRVRVGQSKMPYGWENLQSSQNRLSLDRADALNSGLRDERDIGAVFYYSPT VAKGRFQDLVKSGLKGSGDYGVIGAGVYNGQGANRAERNDSMHAVVHATYPFKFANGQYLEVGADAYAGRFVPTAAAVNI GGRSFTPAITEPNGYTDQRVAAHIIYYPQPFGLQAEWTVGRGPELDVAQRRIRTRSLSGGYVQAMFKHDFNYGTLLPYLK WQTYRGGSKFDTNAPRMRLDEVEAGVEWQPMDALELVFAYSKMKRTDVGTAPYPVVEGDLLRLQLQVNY
Sequences:
>Translated_549_residues MTQGRDSEVRQCHQTDIKSKYNCCHCRYVRTTGAWQALPRRAAALLAAPDRRSRRPVSLARAGPMKKRNLATVLCALSAT ASGSTLAAELELYVDRKTKQIFAEPAPGRDKLGTFVQVDENGKLPASAMPAVPAQPLPPAPGAATPADAAIAQVAPMPAP VATPAPAKSGDAGKKWYDKLSLRGYTQIRYNQGIGGDAQDLRAPGDRFIGNDQSLGIRRARLVLSGDLNEHVSLYFQPDF ASTPTGSTTSNFAQLRDAYADIFFDKKREYRVRVGQSKMPYGWENLQSSQNRLSLDRADALNSGLRDERDIGAVFYYSPT VAKGRFQDLVKSGLKGSGDYGVIGAGVYNGQGANRAERNDSMHAVVHATYPFKFANGQYLEVGADAYAGRFVPTAAAVNI GGRSFTPAITEPNGYTDQRVAAHIIYYPQPFGLQAEWTVGRGPELDVAQRRIRTRSLSGGYVQAMFKHDFNYGTLLPYLK WQTYRGGSKFDTNAPRMRLDEVEAGVEWQPMDALELVFAYSKMKRTDVGTAPYPVVEGDLLRLQLQVNY >Mature_548_residues TQGRDSEVRQCHQTDIKSKYNCCHCRYVRTTGAWQALPRRAAALLAAPDRRSRRPVSLARAGPMKKRNLATVLCALSATA SGSTLAAELELYVDRKTKQIFAEPAPGRDKLGTFVQVDENGKLPASAMPAVPAQPLPPAPGAATPADAAIAQVAPMPAPV ATPAPAKSGDAGKKWYDKLSLRGYTQIRYNQGIGGDAQDLRAPGDRFIGNDQSLGIRRARLVLSGDLNEHVSLYFQPDFA STPTGSTTSNFAQLRDAYADIFFDKKREYRVRVGQSKMPYGWENLQSSQNRLSLDRADALNSGLRDERDIGAVFYYSPTV AKGRFQDLVKSGLKGSGDYGVIGAGVYNGQGANRAERNDSMHAVVHATYPFKFANGQYLEVGADAYAGRFVPTAAAVNIG GRSFTPAITEPNGYTDQRVAAHIIYYPQPFGLQAEWTVGRGPELDVAQRRIRTRSLSGGYVQAMFKHDFNYGTLLPYLKW QTYRGGSKFDTNAPRMRLDEVEAGVEWQPMDALELVFAYSKMKRTDVGTAPYPVVEGDLLRLQLQVNY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60183; Mature: 60051
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQGRDSEVRQCHQTDIKSKYNCCHCRYVRTTGAWQALPRRAAALLAAPDRRSRRPVSLA CCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCEEHH RAGPMKKRNLATVLCALSATASGSTLAAELELYVDRKTKQIFAEPAPGRDKLGTFVQVDE HCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCHHHCCCCCCCCCCCCCEEEECC NGKLPASAMPAVPAQPLPPAPGAATPADAAIAQVAPMPAPVATPAPAKSGDAGKKWYDKL CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH SLRGYTQIRYNQGIGGDAQDLRAPGDRFIGNDQSLGIRRARLVLSGDLNEHVSLYFQPDF CCCEEEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEECCCC ASTPTGSTTSNFAQLRDAYADIFFDKKREYRVRVGQSKMPYGWENLQSSQNRLSLDRADA CCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHCCHHHCCCHHHHH LNSGLRDERDIGAVFYYSPTVAKGRFQDLVKSGLKGSGDYGVIGAGVYNGQGANRAERND HHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEEECEECCCCCCCCCCCC SMHAVVHATYPFKFANGQYLEVGADAYAGRFVPTAAAVNIGGRSFTPAITEPNGYTDQRV CEEEEEEEECCEEECCCCEEEECCCHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCE AAHIIYYPQPFGLQAEWTVGRGPELDVAQRRIRTRSLSGGYVQAMFKHDFNYGTLLPYLK EEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEHHHHCCCCCCCCCCEE WQTYRGGSKFDTNAPRMRLDEVEAGVEWQPMDALELVFAYSKMKRTDVGTAPYPVVEGDL EEEECCCCCCCCCCCCEEHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEECCCE LRLQLQVNY EEEEEEECC >Mature Secondary Structure TQGRDSEVRQCHQTDIKSKYNCCHCRYVRTTGAWQALPRRAAALLAAPDRRSRRPVSLA CCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCEEHH RAGPMKKRNLATVLCALSATASGSTLAAELELYVDRKTKQIFAEPAPGRDKLGTFVQVDE HCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCHHHCCCCCCCCCCCCCEEEECC NGKLPASAMPAVPAQPLPPAPGAATPADAAIAQVAPMPAPVATPAPAKSGDAGKKWYDKL CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH SLRGYTQIRYNQGIGGDAQDLRAPGDRFIGNDQSLGIRRARLVLSGDLNEHVSLYFQPDF CCCEEEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEECCCC ASTPTGSTTSNFAQLRDAYADIFFDKKREYRVRVGQSKMPYGWENLQSSQNRLSLDRADA CCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHCCHHHCCCHHHHH LNSGLRDERDIGAVFYYSPTVAKGRFQDLVKSGLKGSGDYGVIGAGVYNGQGANRAERND HHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEEECEECCCCCCCCCCCC SMHAVVHATYPFKFANGQYLEVGADAYAGRFVPTAAAVNIGGRSFTPAITEPNGYTDQRV CEEEEEEEECCEEECCCCEEEECCCHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCE AAHIIYYPQPFGLQAEWTVGRGPELDVAQRRIRTRSLSGGYVQAMFKHDFNYGTLLPYLK EEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEHHHHCCCCCCCCCCEE WQTYRGGSKFDTNAPRMRLDEVEAGVEWQPMDALELVFAYSKMKRTDVGTAPYPVVEGDL EEEECCCCCCCCCCCCEEHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEECCCE LRLQLQVNY EEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA