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The map label for this gene is yfgC [H]

Identifier: 21240780

GI number: 21240780

Start: 8552

End: 9358

Strand: Direct

Name: yfgC [H]

Synonym: XAC0006

Alternate gene names: 21240780

Gene position: 8552-9358 (Clockwise)

Preceding gene: 21240779

Following gene: 21240781

Centisome position: 0.17

GC content: 64.44

Gene sequence:

>807_bases
ATGAAAGCTAGGCTGTTGATCGTTGTTGCCGTGCTTGCACTGACGGCGTGTGCCACCACAACTTCGCCAACCGGCCGCCG
ACAGGTGGTGGGCGGCGTATCGCAACAGCAGTTGGACCAGTTGGGCGCGCAATCCTTCGCGCAGACCAAGGCCAAGGAAA
AAGTCAGTACCGACGGCAAGCAGAACGCCTACGTGCAGTGCGTGGTCAACGCACTGGTGGCGCAACTGCCGCCGCAATGG
CGCGAAACCAAGTGGGAAACCGCGCTGTTCGTGGACAACGAAGCCAATGCCTTCGCCCTTCCTGGCGGCAAGGTCGGCGT
CAACACCGGCATCTTTACCGTCGCCAAGACGCAGGATCAGCTCGCCGCCGTGCTCGGGCATGAAATCGGCCATGTCATTT
CGCGCCATCACGAAGAGCGCATTACCCGTCAGCTCGGCGCGCAGACGGGCCTGGGCATCATCGGCGCGCTCGCCGGTGCC
GCCTATGGCGACGGGGCGGCCAGCGCAGTCAATCAGGTCGGCGGTATGACCGCCCAGACAGTATTCCTGCTGCCGGGCTC
GCGTACCCAGGAAAGCGAAGCCGATGTGGTCGGCCAACGTCTGATGGCCCAGGCCGGATTCGATCCGGCGCAGGCGGTGA
CGCTATGGCAGAACATGATGGCCGCCAGCGGCAATCGCCAACCGCAGTGGCTGTCGACCCACCCCGATCCTGCCAACCGC
ATCCGCGAACTGCAGGCCGATGTTGCCCAGCTCGAGCCGGTGTACCAGCAGGCCAAGCAGAGCGGACGCGCACCGCGTTG
TGGCTAG

Upstream 100 bases:

>100_bases
GATCGCTCCGGCCCGGCACGCGTTATCGGCCGCGCGGAACCGTTTGACGAAAAGTTAAGACGAGCCTGCCAAAATGCCTC
CATGGTTCTAGGGGGATCGA

Downstream 100 bases:

>100_bases
AGCCACTGACGACAACCGCGCGGCTGCCGTCAACCCGTACGAACACCGATTCCCTACAACGCATGCCTGCCTACTCTGGG
ATCGCAGGCGCAACCACGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MKARLLIVVAVLALTACATTTSPTGRRQVVGGVSQQQLDQLGAQSFAQTKAKEKVSTDGKQNAYVQCVVNALVAQLPPQW
RETKWETALFVDNEANAFALPGGKVGVNTGIFTVAKTQDQLAAVLGHEIGHVISRHHEERITRQLGAQTGLGIIGALAGA
AYGDGAASAVNQVGGMTAQTVFLLPGSRTQESEADVVGQRLMAQAGFDPAQAVTLWQNMMAASGNRQPQWLSTHPDPANR
IRELQADVAQLEPVYQQAKQSGRAPRCG

Sequences:

>Translated_268_residues
MKARLLIVVAVLALTACATTTSPTGRRQVVGGVSQQQLDQLGAQSFAQTKAKEKVSTDGKQNAYVQCVVNALVAQLPPQW
RETKWETALFVDNEANAFALPGGKVGVNTGIFTVAKTQDQLAAVLGHEIGHVISRHHEERITRQLGAQTGLGIIGALAGA
AYGDGAASAVNQVGGMTAQTVFLLPGSRTQESEADVVGQRLMAQAGFDPAQAVTLWQNMMAASGNRQPQWLSTHPDPANR
IRELQADVAQLEPVYQQAKQSGRAPRCG
>Mature_268_residues
MKARLLIVVAVLALTACATTTSPTGRRQVVGGVSQQQLDQLGAQSFAQTKAKEKVSTDGKQNAYVQCVVNALVAQLPPQW
RETKWETALFVDNEANAFALPGGKVGVNTGIFTVAKTQDQLAAVLGHEIGHVISRHHEERITRQLGAQTGLGIIGALAGA
AYGDGAASAVNQVGGMTAQTVFLLPGSRTQESEADVVGQRLMAQAGFDPAQAVTLWQNMMAASGNRQPQWLSTHPDPANR
IRELQADVAQLEPVYQQAKQSGRAPRCG

Specific function: Unknown

COG id: COG0501

COG function: function code O; Zn-dependent protease with chaperone function

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI21686999, Length=160, Percent_Identity=31.25, Blast_Score=80, Evalue=2e-15,
Organism=Escherichia coli, GI1788840, Length=186, Percent_Identity=30.1075268817204, Blast_Score=81, Evalue=7e-17,
Organism=Escherichia coli, GI87082185, Length=253, Percent_Identity=26.0869565217391, Blast_Score=65, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6322940, Length=187, Percent_Identity=30.4812834224599, Blast_Score=96, Evalue=8e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 28402; Mature: 28402

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKARLLIVVAVLALTACATTTSPTGRRQVVGGVSQQQLDQLGAQSFAQTKAKEKVSTDGK
CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
QNAYVQCVVNALVAQLPPQWRETKWETALFVDNEANAFALPGGKVGVNTGIFTVAKTQDQ
CHHHHHHHHHHHHHHCCCCHHCCCCCEEEEEECCCCEEECCCCCEECCCCEEEEECCHHH
LAAVLGHEIGHVISRHHEERITRQLGAQTGLGIIGALAGAAYGDGAASAVNQVGGMTAQT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHCCCCEEE
VFLLPGSRTQESEADVVGQRLMAQAGFDPAQAVTLWQNMMAASGNRQPQWLSTHPDPANR
EEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
IRELQADVAQLEPVYQQAKQSGRAPRCG
HHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKARLLIVVAVLALTACATTTSPTGRRQVVGGVSQQQLDQLGAQSFAQTKAKEKVSTDGK
CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
QNAYVQCVVNALVAQLPPQWRETKWETALFVDNEANAFALPGGKVGVNTGIFTVAKTQDQ
CHHHHHHHHHHHHHHCCCCHHCCCCCEEEEEECCCCEEECCCCCEECCCCEEEEECCHHH
LAAVLGHEIGHVISRHHEERITRQLGAQTGLGIIGALAGAAYGDGAASAVNQVGGMTAQT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHCCCCEEE
VFLLPGSRTQESEADVVGQRLMAQAGFDPAQAVTLWQNMMAASGNRQPQWLSTHPDPANR
EEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
IRELQADVAQLEPVYQQAKQSGRAPRCG
HHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]