Click here to switch to the map view.

The map label for this gene is hypC [H]

Identifier: 57238181

GI number: 57238181

Start: 661178

End: 661459

Strand: Direct

Name: hypC [H]

Synonym: CJE0727

Alternate gene names: 57238181

Gene position: 661178-661459 (Clockwise)

Preceding gene: 57238182

Following gene: 57238180

Centisome position: 37.19

GC content: 31.91

Gene sequence:

>282_bases
ATGTGTTTGTCTATACCTTCTGAAATTTTAGAAATCGATGAATTAAACAATGCTTTAGTACAAACTTTAGGTGTGAAAAG
AAAAGTTAATTTGGATTTGATTGATGAGCCTTTAAAACAGGGCGATTATGTCTTAATCCATGTAGGCGTTGCTATGGAAA
AAATCGACAAAGAAGCTGCACTAGAAAGCATTAAAACCTATCAAGAAATAGTAGAAAAAATGAATAGTGGAGAGATAAAA
AGTGATGAGGGAGATTTGGGTTTAAATGAATTTCATCGATGA

Upstream 100 bases:

>100_bases
AATTAAATCCTAGAGCAGATATTATCACTCTTGATGCAAAAAATGGCACTAATATGGAGCTTTGGTATAAGGTGCTTAAA
CTTAAAAAGGAGCTTTTTTA

Downstream 100 bases:

>100_bases
ATTTAGAGATAAAGAAAGCATTTTAGCTTTAAAAAAACTTATAGAACAAGAACTTAAAAATCCTATCAATATCATGGAAA
TTTGCGGTGGGCATACGCAT

Product: hydrogenase assembly chaperone HypC/HupF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MCLSIPSEILEIDELNNALVQTLGVKRKVNLDLIDEPLKQGDYVLIHVGVAMEKIDKEAALESIKTYQEIVEKMNSGEIK
SDEGDLGLNEFHR

Sequences:

>Translated_93_residues
MCLSIPSEILEIDELNNALVQTLGVKRKVNLDLIDEPLKQGDYVLIHVGVAMEKIDKEAALESIKTYQEIVEKMNSGEIK
SDEGDLGLNEFHR
>Mature_93_residues
MCLSIPSEILEIDELNNALVQTLGVKRKVNLDLIDEPLKQGDYVLIHVGVAMEKIDKEAALESIKTYQEIVEKMNSGEIK
SDEGDLGLNEFHR

Specific function: Required for production of hydrogenase [H]

COG id: COG0298

COG function: function code O; Hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hupF/hypC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019812
- InterPro:   IPR001109 [H]

Pfam domain/function: PF01455 HupF_HypC [H]

EC number: NA

Molecular weight: Translated: 10439; Mature: 10439

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCLSIPSEILEIDELNNALVQTLGVKRKVNLDLIDEPLKQGDYVLIHVGVAMEKIDKEAA
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCEEEEEECHHHHHHHHHHH
LESIKTYQEIVEKMNSGEIKSDEGDLGLNEFHR
HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCC
>Mature Secondary Structure
MCLSIPSEILEIDELNNALVQTLGVKRKVNLDLIDEPLKQGDYVLIHVGVAMEKIDKEAA
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCEEEEEECHHHHHHHHHHH
LESIKTYQEIVEKMNSGEIKSDEGDLGLNEFHR
HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12810954 [H]