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The map label for this gene is cmoA [H]

Identifier: 57238214

GI number: 57238214

Start: 626170

End: 626877

Strand: Direct

Name: cmoA [H]

Synonym: CJE0693

Alternate gene names: 57238214

Gene position: 626170-626877 (Clockwise)

Preceding gene: 57238215

Following gene: 57238208

Centisome position: 35.22

GC content: 28.53

Gene sequence:

>708_bases
ATGAAAGATGAACTTTTTAAACAAAGCCCTAAAAAACAATTTGAATTTGATAAAAGCGTGGCTAGTGTTTTTGATGATAT
GATCAATCGTTCTGTACCATTTTATAGAGAAAATTTAGAACTTTGTGGCAATTTATTGGCTAAAATTTTACCTACAAATG
CAAGTGTTTGCGATTTGGGCTGCTCAAGTGCTAATTTTTTGATTTTTTTGGCAAATCTAAGAAAGGATTTTAAACTTTTT
GGCGTGGATAATTCTGCTTCCATGCTTGAAGTTGCAAAATCAAAAGCTAAAGCTTATGGGCTTGATATAAGTTTTTTTGA
AGCTAATTTATGCGAATTTGATTTTTTTACTTGCGATGTTTTTGTAGCAAATTATACCATGCAGTTTATTCGTCCTCCTA
AAAGACAAGAATTGCTTGATCAAATTTATAAAAATTTAAACTCTAAAGGCATTTTGATTATGAGTGAAAAAATCCTTTAT
GAAGATGCTTTTTTGTCTAAAAATATCATAGAACTTTATGCTGATTATAAAGAAAAACAAGGCTATTCTAAGTTTGAAAT
CGCAGCTAAAAGAGAAGCTTTGGAAAATGTTTTAATTCCTTATAGTCAAAAAGAAAATTTAAATATGCTAGAAAAGGCAG
GTTTTAAGAAAATAGAAAGTATTTTTAAATGGGCAAATTTTGAAACTTTCATAGCTTTTAAGGATTAG

Upstream 100 bases:

>100_bases
TCTTTTCTAAGAGAGAATCAAAAATTTCAAGATCTAAAAAAACTTAAAAATCAAATTACTAAAGATATAGAACAGGCTAG
AGAATTATTAAGGAAAAATG

Downstream 100 bases:

>100_bases
AAATATTTTCATCTTCCCATTCATCTTTTGGAAAACCTATCTTATATGCATTAACACAATCTTGACTAATGATAGCTTTG
TGTCTGCATTCTAAACTTCT

Product: methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MKDELFKQSPKKQFEFDKSVASVFDDMINRSVPFYRENLELCGNLLAKILPTNASVCDLGCSSANFLIFLANLRKDFKLF
GVDNSASMLEVAKSKAKAYGLDISFFEANLCEFDFFTCDVFVANYTMQFIRPPKRQELLDQIYKNLNSKGILIMSEKILY
EDAFLSKNIIELYADYKEKQGYSKFEIAAKREALENVLIPYSQKENLNMLEKAGFKKIESIFKWANFETFIAFKD

Sequences:

>Translated_235_residues
MKDELFKQSPKKQFEFDKSVASVFDDMINRSVPFYRENLELCGNLLAKILPTNASVCDLGCSSANFLIFLANLRKDFKLF
GVDNSASMLEVAKSKAKAYGLDISFFEANLCEFDFFTCDVFVANYTMQFIRPPKRQELLDQIYKNLNSKGILIMSEKILY
EDAFLSKNIIELYADYKEKQGYSKFEIAAKREALENVLIPYSQKENLNMLEKAGFKKIESIFKWANFETFIAFKD
>Mature_235_residues
MKDELFKQSPKKQFEFDKSVASVFDDMINRSVPFYRENLELCGNLLAKILPTNASVCDLGCSSANFLIFLANLRKDFKLF
GVDNSASMLEVAKSKAKAYGLDISFFEANLCEFDFFTCDVFVANYTMQFIRPPKRQELLDQIYKNLNSKGILIMSEKILY
EDAFLSKNIIELYADYKEKQGYSKFEIAAKREALENVLIPYSQKENLNMLEKAGFKKIESIFKWANFETFIAFKD

Specific function: Catalyzes the conversion of 5-methoxyuridine (mo5U) to uridine-5-oxyacetic acid (cmo5U) at position 34 in tRNA. May also participate in the methylation of uridine-5-oxyacetic acid (cmo5U) to uridine-5-oxyacetic acid methyl ester (mcmo5U) [H]

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. CmoA family [H]

Homologues:

Organism=Escherichia coli, GI1788177, Length=239, Percent_Identity=35.5648535564854, Blast_Score=147, Evalue=7e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013217
- InterPro:   IPR005271 [H]

Pfam domain/function: PF08242 Methyltransf_12 [H]

EC number: NA

Molecular weight: Translated: 27167; Mature: 27167

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDELFKQSPKKQFEFDKSVASVFDDMINRSVPFYRENLELCGNLLAKILPTNASVCDLG
CCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEECC
CSSANFLIFLANLRKDFKLFGVDNSASMLEVAKSKAKAYGLDISFFEANLCEFDFFTCDV
CCCCCCEEEEEHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCCHHCCHHHHHH
FVANYTMQFIRPPKRQELLDQIYKNLNSKGILIMSEKILYEDAFLSKNIIELYADYKEKQ
HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHC
GYSKFEIAAKREALENVLIPYSQKENLNMLEKAGFKKIESIFKWANFETFIAFKD
CCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECC
>Mature Secondary Structure
MKDELFKQSPKKQFEFDKSVASVFDDMINRSVPFYRENLELCGNLLAKILPTNASVCDLG
CCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEECC
CSSANFLIFLANLRKDFKLFGVDNSASMLEVAKSKAKAYGLDISFFEANLCEFDFFTCDV
CCCCCCEEEEEHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCCHHCCHHHHHH
FVANYTMQFIRPPKRQELLDQIYKNLNSKGILIMSEKILYEDAFLSKNIIELYADYKEKQ
HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHC
GYSKFEIAAKREALENVLIPYSQKENLNMLEKAGFKKIESIFKWANFETFIAFKD
CCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA