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The map label for this gene is alr [H]

Identifier: 57237734

GI number: 57237734

Start: 922481

End: 923467

Strand: Reverse

Name: alr [H]

Synonym: CJE0984

Alternate gene names: 57237734

Gene position: 923467-922481 (Counterclockwise)

Preceding gene: 57237735

Following gene: 57237733

Centisome position: 51.94

GC content: 29.48

Gene sequence:

>987_bases
ATGTCTTTAATAAAAATTGATCAAAAAGCTTATGAATATAATTTAAGACATATTGCTAAAAAAATAGGGAGTTTTCAAAG
ATTAATTTGCGTTTTTAAAGATAATGCATATGGACATGGAGCTAAGCTTTTAGCTCCATTAGCCAAAAATTTAGGAGTTT
CTTTTGTTGCTGTTAAGAGTGAAGAAGAAGCTCAAGAAATCGAAGAATTTTTTGAGAATATATTAATACTATCACATCGT
CCTCATGGTAATGAAAATTCTCGATTTATTTATGCTTTAAATGATATTTCCCAAGCAAAAAAATACAAGCAAGATATAAA
AATACATCTAAAAATAGATACAGGCATGCATCGCAATGGAATTTGTGTAGAAAATTTAGAGCATGCTATAGATCTTATTC
AAAGTAGTGATTTAAAACTTACTGGAATGTTTACACATTTTGCTAGTGCAGATGAAATGGATGGAAGTTTTTTTGTTCAA
AAAGAAAATTTTCAAAAAGCTAAAAAGATAGTAAAAAAATATTTTTCAAATTTATTATTTCATTCGCATAATTCTGCAGC
ATTATTTAGAGGGAAAATTCCCGAAGATGAATATTGTAGAGTTGGGCTTGTTCAATTTGGATATGGGGATTCAAATTTAA
AAAGAGTTTTAAGCTTGTATGCTCATAGATTAAGTCAAAGGATTTTACAAAAAGGACAGAGTATAGGATATGGAGGCATT
TTTACTGCTGCAAAGGATATGGAAGTAGCGACTTATGATTTGGGTTATGCTGATGGTCTTTTCCGATACAATGGAAAAGG
GGAGTTAGTGCTTGGAAATGGAAAAGTAATGCTTGGAAAGATGTCAATGGATAGTTTTTCTTGTGAAAATTCTGGTGAGG
AAATTTGCGTGTTTAAAGATGCTGATATTTGGGCTGATTTTTTTCATACTATTAACTATGAAATTTTAGTAAAATTAAAT
CCTAATATTCAAAGAGTTCTAGTATAA

Upstream 100 bases:

>100_bases
TGAGGATTATTACACTAAAAACTATCAGTTTAGAGGCGATAAAATTTTATACGTTAAGATAGATAGTAAAGGTAAAATGA
AAATTTTAGCAGAGCAATAA

Downstream 100 bases:

>100_bases
ATATGTTTAATATAGTTTTAGTTCACCCTAGAATACCGCAAAATACAGGTAGTATAGGTAGAATGTGCTTTAATGCTGGT
TTTAAACTTCATATTGTTAA

Product: alanine racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MSLIKIDQKAYEYNLRHIAKKIGSFQRLICVFKDNAYGHGAKLLAPLAKNLGVSFVAVKSEEEAQEIEEFFENILILSHR
PHGNENSRFIYALNDISQAKKYKQDIKIHLKIDTGMHRNGICVENLEHAIDLIQSSDLKLTGMFTHFASADEMDGSFFVQ
KENFQKAKKIVKKYFSNLLFHSHNSAALFRGKIPEDEYCRVGLVQFGYGDSNLKRVLSLYAHRLSQRILQKGQSIGYGGI
FTAAKDMEVATYDLGYADGLFRYNGKGELVLGNGKVMLGKMSMDSFSCENSGEEICVFKDADIWADFFHTINYEILVKLN
PNIQRVLV

Sequences:

>Translated_328_residues
MSLIKIDQKAYEYNLRHIAKKIGSFQRLICVFKDNAYGHGAKLLAPLAKNLGVSFVAVKSEEEAQEIEEFFENILILSHR
PHGNENSRFIYALNDISQAKKYKQDIKIHLKIDTGMHRNGICVENLEHAIDLIQSSDLKLTGMFTHFASADEMDGSFFVQ
KENFQKAKKIVKKYFSNLLFHSHNSAALFRGKIPEDEYCRVGLVQFGYGDSNLKRVLSLYAHRLSQRILQKGQSIGYGGI
FTAAKDMEVATYDLGYADGLFRYNGKGELVLGNGKVMLGKMSMDSFSCENSGEEICVFKDADIWADFFHTINYEILVKLN
PNIQRVLV
>Mature_327_residues
SLIKIDQKAYEYNLRHIAKKIGSFQRLICVFKDNAYGHGAKLLAPLAKNLGVSFVAVKSEEEAQEIEEFFENILILSHRP
HGNENSRFIYALNDISQAKKYKQDIKIHLKIDTGMHRNGICVENLEHAIDLIQSSDLKLTGMFTHFASADEMDGSFFVQK
ENFQKAKKIVKKYFSNLLFHSHNSAALFRGKIPEDEYCRVGLVQFGYGDSNLKRVLSLYAHRLSQRILQKGQSIGYGGIF
TAAKDMEVATYDLGYADGLFRYNGKGELVLGNGKVMLGKMSMDSFSCENSGEEICVFKDADIWADFFHTINYEILVKLNP
NIQRVLV

Specific function: Provides the D-alanine required for cell wall biosynthesis [H]

COG id: COG0787

COG function: function code M; Alanine racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the alanine racemase family [H]

Homologues:

Organism=Escherichia coli, GI1787439, Length=366, Percent_Identity=23.7704918032787, Blast_Score=82, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000821
- InterPro:   IPR009006
- InterPro:   IPR011079
- InterPro:   IPR001608
- InterPro:   IPR020622 [H]

Pfam domain/function: PF00842 Ala_racemase_C; PF01168 Ala_racemase_N [H]

EC number: =5.1.1.1 [H]

Molecular weight: Translated: 37219; Mature: 37088

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: PS00395 ALANINE_RACEMASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLIKIDQKAYEYNLRHIAKKIGSFQRLICVFKDNAYGHGAKLLAPLAKNLGVSFVAVKS
CCEEEECHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHCCEEEEEECC
EEEAQEIEEFFENILILSHRPHGNENSRFIYALNDISQAKKYKQDIKIHLKIDTGMHRNG
HHHHHHHHHHHHHEEEEECCCCCCCCCEEEEEECCHHHHHHHHCCEEEEEEEECCCCCCC
ICVENLEHAIDLIQSSDLKLTGMFTHFASADEMDGSFFVQKENFQKAKKIVKKYFSNLLF
CCHHHHHHHHHHHHCCCEEEEEEEHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHE
HSHNSAALFRGKIPEDEYCRVGLVQFGYGDSNLKRVLSLYAHRLSQRILQKGQSIGYGGI
ECCCCCEEEECCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE
FTAAKDMEVATYDLGYADGLFRYNGKGELVLGNGKVMLGKMSMDSFSCENSGEEICVFKD
EECCCCCEEEEEECCCCCCEEEECCCCCEEEECCEEEEEEECCCCCCCCCCCCEEEEEEC
ADIWADFFHTINYEILVKLNPNIQRVLV
CHHHHHHHHHCCEEEEEEECCCEEEECC
>Mature Secondary Structure 
SLIKIDQKAYEYNLRHIAKKIGSFQRLICVFKDNAYGHGAKLLAPLAKNLGVSFVAVKS
CEEEECHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHCCEEEEEECC
EEEAQEIEEFFENILILSHRPHGNENSRFIYALNDISQAKKYKQDIKIHLKIDTGMHRNG
HHHHHHHHHHHHHEEEEECCCCCCCCCEEEEEECCHHHHHHHHCCEEEEEEEECCCCCCC
ICVENLEHAIDLIQSSDLKLTGMFTHFASADEMDGSFFVQKENFQKAKKIVKKYFSNLLF
CCHHHHHHHHHHHHCCCEEEEEEEHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHE
HSHNSAALFRGKIPEDEYCRVGLVQFGYGDSNLKRVLSLYAHRLSQRILQKGQSIGYGGI
ECCCCCEEEECCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE
FTAAKDMEVATYDLGYADGLFRYNGKGELVLGNGKVMLGKMSMDSFSCENSGEEICVFKD
EECCCCCEEEEEECCCCCCEEEECCCCCEEEECCEEEEEEECCCCCCCCCCCCEEEEEEC
ADIWADFFHTINYEILVKLNPNIQRVLV
CHHHHHHHHHCCEEEEEEECCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA