Definition Campylobacter jejuni RM1221, complete genome.
Accession NC_003912
Length 1,777,831

Click here to switch to the map view.

The map label for this gene is 57238516

Identifier: 57238516

GI number: 57238516

Start: 1566303

End: 1566962

Strand: Reverse

Name: 57238516

Synonym: CJE1666

Alternate gene names: NA

Gene position: 1566962-1566303 (Counterclockwise)

Preceding gene: 57238517

Following gene: 57238515

Centisome position: 88.14

GC content: 24.24

Gene sequence:

>660_bases
GTGAGTATAGATTTTTTAGCTATTATCAGCGTTGCTTTTTTATCTAGTTTTGGACATTGCTATTCTATGTGTGGTGGTTT
TAATTTACTTTTTATAAATTTGAATTCAAAAAGCAATAATTTATTTTTATTAACTTTTATTTATCATTTGTTTAGAATTT
TTGCTTATATTGTTTTAGGGATAATTTTTGGGACTTTTGGGAATATCTTGGCAATCAATGCTAAGGTTCAAAGTTTGTCA
TTTTTTATTCTTGGTATATTTATGATGATTTTGGGTTTTGCTCTTATTTTTAGAGGCAATATGTTATCTTTTATTGAAAA
TAATGTTTTTTTTGATAGTTTTGTAAAGAAAATTATTAAAAAATCTAAAAATTTTAAAGGATTAAAATCAGCCATATTTT
TAGGATTTTCAAATGGTTTTGTTCCTTGTGGATTGGTGTATTTTTTTATAGCCAATGCAATGAGTAAGCAAAATATTTTT
GAAGGTATTTTGGTAATGATGATTTTTGGAATATCAACTTTACCTGCGATGTTATTTTTTTCTAAAATTTCACAGTTTTT
TAGTGATTTTTTGAAAAATTTATTTAATTATTTATCGTATGGCGTTATTGTTTGTTACGGTATAAATCTTGCCTATATAG
GTTTTAAGGCTTTTCAATGA

Upstream 100 bases:

>100_bases
GATATAAAGACTATCCTATTATTTCAGTACAACATCATCCAGAAAGTTCTTCAGGTCCTCATGAAAGTAAGTATATTTTT
AAAGAATTTATGAATTTGAT

Downstream 100 bases:

>100_bases
AAGATTTTTTTAAAGATCAGTTTTTTAAAGCTCTTGAAAAAAATACAATTTTTTCAAGAGCTGATGTTCAAGGAAATTTA
ATTTTTGTCAGTGATAAACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MSIDFLAIISVAFLSSFGHCYSMCGGFNLLFINLNSKSNNLFLLTFIYHLFRIFAYIVLGIIFGTFGNILAINAKVQSLS
FFILGIFMMILGFALIFRGNMLSFIENNVFFDSFVKKIIKKSKNFKGLKSAIFLGFSNGFVPCGLVYFFIANAMSKQNIF
EGILVMMIFGISTLPAMLFFSKISQFFSDFLKNLFNYLSYGVIVCYGINLAYIGFKAFQ

Sequences:

>Translated_219_residues
MSIDFLAIISVAFLSSFGHCYSMCGGFNLLFINLNSKSNNLFLLTFIYHLFRIFAYIVLGIIFGTFGNILAINAKVQSLS
FFILGIFMMILGFALIFRGNMLSFIENNVFFDSFVKKIIKKSKNFKGLKSAIFLGFSNGFVPCGLVYFFIANAMSKQNIF
EGILVMMIFGISTLPAMLFFSKISQFFSDFLKNLFNYLSYGVIVCYGINLAYIGFKAFQ
>Mature_218_residues
SIDFLAIISVAFLSSFGHCYSMCGGFNLLFINLNSKSNNLFLLTFIYHLFRIFAYIVLGIIFGTFGNILAINAKVQSLSF
FILGIFMMILGFALIFRGNMLSFIENNVFFDSFVKKIIKKSKNFKGLKSAIFLGFSNGFVPCGLVYFFIANAMSKQNIFE
GILVMMIFGISTLPAMLFFSKISQFFSDFLKNLFNYLSYGVIVCYGINLAYIGFKAFQ

Specific function: Unknown

COG id: COG2836

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24745; Mature: 24614

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIDFLAIISVAFLSSFGHCYSMCGGFNLLFINLNSKSNNLFLLTFIYHLFRIFAYIVLG
CCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHH
IIFGTFGNILAINAKVQSLSFFILGIFMMILGFALIFRGNMLSFIENNVFFDSFVKKIIK
HHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCHHHHHHHHHHHH
KSKNFKGLKSAIFLGFSNGFVPCGLVYFFIANAMSKQNIFEGILVMMIFGISTLPAMLFF
HCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SKISQFFSDFLKNLFNYLSYGVIVCYGINLAYIGFKAFQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHECCC
>Mature Secondary Structure 
SIDFLAIISVAFLSSFGHCYSMCGGFNLLFINLNSKSNNLFLLTFIYHLFRIFAYIVLG
CCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHH
IIFGTFGNILAINAKVQSLSFFILGIFMMILGFALIFRGNMLSFIENNVFFDSFVKKIIK
HHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCHHHHHHHHHHHH
KSKNFKGLKSAIFLGFSNGFVPCGLVYFFIANAMSKQNIFEGILVMMIFGISTLPAMLFF
HCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SKISQFFSDFLKNLFNYLSYGVIVCYGINLAYIGFKAFQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA