Click here to switch to the map view.

The map label for this gene is yafK [C]

Identifier: 57237735

GI number: 57237735

Start: 923468

End: 924445

Strand: Reverse

Name: yafK [C]

Synonym: CJE0985

Alternate gene names: 57237735

Gene position: 924445-923468 (Counterclockwise)

Preceding gene: 57237740

Following gene: 57237734

Centisome position: 52.0

GC content: 28.43

Gene sequence:

>978_bases
TTGTTAAAACGAATTGCTTTATTAATTACACTTTCTTCATTGATGTTACATGCCTCAGATCTTGTTAAAATTTATCTTAA
TCAAGGGTTAGATGCTGTTGGTGTAGCGATTGAAAAAGAATTAACTCAAAAGGATTTTTGGTTAAGTGAAATAGGAGATA
AAAATATTTCACTTGGATACTATGATGATAATGTTGCTATCGTACTTACAAATAAAACAGATAAAATTCTCCGTGTTTAT
TCTTACGAGGACGGAAAAATAAGAAAAGATTTTGAACAAAAAGAAATAATAACTGGATTAATGGGCGATAAAAAAATAGA
AGGAGATTTGAAAACGCCAGTAGGTTTTTATGAGTTAGGCCGTAAGTTTAATCCAGGTGATCCTTATTATGGTCCCTTTG
CTTTTGCTACAACTTATCCAAATTTACTTGATAAAGTACAAGGAAAAACAGGTGGTGGTATTTGGATCCATGGCTATCCT
TTAGATGGTTCTAGACTTGATGAATTTAAAACAAGAGGATGTATTGCTTTATTTAATAATAATTTGGAGAAATTTGCACA
AGTTGTACAAGATAAAAAAGTTTTTGTTATGACAGAAGAAAAAGAAAAAATTAGAGCTAAAAAGGATCAAATAGCTAGTT
TATTGGCTGATCTTTTTACATGGAAACTAGCTTGGACAAATAGTGATACTAATACCTATTTAAGTTTTTATGATGAGCAA
GAATTTAAACGTTTTGATAAAATGAAATTTGAACAGTTTGCTTCCATGAAAAAATCTATTTTTTCTCGTAAAGAAGATAA
AAAGATTAAATTTTCAGATATTAATATCAGCCCTTATCCGAATTTAGAAAATGAAACTATGTATAGAATTTCATTTTATG
AGGATTATTACACTAAAAACTATCAGTTTAGAGGCGATAAAATTTTATACGTTAAGATAGATAGTAAAGGTAAAATGAAA
ATTTTAGCAGAGCAATAA

Upstream 100 bases:

>100_bases
AGGCCGCATTGTTAATATAATTAATATTTTTTAAGAAAAAAAATATTATAATCACAAACATTTTTGACTTAAAAAATTTT
GAAATACCTAAGGAAAAACA

Downstream 100 bases:

>100_bases
ATGTCTTTAATAAAAATTGATCAAAAAGCTTATGAATATAATTTAAGACATATTGCTAAAAAAATAGGGAGTTTTCAAAG
ATTAATTTGCGTTTTTAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: ErfK/YbiS/YcfS/YnhG; Periplasmic Protein; Erfk/Ybis/Ycfs/Ynhg Family Protein; 60 KDa Chaperonin (Protein Cpn; TPR Repeat-Containing Protein

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MLKRIALLITLSSLMLHASDLVKIYLNQGLDAVGVAIEKELTQKDFWLSEIGDKNISLGYYDDNVAIVLTNKTDKILRVY
SYEDGKIRKDFEQKEIITGLMGDKKIEGDLKTPVGFYELGRKFNPGDPYYGPFAFATTYPNLLDKVQGKTGGGIWIHGYP
LDGSRLDEFKTRGCIALFNNNLEKFAQVVQDKKVFVMTEEKEKIRAKKDQIASLLADLFTWKLAWTNSDTNTYLSFYDEQ
EFKRFDKMKFEQFASMKKSIFSRKEDKKIKFSDINISPYPNLENETMYRISFYEDYYTKNYQFRGDKILYVKIDSKGKMK
ILAEQ

Sequences:

>Translated_325_residues
MLKRIALLITLSSLMLHASDLVKIYLNQGLDAVGVAIEKELTQKDFWLSEIGDKNISLGYYDDNVAIVLTNKTDKILRVY
SYEDGKIRKDFEQKEIITGLMGDKKIEGDLKTPVGFYELGRKFNPGDPYYGPFAFATTYPNLLDKVQGKTGGGIWIHGYP
LDGSRLDEFKTRGCIALFNNNLEKFAQVVQDKKVFVMTEEKEKIRAKKDQIASLLADLFTWKLAWTNSDTNTYLSFYDEQ
EFKRFDKMKFEQFASMKKSIFSRKEDKKIKFSDINISPYPNLENETMYRISFYEDYYTKNYQFRGDKILYVKIDSKGKMK
ILAEQ
>Mature_325_residues
MLKRIALLITLSSLMLHASDLVKIYLNQGLDAVGVAIEKELTQKDFWLSEIGDKNISLGYYDDNVAIVLTNKTDKILRVY
SYEDGKIRKDFEQKEIITGLMGDKKIEGDLKTPVGFYELGRKFNPGDPYYGPFAFATTYPNLLDKVQGKTGGGIWIHGYP
LDGSRLDEFKTRGCIALFNNNLEKFAQVVQDKKVFVMTEEKEKIRAKKDQIASLLADLFTWKLAWTNSDTNTYLSFYDEQ
EFKRFDKMKFEQFASMKKSIFSRKEDKKIKFSDINISPYPNLENETMYRISFYEDYYTKNYQFRGDKILYVKIDSKGKMK
ILAEQ

Specific function: Unknown

COG id: COG3034

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37770; Mature: 37770

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKRIALLITLSSLMLHASDLVKIYLNQGLDAVGVAIEKELTQKDFWLSEIGDKNISLGY
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
YDDNVAIVLTNKTDKILRVYSYEDGKIRKDFEQKEIITGLMGDKKIEGDLKTPVGFYELG
ECCCEEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCEECCCCCCCCCHHHHC
RKFNPGDPYYGPFAFATTYPNLLDKVQGKTGGGIWIHGYPLDGSRLDEFKTRGCIALFNN
CCCCCCCCCCCCEEHHHCCHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHCCEEEEECC
NLEKFAQVVQDKKVFVMTEEKEKIRAKKDQIASLLADLFTWKLAWTNSDTNTYLSFYDEQ
CHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCEEEEECCHH
EFKRFDKMKFEQFASMKKSIFSRKEDKKIKFSDINISPYPNLENETMYRISFYEDYYTKN
HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEEEHHHCCC
YQFRGDKILYVKIDSKGKMKILAEQ
EEECCCEEEEEEECCCCCEEEEECC
>Mature Secondary Structure
MLKRIALLITLSSLMLHASDLVKIYLNQGLDAVGVAIEKELTQKDFWLSEIGDKNISLGY
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
YDDNVAIVLTNKTDKILRVYSYEDGKIRKDFEQKEIITGLMGDKKIEGDLKTPVGFYELG
ECCCEEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCEECCCCCCCCCHHHHC
RKFNPGDPYYGPFAFATTYPNLLDKVQGKTGGGIWIHGYPLDGSRLDEFKTRGCIALFNN
CCCCCCCCCCCCEEHHHCCHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHCCEEEEECC
NLEKFAQVVQDKKVFVMTEEKEKIRAKKDQIASLLADLFTWKLAWTNSDTNTYLSFYDEQ
CHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCEEEEECCHH
EFKRFDKMKFEQFASMKKSIFSRKEDKKIKFSDINISPYPNLENETMYRISFYEDYYTKN
HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEEEHHHCCC
YQFRGDKILYVKIDSKGKMKILAEQ
EEECCCEEEEEEECCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA