| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is qorB [H]
Identifier: 21241113
GI number: 21241113
Start: 405999
End: 406877
Strand: Reverse
Name: qorB [H]
Synonym: XAC0339
Alternate gene names: 21241113
Gene position: 406877-405999 (Counterclockwise)
Preceding gene: 21241115
Following gene: 21241112
Centisome position: 7.86
GC content: 68.83
Gene sequence:
>879_bases ATGACCTCTATATCCCCCCTGACTCTTGTCACCGGCGCCAGCGGGCAGTTGGGTGCGCTGGTGGTCGAAGCGCTGCTTGG CCATCTGCCTGCAAACCGCATCGTAGCAACGGCCCGGGATACCGCGTCACTTGCCGAGTTCGCAAAACGCGACATCGCGG TACGTCAGGCCGACTATGCGAACCCGCAAAGCCTGGACACGGCCTTCGCCGGCGTGGGCCGCGTGTTGCTGGTCTCGTCC AATGCGGTCGGCCAGCGCGTGCCGCAACACCGCAACGTGATCGAGGCAGCCAAGCGCGCCGGGGTGGAGCTGCTGGCGTA TACGAGCATCCTGCATGCCGACACCAGCACGCTGTCGCTGGCCGCCGAGCATGTGGCCACCGAGGCGCTGCTGCGCGAGA GCGGCGTGCCGCACGCGTTGTTGCGCAATGGCTGGTACACCGAGAACTACACCGGCTCGATCGCTGCAGAGGTCGCCCAC GGCGCAGTGATCGGCAGTGCGGGCGAAGGCAGGATCAGCGCCGCCACGCGCGCCGACTATGCCGCGGCCGCTGCAGCAGT GCTGGCGTCGGATGCACCGCAGGCCGGGCAGGTGTACGAGCTGGCAGGCGATACCGCTTTCACGATGGCCGAGTACGCCG CCGAGGTGGCGCAGCAGTCGGGCAAGCCGGTGGCCTATCACGACCTGCCGGAAGTCGATTACGCGGCAGCGCTGGTGCAG ATCGGCCTGCCGGCCGGCTTTGCGCAGGTGCTGGCGCAGTGCTCGGCCGCTTCGCGCGACGGCGCCCTGTTCGATGATCG CCATACGCTGAGCCGGTTGATCGGTCGCCCCACCACGCCGTTGCGCGACGCGGTGGCGGCGGCGCTCGCAGCGCGCTGA
Upstream 100 bases:
>100_bases GCCTCCTTGCGGAGGCCTGAGCGGCGCTGACACTATGCAGGCGATCAGTTAGGTCTAGATAGTAGACCAAATCTCTTATG CAAACCTACCGGAGCCCGTC
Downstream 100 bases:
>100_bases GTCACGGCCGGGACCACTGCGCTGCCGAGCCGTCGGCACGCAGTGGTTCGCGCATCGTTGAGCAGGTGCGCCATGACCGC CTGGGATCACGGCGAAACCT
Product: oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MTSISPLTLVTGASGQLGALVVEALLGHLPANRIVATARDTASLAEFAKRDIAVRQADYANPQSLDTAFAGVGRVLLVSS NAVGQRVPQHRNVIEAAKRAGVELLAYTSILHADTSTLSLAAEHVATEALLRESGVPHALLRNGWYTENYTGSIAAEVAH GAVIGSAGEGRISAATRADYAAAAAAVLASDAPQAGQVYELAGDTAFTMAEYAAEVAQQSGKPVAYHDLPEVDYAAALVQ IGLPAGFAQVLAQCSAASRDGALFDDRHTLSRLIGRPTTPLRDAVAAALAAR
Sequences:
>Translated_292_residues MTSISPLTLVTGASGQLGALVVEALLGHLPANRIVATARDTASLAEFAKRDIAVRQADYANPQSLDTAFAGVGRVLLVSS NAVGQRVPQHRNVIEAAKRAGVELLAYTSILHADTSTLSLAAEHVATEALLRESGVPHALLRNGWYTENYTGSIAAEVAH GAVIGSAGEGRISAATRADYAAAAAAVLASDAPQAGQVYELAGDTAFTMAEYAAEVAQQSGKPVAYHDLPEVDYAAALVQ IGLPAGFAQVLAQCSAASRDGALFDDRHTLSRLIGRPTTPLRDAVAAALAAR >Mature_291_residues TSISPLTLVTGASGQLGALVVEALLGHLPANRIVATARDTASLAEFAKRDIAVRQADYANPQSLDTAFAGVGRVLLVSSN AVGQRVPQHRNVIEAAKRAGVELLAYTSILHADTSTLSLAAEHVATEALLRESGVPHALLRNGWYTENYTGSIAAEVAHG AVIGSAGEGRISAATRADYAAAAAAVLASDAPQAGQVYELAGDTAFTMAEYAAEVAQQSGKPVAYHDLPEVDYAAALVQI GLPAGFAQVLAQCSAASRDGALFDDRHTLSRLIGRPTTPLRDAVAAALAAR
Specific function: Quinone oxidoreductase that may play some additional role beyond quinone reduction. Potential redox sensor protein. Overexpression induces retardation of growth [H]
COG id: COG0702
COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NmrA-type oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI1790656, Length=277, Percent_Identity=55.2346570397112, Blast_Score=283, Evalue=9e-78,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR008030 [H]
Pfam domain/function: PF05368 NmrA [H]
EC number: =1.6.5.2 [H]
Molecular weight: Translated: 30074; Mature: 29943
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSISPLTLVTGASGQLGALVVEALLGHLPANRIVATARDTASLAEFAKRDIAVRQADYA CCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCC NPQSLDTAFAGVGRVLLVSSNAVGQRVPQHRNVIEAAKRAGVELLAYTSILHADTSTLSL CHHHHHHHHHHCCEEEEEECCHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHH AAEHVATEALLRESGVPHALLRNGWYTENYTGSIAAEVAHGAVIGSAGEGRISAATRADY HHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHCCEECCCCCCCEEHHHHHHH AAAAAAVLASDAPQAGQVYELAGDTAFTMAEYAAEVAQQSGKPVAYHDLPEVDYAAALVQ HHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHH IGLPAGFAQVLAQCSAASRDGALFDDRHTLSRLIGRPTTPLRDAVAAALAAR HCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCC >Mature Secondary Structure TSISPLTLVTGASGQLGALVVEALLGHLPANRIVATARDTASLAEFAKRDIAVRQADYA CCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCC NPQSLDTAFAGVGRVLLVSSNAVGQRVPQHRNVIEAAKRAGVELLAYTSILHADTSTLSL CHHHHHHHHHHCCEEEEEECCHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHH AAEHVATEALLRESGVPHALLRNGWYTENYTGSIAAEVAHGAVIGSAGEGRISAATRADY HHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHCCEECCCCCCCEEHHHHHHH AAAAAAVLASDAPQAGQVYELAGDTAFTMAEYAAEVAQQSGKPVAYHDLPEVDYAAALVQ HHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHH IGLPAGFAQVLAQCSAASRDGALFDDRHTLSRLIGRPTTPLRDAVAAALAAR HCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]