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The map label for this gene is nodV [H]

Identifier: 57238515

GI number: 57238515

Start: 1565095

End: 1566306

Strand: Reverse

Name: nodV [H]

Synonym: CJE1665

Alternate gene names: 57238515

Gene position: 1566306-1565095 (Counterclockwise)

Preceding gene: 57238516

Following gene: 57238514

Centisome position: 88.1

GC content: 25.08

Gene sequence:

>1212_bases
ATGAAAGATTTTTTTAAAGATCAGTTTTTTAAAGCTCTTGAAAAAAATACAATTTTTTCAAGAGCTGATGTTCAAGGAAA
TTTAATTTTTGTCAGTGATAAACTTTGTCAAATAAGTGGATATAGTAAAAAAGAGCTTATAGGAAAAAAACATTCAATAT
TTAAACATCCAGATGTTGAGGAATGTTATATTGAAGAACTTTTAAAAAAACTTTCATATAAAAAACCTTATCAAGTTATT
TTTAAAAATATTGATAAATTAGGCAAAACTTTCTATCTTGAAACTTTATTAATCCCCATATTGGATAAAAATAATGAATT
AATAGAAATAGTAGCATTCTCTCATGATGTTAGTAATTCTTTTAAGCTTAATGAAGAGCTTGCTCTAAATCACGCTAAAT
TAAGAGAATTAAGTATTAATCTTGAAAATACAGTTAAAAATCACCAACAAGAATTTATACAGTTAGGTAAAAAATTTGAG
AAAAAAATGCAAATTGCCTTGGAAAAAAATGAAAAAGATATTAAAATAGCATATGAAGAGATTTTGAAATCTTCATTAGA
ACAAATGATTAGCGATATAGCACATCAATGGAGACAACCGTTAAATGAGCTCGGTATTGCCATGTTTCAAATGAAGCAAA
ATCTTAAAGATGAAAAAGGATTTGCTGAAATTTACTCACAATCAAAAGATATGATTAAAAATATGTCAGAAACAATTGAT
GTGTTTAGAACTTTGTTTAACAAAGGAGTAGAGCAGTGTGTATTTATAAAAGAGACTTTAAATAAAGCCTTGGAAATTGC
TTTTGAAACTATAGAAAAAAATCATGTAAATATTAATATTGTTTCGAAAAGTGATTATGAAGTTTTGGCATATGAGAATG
GTTTAATAAGAGTTTTTCTTAATTTGATTTTAAATTCAATAGAAGCATTTAAAAACAAAAAAAGGAAAATCATAACAATA
AATTTTTCAAAATTTGGAAAAAATTATCTGAAAATTACAATAAAAGATAATGCTGGTGGGATTGATAAAGAAAATTTAGA
TAAAATTTTTCAACCTTATTTTACAACAAAACATCCTAGTCAAGGTATAGGAGTAGGACTTTATATAAGTAGACAAATTA
TCGAAAGTTTCCAAGGAAAAATAAAAGTTAAAAATGGAAAAGACGGGGCTTGTTTTGAGATATTTTTAAAACTAAAAGAG
AGGGTAGAGTAG

Upstream 100 bases:

>100_bases
TTTTTAGTGATTTTTTGAAAAATTTATTTAATTATTTATCGTATGGCGTTATTGTTTGTTACGGTATAAATCTTGCCTAT
ATAGGTTTTAAGGCTTTTCA

Downstream 100 bases:

>100_bases
AAATGTCACAAGAATGTAAAGAATTGATAATATTAGTAGTTGAAGATGAGGTTAAGGCTAGAGAATCAATGATTAATATA
TTAAGCGAACGCTTTAGTAA

Product: sensory box sensor histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MKDFFKDQFFKALEKNTIFSRADVQGNLIFVSDKLCQISGYSKKELIGKKHSIFKHPDVEECYIEELLKKLSYKKPYQVI
FKNIDKLGKTFYLETLLIPILDKNNELIEIVAFSHDVSNSFKLNEELALNHAKLRELSINLENTVKNHQQEFIQLGKKFE
KKMQIALEKNEKDIKIAYEEILKSSLEQMISDIAHQWRQPLNELGIAMFQMKQNLKDEKGFAEIYSQSKDMIKNMSETID
VFRTLFNKGVEQCVFIKETLNKALEIAFETIEKNHVNINIVSKSDYEVLAYENGLIRVFLNLILNSIEAFKNKKRKIITI
NFSKFGKNYLKITIKDNAGGIDKENLDKIFQPYFTTKHPSQGIGVGLYISRQIIESFQGKIKVKNGKDGACFEIFLKLKE
RVE

Sequences:

>Translated_403_residues
MKDFFKDQFFKALEKNTIFSRADVQGNLIFVSDKLCQISGYSKKELIGKKHSIFKHPDVEECYIEELLKKLSYKKPYQVI
FKNIDKLGKTFYLETLLIPILDKNNELIEIVAFSHDVSNSFKLNEELALNHAKLRELSINLENTVKNHQQEFIQLGKKFE
KKMQIALEKNEKDIKIAYEEILKSSLEQMISDIAHQWRQPLNELGIAMFQMKQNLKDEKGFAEIYSQSKDMIKNMSETID
VFRTLFNKGVEQCVFIKETLNKALEIAFETIEKNHVNINIVSKSDYEVLAYENGLIRVFLNLILNSIEAFKNKKRKIITI
NFSKFGKNYLKITIKDNAGGIDKENLDKIFQPYFTTKHPSQGIGVGLYISRQIIESFQGKIKVKNGKDGACFEIFLKLKE
RVE
>Mature_403_residues
MKDFFKDQFFKALEKNTIFSRADVQGNLIFVSDKLCQISGYSKKELIGKKHSIFKHPDVEECYIEELLKKLSYKKPYQVI
FKNIDKLGKTFYLETLLIPILDKNNELIEIVAFSHDVSNSFKLNEELALNHAKLRELSINLENTVKNHQQEFIQLGKKFE
KKMQIALEKNEKDIKIAYEEILKSSLEQMISDIAHQWRQPLNELGIAMFQMKQNLKDEKGFAEIYSQSKDMIKNMSETID
VFRTLFNKGVEQCVFIKETLNKALEIAFETIEKNHVNINIVSKSDYEVLAYENGLIRVFLNLILNSIEAFKNKKRKIITI
NFSKFGKNYLKITIKDNAGGIDKENLDKIFQPYFTTKHPSQGIGVGLYISRQIIESFQGKIKVKNGKDGACFEIFLKLKE
RVE

Specific function: Member of the two-component regulatory system nodV/nodW probably involved in the regulation of the transcription of genes involved in the nodulation process. NodV may function as a membrane-associated protein kinase that phosphorylates nodW in response to

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 PAS (PER-ARNT-SIM) domains [H]

Homologues:

Organism=Escherichia coli, GI1790436, Length=221, Percent_Identity=26.6968325791855, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1788549, Length=384, Percent_Identity=23.9583333333333, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1790346, Length=273, Percent_Identity=24.1758241758242, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 46885; Mature: 46885

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDFFKDQFFKALEKNTIFSRADVQGNLIFVSDKLCQISGYSKKELIGKKHSIFKHPDVE
CCCHHHHHHHHHHHHCCCEEECCCCCCEEEEECCHHCCCCCCHHHHHCCHHCCCCCCCHH
ECYIEELLKKLSYKKPYQVIFKNIDKLGKTFYLETLLIPILDKNNELIEIVAFSHDVSNS
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCC
FKLNEELALNHAKLRELSINLENTVKNHQQEFIQLGKKFEKKMQIALEKNEKDIKIAYEE
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
ILKSSLEQMISDIAHQWRQPLNELGIAMFQMKQNLKDEKGFAEIYSQSKDMIKNMSETID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
VFRTLFNKGVEQCVFIKETLNKALEIAFETIEKNHVNINIVSKSDYEVLAYENGLIRVFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEECCCHHHHHH
NLILNSIEAFKNKKRKIITINFSKFGKNYLKITIKDNAGGIDKENLDKIFQPYFTTKHPS
HHHHHHHHHHHCCCCEEEEEEHHHHCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCC
QGIGVGLYISRQIIESFQGKIKVKNGKDGACFEIFLKLKERVE
CCCCCHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MKDFFKDQFFKALEKNTIFSRADVQGNLIFVSDKLCQISGYSKKELIGKKHSIFKHPDVE
CCCHHHHHHHHHHHHCCCEEECCCCCCEEEEECCHHCCCCCCHHHHHCCHHCCCCCCCHH
ECYIEELLKKLSYKKPYQVIFKNIDKLGKTFYLETLLIPILDKNNELIEIVAFSHDVSNS
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCC
FKLNEELALNHAKLRELSINLENTVKNHQQEFIQLGKKFEKKMQIALEKNEKDIKIAYEE
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
ILKSSLEQMISDIAHQWRQPLNELGIAMFQMKQNLKDEKGFAEIYSQSKDMIKNMSETID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
VFRTLFNKGVEQCVFIKETLNKALEIAFETIEKNHVNINIVSKSDYEVLAYENGLIRVFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEECCCHHHHHH
NLILNSIEAFKNKKRKIITINFSKFGKNYLKITIKDNAGGIDKENLDKIFQPYFTTKHPS
HHHHHHHHHHHCCCCEEEEEEHHHHCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCC
QGIGVGLYISRQIIESFQGKIKVKNGKDGACFEIFLKLKERVE
CCCCCHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2320582; 11157954; 12597275 [H]