| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21240829
Identifier: 21240829
GI number: 21240829
Start: 67144
End: 68472
Strand: Reverse
Name: 21240829
Synonym: XAC0055
Alternate gene names: NA
Gene position: 68472-67144 (Counterclockwise)
Preceding gene: 21240830
Following gene: 21240828
Centisome position: 1.32
GC content: 67.12
Gene sequence:
>1329_bases GTGCTGGCGATACGGCGTGGCGCTTCCATGCCTCCCTTGAACCGCAGCGACGATCTGATGCCGGGTATAGACGAGATCCC TGAACGCCGTGACGAGGTCTCCCTGGGCGATCTATTGCTGGAAGTGCTGCGCTTCTACCAACAGTTCGGCCGCCTGCTGA TTCCGCTGGCCGTGCTGTGCGGCGTACTGGCCGGCGTGGTCGTCGCCACGCGGCCCCTGTATGCGGTCACCGCGCTGCTG GAAACGCCGCAGATGAGCCTGGAACAATGGCGCAAGCTGCAACCCATGCTGGCCGACCGTCAGTTGGTGGCGGCCTCGCT CGCCAGCATGACCGAGCTGCCGCCGGAGCAGCGCGAACGCCTGCAACGCGCCTTCGTGCTCAAGAAATACTGGGACACGC GCGTGACCTACCGCAGCGCGGTCGAACGCGACGACATCCGCCAGCAGGTCAACATCGATGCGAAAAGCGTCGGCGCGCTG GGATTGGAAGTGTCGTTGTATGCACGCGACGATGCGGCCGCGAACCAGCAGCTGGACGCCATCGCGCAGCACGTGCGCCA GGTCGTGCTGTGGGGCGGGTTGCGCGACTACCTGGACAGCCTGCGCCAGCAGACGCTCGAACAACGCCCGCAGTTGCAGA TCGACCAGATCCAGCAACGCTACGCGATCGAACAGAACGAACGCCAGGCTGCGGACATGCAGCAGTTGCTGGAGCGCTAT CCGGAACTGCGGCGCAACGAGGTCAACACGGTCGTGTCGGTCGGCGATGGCGGTGGACGCTACCTTTCGCCGCTGGCGCA GATCGTCGCATTGCAATCGACCATCGCCGGGACGCGGACCACCTTGCGTCAGGTGGAACGCGAGCTGGAACAGCTGGACG GCAAGCAGCGCTTTCTGGCGCGGGTGGACCAGCGCGCGCCGGGCCTGCATCTGGGCCGGGCCCTGGCAGACTGGGTGCAG AGCTGCCGACGCGCCGTCTTCGGCAGCGGCACCCCCTCCGGCTCGGCGCTGTCGCAGGTCGCCAGCGAAATAGACCTGGC GCTGTCGCAACAGCGCTGGCGCGCGCAATTGGTGCGCTACCGGGCGATCCCGGCGTTATCGCCGGCGCCGGTACCCTCGC GCCGGCCGGCGCTGGTCGCGCTGGCGGTGTTCCTTGGGGTGTTGCTGGTCGCCTCGTTGGGATTGGCAATGTATGTGATC GCGCGTCGCAATGGCGACCGGCATGCATCCTGGTCGGCGCACGCCGATCCGTTGTTTGCGTGGTTGCCGCAGCGCATGCG TGGCCTGTTGCTCGGGCCGACCGACGCGCGCCCGCTGGGGTCTGGATGA
Upstream 100 bases:
>100_bases CACCGAGGCGGTGCTGACCGCCACCTTGTGGTGCGGGCTGCGGACTGCAGGGCGCGCGCGCGCATAGTCGCGTTGCCGCC GTCGCAATCGCTGTGGCACA
Downstream 100 bases:
>100_bases TGCGGGTGCTGGTCACCGGCGCGGCCGGGATGATCGGGAGACGCGTGGCGAGCGCGCTGTTGCAGCGAGGCGACGCGGTG GCAGGCCTGGACGATCTGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 442; Mature: 442
Protein sequence:
>442_residues MLAIRRGASMPPLNRSDDLMPGIDEIPERRDEVSLGDLLLEVLRFYQQFGRLLIPLAVLCGVLAGVVVATRPLYAVTALL ETPQMSLEQWRKLQPMLADRQLVAASLASMTELPPEQRERLQRAFVLKKYWDTRVTYRSAVERDDIRQQVNIDAKSVGAL GLEVSLYARDDAAANQQLDAIAQHVRQVVLWGGLRDYLDSLRQQTLEQRPQLQIDQIQQRYAIEQNERQAADMQQLLERY PELRRNEVNTVVSVGDGGGRYLSPLAQIVALQSTIAGTRTTLRQVERELEQLDGKQRFLARVDQRAPGLHLGRALADWVQ SCRRAVFGSGTPSGSALSQVASEIDLALSQQRWRAQLVRYRAIPALSPAPVPSRRPALVALAVFLGVLLVASLGLAMYVI ARRNGDRHASWSAHADPLFAWLPQRMRGLLLGPTDARPLGSG
Sequences:
>Translated_442_residues MLAIRRGASMPPLNRSDDLMPGIDEIPERRDEVSLGDLLLEVLRFYQQFGRLLIPLAVLCGVLAGVVVATRPLYAVTALL ETPQMSLEQWRKLQPMLADRQLVAASLASMTELPPEQRERLQRAFVLKKYWDTRVTYRSAVERDDIRQQVNIDAKSVGAL GLEVSLYARDDAAANQQLDAIAQHVRQVVLWGGLRDYLDSLRQQTLEQRPQLQIDQIQQRYAIEQNERQAADMQQLLERY PELRRNEVNTVVSVGDGGGRYLSPLAQIVALQSTIAGTRTTLRQVERELEQLDGKQRFLARVDQRAPGLHLGRALADWVQ SCRRAVFGSGTPSGSALSQVASEIDLALSQQRWRAQLVRYRAIPALSPAPVPSRRPALVALAVFLGVLLVASLGLAMYVI ARRNGDRHASWSAHADPLFAWLPQRMRGLLLGPTDARPLGSG >Mature_442_residues MLAIRRGASMPPLNRSDDLMPGIDEIPERRDEVSLGDLLLEVLRFYQQFGRLLIPLAVLCGVLAGVVVATRPLYAVTALL ETPQMSLEQWRKLQPMLADRQLVAASLASMTELPPEQRERLQRAFVLKKYWDTRVTYRSAVERDDIRQQVNIDAKSVGAL GLEVSLYARDDAAANQQLDAIAQHVRQVVLWGGLRDYLDSLRQQTLEQRPQLQIDQIQQRYAIEQNERQAADMQQLLERY PELRRNEVNTVVSVGDGGGRYLSPLAQIVALQSTIAGTRTTLRQVERELEQLDGKQRFLARVDQRAPGLHLGRALADWVQ SCRRAVFGSGTPSGSALSQVASEIDLALSQQRWRAQLVRYRAIPALSPAPVPSRRPALVALAVFLGVLLVASLGLAMYVI ARRNGDRHASWSAHADPLFAWLPQRMRGLLLGPTDARPLGSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49318; Mature: 49318
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAIRRGASMPPLNRSDDLMPGIDEIPERRDEVSLGDLLLEVLRFYQQFGRLLIPLAVLC CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH GVLAGVVVATRPLYAVTALLETPQMSLEQWRKLQPMLADRQLVAASLASMTELPPEQRER HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH LQRAFVLKKYWDTRVTYRSAVERDDIRQQVNIDAKSVGALGLEVSLYARDDAAANQQLDA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEEEEECCCHHHHHHHHH IAQHVRQVVLWGGLRDYLDSLRQQTLEQRPQLQIDQIQQRYAIEQNERQAADMQQLLERY HHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH PELRRNEVNTVVSVGDGGGRYLSPLAQIVALQSTIAGTRTTLRQVERELEQLDGKQRFLA HHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH RVDQRAPGLHLGRALADWVQSCRRAVFGSGTPSGSALSQVASEIDLALSQQRWRAQLVRY HHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RAIPALSPAPVPSRRPALVALAVFLGVLLVASLGLAMYVIARRNGDRHASWSAHADPLFA HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH WLPQRMRGLLLGPTDARPLGSG HHHHHHCCEEECCCCCCCCCCC >Mature Secondary Structure MLAIRRGASMPPLNRSDDLMPGIDEIPERRDEVSLGDLLLEVLRFYQQFGRLLIPLAVLC CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH GVLAGVVVATRPLYAVTALLETPQMSLEQWRKLQPMLADRQLVAASLASMTELPPEQRER HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH LQRAFVLKKYWDTRVTYRSAVERDDIRQQVNIDAKSVGALGLEVSLYARDDAAANQQLDA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEEEEECCCHHHHHHHHH IAQHVRQVVLWGGLRDYLDSLRQQTLEQRPQLQIDQIQQRYAIEQNERQAADMQQLLERY HHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH PELRRNEVNTVVSVGDGGGRYLSPLAQIVALQSTIAGTRTTLRQVERELEQLDGKQRFLA HHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH RVDQRAPGLHLGRALADWVQSCRRAVFGSGTPSGSALSQVASEIDLALSQQRWRAQLVRY HHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RAIPALSPAPVPSRRPALVALAVFLGVLLVASLGLAMYVIARRNGDRHASWSAHADPLFA HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH WLPQRMRGLLLGPTDARPLGSG HHHHHHCCEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA