| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21240781
Identifier: 21240781
GI number: 21240781
Start: 9636
End: 10829
Strand: Direct
Name: 21240781
Synonym: XAC0007
Alternate gene names: NA
Gene position: 9636-10829 (Clockwise)
Preceding gene: 21240780
Following gene: 21240782
Centisome position: 0.19
GC content: 60.13
Gene sequence:
>1194_bases ATGAAACTGCTCAACCGCAAGCAAGCCCTGTTGTCCCTGTTCATCGCCGCGTCGCTGGGTGGGGCTGTCGTCACCGATGC GGTCGCGCAGTCGGACCGTTCCTCCGAACGGGCTAGCCGTAAATCCAAGAGCGGCAAGGCCGAGGAGCTGTACCCGCAGT CGACCCGCCAGGCACCGACGATCAAGCCGTCCTCGAAGTTGAGCAGCAAGCTGCAGAAGCTGATCGAAACCTTCAACAAG GGCGAGGACTACCAAGGCGTGCGCACCCAGGCCGATGAGATCCTGGCCAACAGCGCGGCGAACGACGCCGACAAGGCGCT GGCGGCCCAGCTGGCCGCGCAGGCTGCCTACAACCTGGACGACACCGCCGGTGCCAAGAAGTACCTGCAGCAGGCCATCG GCCTGAACGCGCTGGACAACAACGGCCATTTCCAGTCGATGCTGATGCTGGCGCAGTTGCAGATGCAGGACGACCAGCAG GCCGAGGGTCTGGCCACGCTGGACAAGTATCTGGAGGAGAGCAAGTCGCAACGTCCGGAAGATCTGATCCTCAAGGGCCA GGCGCTGTACCAGACCGAACGCTACAAGGAAGCCATCCCGGTGTTGAAGCAGGCCATCGCTGCCTCGCCCGAGCCCAAGG ACAGCTGGAACCAGCTGCTGATGGCGTCCTACGCCGAAGCTGGCCAGACCGGTGAAGCCGTTGCGGCCGCCGAGGCGCTG GCCGCCAAGACGCCCAACGACAAAAAGGCCCAGCTCAACCTGGCCAACATGTACATGCAGGCCGACCAGATGGACAAGGC CGCAGGCGTGATGGACAAGCTGCGTGCCTCCGGTCAGTTGACCGAAGAAAAGGAATACAAGCAGTTGTATTCCATCTACG CCAACACCGAGAACAAAGAAAAGGACGTCATCGCCGTCATCAATGAGGGTATGCAAAAAGGCATCCTCAAGCCTGATTAT CAGACATACCTTGCCCTGGCCCAGTCGTATTACTACAGCGACGATGTACCGAAGGCGATCGAAAACTGGCAGAAGGCCGC ACCGCTTTCCAAGGATGGCGAGACCTACTTGAATCTGGCCAAGGTGCTGCATTCGGAAGGTCGCATCCCGGAGGCCAAGC AGGCCGCACAGCAGGCGATCGCCAAGGGTGTTAAAAAACCCGAAGACGCCAAGAAGATCATCAACCTGAAGTAA
Upstream 100 bases:
>100_bases GGGAACTGAGACTTTCTGCTAAGTTTGCCGGCTCAGATTTTTCGTACAGCGCCCATTCCGCTTTTCGTACCGCCCGACGG CGGATCGTCCGAGGTGAAAC
Downstream 100 bases:
>100_bases AAAAAGAAAATAAACCCCCGAAATCCCTGTGTTTTTAGTGGTTACAGGCCTCGGGATTGGTATAAGCTTGGGAGTTCCTG CGGTGTCAAAGCCGTCCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MKLLNRKQALLSLFIAASLGGAVVTDAVAQSDRSSERASRKSKSGKAEELYPQSTRQAPTIKPSSKLSSKLQKLIETFNK GEDYQGVRTQADEILANSAANDADKALAAQLAAQAAYNLDDTAGAKKYLQQAIGLNALDNNGHFQSMLMLAQLQMQDDQQ AEGLATLDKYLEESKSQRPEDLILKGQALYQTERYKEAIPVLKQAIAASPEPKDSWNQLLMASYAEAGQTGEAVAAAEAL AAKTPNDKKAQLNLANMYMQADQMDKAAGVMDKLRASGQLTEEKEYKQLYSIYANTENKEKDVIAVINEGMQKGILKPDY QTYLALAQSYYYSDDVPKAIENWQKAAPLSKDGETYLNLAKVLHSEGRIPEAKQAAQQAIAKGVKKPEDAKKIINLK
Sequences:
>Translated_397_residues MKLLNRKQALLSLFIAASLGGAVVTDAVAQSDRSSERASRKSKSGKAEELYPQSTRQAPTIKPSSKLSSKLQKLIETFNK GEDYQGVRTQADEILANSAANDADKALAAQLAAQAAYNLDDTAGAKKYLQQAIGLNALDNNGHFQSMLMLAQLQMQDDQQ AEGLATLDKYLEESKSQRPEDLILKGQALYQTERYKEAIPVLKQAIAASPEPKDSWNQLLMASYAEAGQTGEAVAAAEAL AAKTPNDKKAQLNLANMYMQADQMDKAAGVMDKLRASGQLTEEKEYKQLYSIYANTENKEKDVIAVINEGMQKGILKPDY QTYLALAQSYYYSDDVPKAIENWQKAAPLSKDGETYLNLAKVLHSEGRIPEAKQAAQQAIAKGVKKPEDAKKIINLK >Mature_397_residues MKLLNRKQALLSLFIAASLGGAVVTDAVAQSDRSSERASRKSKSGKAEELYPQSTRQAPTIKPSSKLSSKLQKLIETFNK GEDYQGVRTQADEILANSAANDADKALAAQLAAQAAYNLDDTAGAKKYLQQAIGLNALDNNGHFQSMLMLAQLQMQDDQQ AEGLATLDKYLEESKSQRPEDLILKGQALYQTERYKEAIPVLKQAIAASPEPKDSWNQLLMASYAEAGQTGEAVAAAEAL AAKTPNDKKAQLNLANMYMQADQMDKAAGVMDKLRASGQLTEEKEYKQLYSIYANTENKEKDVIAVINEGMQKGILKPDY QTYLALAQSYYYSDDVPKAIENWQKAAPLSKDGETYLNLAKVLHSEGRIPEAKQAAQQAIAKGVKKPEDAKKIINLK
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43443; Mature: 43443
Theoretical pI: Translated: 7.58; Mature: 7.58
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLNRKQALLSLFIAASLGGAVVTDAVAQSDRSSERASRKSKSGKAEELYPQSTRQAPT CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHCCCCCCCCCC IKPSSKLSSKLQKLIETFNKGEDYQGVRTQADEILANSAANDADKALAAQLAAQAAYNLD CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC DTAGAKKYLQQAIGLNALDNNGHFQSMLMLAQLQMQDDQQAEGLATLDKYLEESKSQRPE CHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCH DLILKGQALYQTERYKEAIPVLKQAIAASPEPKDSWNQLLMASYAEAGQTGEAVAAAEAL HHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHH AAKTPNDKKAQLNLANMYMQADQMDKAAGVMDKLRASGQLTEEKEYKQLYSIYANTENKE HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC KDVIAVINEGMQKGILKPDYQTYLALAQSYYYSDDVPKAIENWQKAAPLSKDGETYLNLA HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHH KVLHSEGRIPEAKQAAQQAIAKGVKKPEDAKKIINLK HHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCC >Mature Secondary Structure MKLLNRKQALLSLFIAASLGGAVVTDAVAQSDRSSERASRKSKSGKAEELYPQSTRQAPT CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHCCCCCCCCCC IKPSSKLSSKLQKLIETFNKGEDYQGVRTQADEILANSAANDADKALAAQLAAQAAYNLD CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC DTAGAKKYLQQAIGLNALDNNGHFQSMLMLAQLQMQDDQQAEGLATLDKYLEESKSQRPE CHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCH DLILKGQALYQTERYKEAIPVLKQAIAASPEPKDSWNQLLMASYAEAGQTGEAVAAAEAL HHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHH AAKTPNDKKAQLNLANMYMQADQMDKAAGVMDKLRASGQLTEEKEYKQLYSIYANTENKE HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC KDVIAVINEGMQKGILKPDYQTYLALAQSYYYSDDVPKAIENWQKAAPLSKDGETYLNLA HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHH KVLHSEGRIPEAKQAAQQAIAKGVKKPEDAKKIINLK HHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA