| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is 21240779
Identifier: 21240779
GI number: 21240779
Start: 7685
End: 8368
Strand: Direct
Name: 21240779
Synonym: XAC0005
Alternate gene names: NA
Gene position: 7685-8368 (Clockwise)
Preceding gene: 21240778
Following gene: 21240780
Centisome position: 0.15
GC content: 67.98
Gene sequence:
>684_bases GTGCGTGGCTTCGGCCAGGTACAGGCGGCCAAGGCGCAGGGGCTGACCCCCTCGCCCACCGAGGTCATGGCCGCCATTGG CCAACCCGGTGTCATGGTGCAGCTGCTCACCGCGCTGGTCAGCACGGCCACGCCGGCGCTGCTGTTGTACTACTGGCGTC GCCGCGCCACCCCTGCCGAACAAACCGCTTCACGGGCTGCCGCGCGCCGCGCCTCCACCTGGGGCTGGACCGCGCTGATC GCCGCCGCCGTGTTCCTGCTGAGCAATCTGGTCAGCGTGGCGGCTTCGGCGTTGGGCATCAAGCCGGTGCCCACCAACCT GCCGTTGATGAAAGAAGCGCTCCAGCAATGGCCGCTGGCACTGACGCTGTTTGCGGTGATCATCGCGCCGGCTTACGAGG AACTGCTGTTCCGTCGCGTGCTGTTCGGGCGTCTGCTCGCTGCCGCCCGCCCGTGGCTGGGCATCGTGCTGAGCGGAGCG ATTTTCGCGCTGGTGCACGAAGTACCCGGCATCAGTGGTAACGGCCCGGCCGCGATCGCGCAGCTGTGGCTGGTGTACGG CAGCATGGGCGCGGCGTTCGCATGGCTGTACTGGCGTACCGGCACGTTGTGGGCCCCGATTGCCGCGCACGGCATCAACA ATGCCACAGCCCTGGCAGCGCTGTACTTTTTCGGGCTTGGCTGA
Upstream 100 bases:
>100_bases GCCGCTGCTGCCCGTGCTCGTGGGTTTCTGGGTCGACGTGCTTATCGCTGGCGGCCTGCTGTTGACCCTCAGCGTGGCCG GCTTTGCATTGTGGGGCGCG
Downstream 100 bases:
>100_bases GCCCCAAAAGCGGTCTCTTGCGAGAACCCAGCCGCAGCGGCGCGGCGCTTGGGCATCAAATGGATCCGCACACGTGGACA GCCGATCGCTCCGGCCCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: CAAX Amino Terminal Protease Family Protein; Transmembrane Protease
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MRGFGQVQAAKAQGLTPSPTEVMAAIGQPGVMVQLLTALVSTATPALLLYYWRRRATPAEQTASRAAARRASTWGWTALI AAAVFLLSNLVSVAASALGIKPVPTNLPLMKEALQQWPLALTLFAVIIAPAYEELLFRRVLFGRLLAAARPWLGIVLSGA IFALVHEVPGISGNGPAAIAQLWLVYGSMGAAFAWLYWRTGTLWAPIAAHGINNATALAALYFFGLG
Sequences:
>Translated_227_residues MRGFGQVQAAKAQGLTPSPTEVMAAIGQPGVMVQLLTALVSTATPALLLYYWRRRATPAEQTASRAAARRASTWGWTALI AAAVFLLSNLVSVAASALGIKPVPTNLPLMKEALQQWPLALTLFAVIIAPAYEELLFRRVLFGRLLAAARPWLGIVLSGA IFALVHEVPGISGNGPAAIAQLWLVYGSMGAAFAWLYWRTGTLWAPIAAHGINNATALAALYFFGLG >Mature_227_residues MRGFGQVQAAKAQGLTPSPTEVMAAIGQPGVMVQLLTALVSTATPALLLYYWRRRATPAEQTASRAAARRASTWGWTALI AAAVFLLSNLVSVAASALGIKPVPTNLPLMKEALQQWPLALTLFAVIIAPAYEELLFRRVLFGRLLAAARPWLGIVLSGA IFALVHEVPGISGNGPAAIAQLWLVYGSMGAAFAWLYWRTGTLWAPIAAHGINNATALAALYFFGLG
Specific function: Unknown
COG id: COG1266
COG function: function code R; Predicted metal-dependent membrane protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24080; Mature: 24080
Theoretical pI: Translated: 11.12; Mature: 11.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGFGQVQAAKAQGLTPSPTEVMAAIGQPGVMVQLLTALVSTATPALLLYYWRRRATPAE CCCCHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHH QTASRAAARRASTWGWTALIAAAVFLLSNLVSVAASALGIKPVPTNLPLMKEALQQWPLA HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHH LTLFAVIIAPAYEELLFRRVLFGRLLAAARPWLGIVLSGAIFALVHEVPGISGNGPAAIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH QLWLVYGSMGAAFAWLYWRTGTLWAPIAAHGINNATALAALYFFGLG HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHCCC >Mature Secondary Structure MRGFGQVQAAKAQGLTPSPTEVMAAIGQPGVMVQLLTALVSTATPALLLYYWRRRATPAE CCCCHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHH QTASRAAARRASTWGWTALIAAAVFLLSNLVSVAASALGIKPVPTNLPLMKEALQQWPLA HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHH LTLFAVIIAPAYEELLFRRVLFGRLLAAARPWLGIVLSGAIFALVHEVPGISGNGPAAIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH QLWLVYGSMGAAFAWLYWRTGTLWAPIAAHGINNATALAALYFFGLG HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA