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The map label for this gene is porA [H]

Identifier: 57238131

GI number: 57238131

Start: 1309683

End: 1310978

Strand: Direct

Name: porA [H]

Synonym: CJE1395

Alternate gene names: 57238131

Gene position: 1309683-1310978 (Clockwise)

Preceding gene: 57238130

Following gene: 57238133

Centisome position: 73.67

GC content: 35.26

Gene sequence:

>1296_bases
ATGAAACTAGTTAAAATTAGTTTAGTTGCAGCTCTTGCTGCAGGTGCTTTTTCAGCAGCTAACGCTACTCCACTTGAAGA
AGCGATCAAAGATATCGATGTATCTGGAGTATTAAGATACAGATATGAAAGTAGCAATCCATGGAGCAATGCAAATTTTG
GTTCTGGTATTTCTGGAAAACAAGATCATAAATACAGAGCACAAGTTAACTTCAGCGGTGCTATATCAGACAACTTTAAA
GCTTTCGTTCAATTTGACTACAACTCACAAGATGGTGGTTATGGCACAGATAGCATCAGTAACACAAGCGATACTTTAAC
AGTTCGTCAATTATATTTAACTTATACAAATGAAGATGTTGCTACAAGCGTAATCGCTGGTAAACAACAACTAAACACTA
TCTGGACTGACAATGGTATCGATGGTTTAGTTGGAACAGGTGTTAAAGTAGTAAACAACAGCATCGATGGTTTAACTCTA
GCTGCTTTTGCAATGGATAGTTTCAATGAAGCTTCAGATACTACTGTAACAATTACTCAAGATAATAATCAAAAAATTAC
AGGAGTTCAATTTAATCGTGGAAATCCTAAAGGTGGTAGTGATGTAAGTGGTGCTTTAGATTGGAGCAAAAATATTTATG
GTGCTGCAGCTATCGGCTCTTATGATATCGCTGGTGGACAATTCAACCCACAATTATGGTTAGCTTATATGAGTGATAAT
GCATTCTTATATGCTTTAGATGCAGCTTATAGCACAACTATCTTTGATGGAATTAACTGGACTATCGAAGGTGCTTACCT
AGGAAATTCTGTAGATAATAAACTTAAAGATAGATTAGATGCAGCAAATGGTAATTTCTTTGCTTTAAGAGGCACTGTTG
AGGTAAATGGTTGGGATGCAAGTCTTGGTGGTTTATACTATGGTAAAAAAGATAAAGTTACTTTAACCACAATTGAAGAT
CAAGGTAATCTTGGCTCTTTGCTTGCAGGTGAAGAAATTTTCTATACTAATGGTTCTAATTTAAATGGCGATATTGGTAG
AAATATCTTTGGTTATGTAACTGCTGGATATACTTTTAATGAAACAGTTCGCGTTGGTGCTGACTTTGTATACGGTGGAA
CAAAAACAAATATAATTGGTCAAGGTGGTAAAAAACTTGAAGCTGTTGCAAGAGTAGATTACAAATACTCTCCAAAACTT
AACTTCTCAGCATTCTACTCTTATGTAAATGTTGATACAGATCCTGAAAGCACTCATCATGATGCTGTAAGACTTCAAGC
TCTTTACAAATTCTAA

Upstream 100 bases:

>100_bases
ATTTAAAATTTTTACTATTTTAAGTGCTTCTTAAGAAAAAACTCCAAATTTATGTGCTACAATTACGATGTTTTATTAAT
TTTTGACAAGGAGAATTCTC

Downstream 100 bases:

>100_bases
GAAGCTTTTAAGTCTAACTTCAAGGCGGGGTTTTGCTCCGCCTTTTTTTATGCCTGATTTTTAAAACTTAAATTTATATA
AAAAGATTTTCCCAAGCTAA

Product: major outer membrane protein

Products: NA

Alternate protein names: Porin [H]

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MKLVKISLVAALAAGAFSAANATPLEEAIKDIDVSGVLRYRYESSNPWSNANFGSGISGKQDHKYRAQVNFSGAISDNFK
AFVQFDYNSQDGGYGTDSISNTSDTLTVRQLYLTYTNEDVATSVIAGKQQLNTIWTDNGIDGLVGTGVKVVNNSIDGLTL
AAFAMDSFNEASDTTVTITQDNNQKITGVQFNRGNPKGGSDVSGALDWSKNIYGAAAIGSYDIAGGQFNPQLWLAYMSDN
AFLYALDAAYSTTIFDGINWTIEGAYLGNSVDNKLKDRLDAANGNFFALRGTVEVNGWDASLGGLYYGKKDKVTLTTIED
QGNLGSLLAGEEIFYTNGSNLNGDIGRNIFGYVTAGYTFNETVRVGADFVYGGTKTNIIGQGGKKLEAVARVDYKYSPKL
NFSAFYSYVNVDTDPESTHHDAVRLQALYKF

Sequences:

>Translated_431_residues
MKLVKISLVAALAAGAFSAANATPLEEAIKDIDVSGVLRYRYESSNPWSNANFGSGISGKQDHKYRAQVNFSGAISDNFK
AFVQFDYNSQDGGYGTDSISNTSDTLTVRQLYLTYTNEDVATSVIAGKQQLNTIWTDNGIDGLVGTGVKVVNNSIDGLTL
AAFAMDSFNEASDTTVTITQDNNQKITGVQFNRGNPKGGSDVSGALDWSKNIYGAAAIGSYDIAGGQFNPQLWLAYMSDN
AFLYALDAAYSTTIFDGINWTIEGAYLGNSVDNKLKDRLDAANGNFFALRGTVEVNGWDASLGGLYYGKKDKVTLTTIED
QGNLGSLLAGEEIFYTNGSNLNGDIGRNIFGYVTAGYTFNETVRVGADFVYGGTKTNIIGQGGKKLEAVARVDYKYSPKL
NFSAFYSYVNVDTDPESTHHDAVRLQALYKF
>Mature_431_residues
MKLVKISLVAALAAGAFSAANATPLEEAIKDIDVSGVLRYRYESSNPWSNANFGSGISGKQDHKYRAQVNFSGAISDNFK
AFVQFDYNSQDGGYGTDSISNTSDTLTVRQLYLTYTNEDVATSVIAGKQQLNTIWTDNGIDGLVGTGVKVVNNSIDGLTL
AAFAMDSFNEASDTTVTITQDNNQKITGVQFNRGNPKGGSDVSGALDWSKNIYGAAAIGSYDIAGGQFNPQLWLAYMSDN
AFLYALDAAYSTTIFDGINWTIEGAYLGNSVDNKLKDRLDAANGNFFALRGTVEVNGWDASLGGLYYGKKDKVTLTTIED
QGNLGSLLAGEEIFYTNGSNLNGDIGRNIFGYVTAGYTFNETVRVGADFVYGGTKTNIIGQGGKKLEAVARVDYKYSPKL
NFSAFYSYVNVDTDPESTHHDAVRLQALYKF

Specific function: Assembles to form a functional porin. May be one of the structures responsible for adhesion to intestinal cells [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008439 [H]

Pfam domain/function: PF05538 Campylo_MOMP [H]

EC number: NA

Molecular weight: Translated: 46475; Mature: 46475

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLVKISLVAALAAGAFSAANATPLEEAIKDIDVSGVLRYRYESSNPWSNANFGSGISGK
CEEEEEEHHHHHHHCCCCCCCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCC
QDHKYRAQVNFSGAISDNFKAFVQFDYNSQDGGYGTDSISNTSDTLTVRQLYLTYTNEDV
CCCEEEEEEEEEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCHH
ATSVIAGKQQLNTIWTDNGIDGLVGTGVKVVNNSIDGLTLAAFAMDSFNEASDTTVTITQ
HHHHHHCHHHHCEEECCCCCCCHHHCCEEEECCCCCCEEEEEEEHHCCCCCCCCEEEEEE
DNNQKITGVQFNRGNPKGGSDVSGALDWSKNIYGAAAIGSYDIAGGQFNPQLWLAYMSDN
CCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCEECCCCCCCCEEEEEEECCC
AFLYALDAAYSTTIFDGINWTIEGAYLGNSVDNKLKDRLDAANGNFFALRGTVEVNGWDA
EEEEEEECCCEEEEECCCCEEEEEEEECCCHHHHHHHHHHCCCCCEEEEEEEEEECCCCC
SLGGLYYGKKDKVTLTTIEDQGNLGSLLAGEEIFYTNGSNLNGDIGRNIFGYVTAGYTFN
CCCCEEECCCCCEEEEEEECCCCCCCEECCCEEEEECCCCCCCCCCCCEEEEEEECEEEC
ETVRVGADFVYGGTKTNIIGQGGKKLEAVARVDYKYSPKLNFSAFYSYVNVDTDPESTHH
CEEEECCEEEECCCEEEEEECCCCCEEEEEEECEEECCCCCHHHEEEEEECCCCCCCCCC
DAVRLQALYKF
HHEEEEEEECC
>Mature Secondary Structure
MKLVKISLVAALAAGAFSAANATPLEEAIKDIDVSGVLRYRYESSNPWSNANFGSGISGK
CEEEEEEHHHHHHHCCCCCCCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCC
QDHKYRAQVNFSGAISDNFKAFVQFDYNSQDGGYGTDSISNTSDTLTVRQLYLTYTNEDV
CCCEEEEEEEEEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCHH
ATSVIAGKQQLNTIWTDNGIDGLVGTGVKVVNNSIDGLTLAAFAMDSFNEASDTTVTITQ
HHHHHHCHHHHCEEECCCCCCCHHHCCEEEECCCCCCEEEEEEEHHCCCCCCCCEEEEEE
DNNQKITGVQFNRGNPKGGSDVSGALDWSKNIYGAAAIGSYDIAGGQFNPQLWLAYMSDN
CCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCEECCCCCCCCEEEEEEECCC
AFLYALDAAYSTTIFDGINWTIEGAYLGNSVDNKLKDRLDAANGNFFALRGTVEVNGWDA
EEEEEEECCCEEEEECCCCEEEEEEEECCCHHHHHHHHHHCCCCCEEEEEEEEEECCCCC
SLGGLYYGKKDKVTLTTIEDQGNLGSLLAGEEIFYTNGSNLNGDIGRNIFGYVTAGYTFN
CCCCEEECCCCCEEEEEEECCCCCCCEECCCEEEEECCCCCCCCCCCCEEEEEEECEEEC
ETVRVGADFVYGGTKTNIIGQGGKKLEAVARVDYKYSPKLNFSAFYSYVNVDTDPESTHH
CEEEECCEEEECCCEEEEEECCCCCEEEEEEECEEECCCCCHHHEEEEEECCCCCCCCCC
DAVRLQALYKF
HHEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10688204; 9163918; 7543469 [H]