| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is aroA [H]
Identifier: 57237724
GI number: 57237724
Start: 913014
End: 914300
Strand: Reverse
Name: aroA [H]
Synonym: CJE0974
Alternate gene names: 57237724
Gene position: 914300-913014 (Counterclockwise)
Preceding gene: 57237725
Following gene: 57237723
Centisome position: 51.43
GC content: 31.08
Gene sequence:
>1287_bases ATGAAAATTTACAAATTGCAAACCCCTGTAAATGCTATACTTGAAAATATAGCAGCAGATAAAAGCATATCTCATCGTTT TGCTATATTTTCGCTTTTAACACAAGAAGAAAATAAGGCTCAAAATTATCTCTTAGCTCAAGATACTTTAAACACTCTTG AAATTATAAAAAATCTTGGAGCTAAAATTGAACAAAAAGATTCTTGCGTCAAAATTATACCCCCTAAAGAAATTTTATCT CCAAATTGTATTTTAGACTGTGGAAATTCAGGAACTGCTATGCGTTTGATGATAGGATTTTTAGCAGGAATTTTTGGTTT TTTTGTTTTAAGTGGAGATAAGTATTTAAACAATCGTCCTATGAGAAGGATAAGCAAACCACTTACTCAAATAGGCGCTA GAATTTATGGAAGAAATGAGGCAAATTTAGCTCCACTTTGTATAGAAGGTCAAAAATTAAAAGCTTTTAATTTTAAAAGC GAAATTTCTTCGGCTCAAGTTAAAACAGCTATGATTTTATCTGCTTTTAGAGCTGATAATGTATGCACTTTTAGTGAAAT TTCTCTTAGTCGAAATCATAGTGAAAACATGCTAAAGGCTATGAAAGCTCCAATAAGGGTTAGTAATGATGGCTTAAGTC TTGAAATAAATCCTTTAAAAAAACCTTTAAAAGCTCAAAATATAATCATTCCTAATGATCCTTCTTCGGCTTTTTATTTT GTTTTAGCAGCTATTATTTTACCTAAATCTCAAATTATTTTAAAAAATATTTTGCTTAATCCTACTCGTATAGAGGCGTA TAAAATTTTGCAAAAAATGGGTGCCAAACTTGAAATGACAATAACTCAAAATGATTTTGAAACTATTGGTGAGATCAGGG TGGAGTCTAGCAAGCTTAATGGCATAGAAGTTAAAGATAATATCGCTTGGTTAATAGATGAAGCGCCTGCTTTGGCTATA GCTTTTGCTTTGGCTAAGGGTAAATCTAGTTTAATAAATGCTAAAGAATTACGCGTTAAAGAAAGCGATAGGATTGCTGT GATGGTTGAAAATCTAAAGCTTTGTGGTGTTGAAGCTAGAGAACTTGATGATGGTTTTGAAATAGAAGGTGGATGCGAAC TAAAATCTTCAAAAATTAAAAGCTATGGAGATCACCGTATTGCTATGAGTTTTGCTATTTTAGGTTTGCTTTGTGGAATC GAGATTGATGATAGTGATTGTATAAAAACTTCTTTTCCAAATTTTATAGAGATTTTATCAAATTTAGGAGCTAGGATTGA TTATTGA
Upstream 100 bases:
>100_bases TTTCTTTTAGGGATATAAATAAAACTCTAGAAGATAATCAAGTGAATGAATGTATGGATAAAATTTTAAATACTCTTAAA AATTTGGGTCTTGATTTAAG
Downstream 100 bases:
>100_bases ATTAGCAAAAAACTATGGTTTTTGTTTTGGTGTTAAAAGAGCTATTAAAAAAGCAGAACAAATAAAAGATGCTGCAACTA TAGGCCCTCTTATTCACAAT
Product: 3-phosphoshikimate 1-carboxyvinyltransferase
Products: NA
Alternate protein names: 5-enolpyruvylshikimate-3-phosphate synthase; EPSP synthase; EPSPS [H]
Number of amino acids: Translated: 428; Mature: 428
Protein sequence:
>428_residues MKIYKLQTPVNAILENIAADKSISHRFAIFSLLTQEENKAQNYLLAQDTLNTLEIIKNLGAKIEQKDSCVKIIPPKEILS PNCILDCGNSGTAMRLMIGFLAGIFGFFVLSGDKYLNNRPMRRISKPLTQIGARIYGRNEANLAPLCIEGQKLKAFNFKS EISSAQVKTAMILSAFRADNVCTFSEISLSRNHSENMLKAMKAPIRVSNDGLSLEINPLKKPLKAQNIIIPNDPSSAFYF VLAAIILPKSQIILKNILLNPTRIEAYKILQKMGAKLEMTITQNDFETIGEIRVESSKLNGIEVKDNIAWLIDEAPALAI AFALAKGKSSLINAKELRVKESDRIAVMVENLKLCGVEARELDDGFEIEGGCELKSSKIKSYGDHRIAMSFAILGLLCGI EIDDSDCIKTSFPNFIEILSNLGARIDY
Sequences:
>Translated_428_residues MKIYKLQTPVNAILENIAADKSISHRFAIFSLLTQEENKAQNYLLAQDTLNTLEIIKNLGAKIEQKDSCVKIIPPKEILS PNCILDCGNSGTAMRLMIGFLAGIFGFFVLSGDKYLNNRPMRRISKPLTQIGARIYGRNEANLAPLCIEGQKLKAFNFKS EISSAQVKTAMILSAFRADNVCTFSEISLSRNHSENMLKAMKAPIRVSNDGLSLEINPLKKPLKAQNIIIPNDPSSAFYF VLAAIILPKSQIILKNILLNPTRIEAYKILQKMGAKLEMTITQNDFETIGEIRVESSKLNGIEVKDNIAWLIDEAPALAI AFALAKGKSSLINAKELRVKESDRIAVMVENLKLCGVEARELDDGFEIEGGCELKSSKIKSYGDHRIAMSFAILGLLCGI EIDDSDCIKTSFPNFIEILSNLGARIDY >Mature_428_residues MKIYKLQTPVNAILENIAADKSISHRFAIFSLLTQEENKAQNYLLAQDTLNTLEIIKNLGAKIEQKDSCVKIIPPKEILS PNCILDCGNSGTAMRLMIGFLAGIFGFFVLSGDKYLNNRPMRRISKPLTQIGARIYGRNEANLAPLCIEGQKLKAFNFKS EISSAQVKTAMILSAFRADNVCTFSEISLSRNHSENMLKAMKAPIRVSNDGLSLEINPLKKPLKAQNIIIPNDPSSAFYF VLAAIILPKSQIILKNILLNPTRIEAYKILQKMGAKLEMTITQNDFETIGEIRVESSKLNGIEVKDNIAWLIDEAPALAI AFALAKGKSSLINAKELRVKESDRIAVMVENLKLCGVEARELDDGFEIEGGCELKSSKIKSYGDHRIAMSFAILGLLCGI EIDDSDCIKTSFPNFIEILSNLGARIDY
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; sixth step. [C]
COG id: COG0128
COG function: function code E; 5-enolpyruvylshikimate-3-phosphate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the EPSP synthase family [H]
Homologues:
Organism=Escherichia coli, GI1787137, Length=421, Percent_Identity=28.0285035629454, Blast_Score=104, Evalue=9e-24, Organism=Saccharomyces cerevisiae, GI6320332, Length=459, Percent_Identity=23.3115468409586, Blast_Score=83, Evalue=9e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001986 - InterPro: IPR006264 - InterPro: IPR023193 - InterPro: IPR013792 [H]
Pfam domain/function: PF00275 EPSP_synthase [H]
EC number: =2.5.1.19 [H]
Molecular weight: Translated: 47349; Mature: 47349
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: PS00104 EPSP_SYNTHASE_1 ; PS00885 EPSP_SYNTHASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIYKLQTPVNAILENIAADKSISHRFAIFSLLTQEENKAQNYLLAQDTLNTLEIIKNLG CEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHCEEEEHHHHHHHHHHHHHC AKIEQKDSCVKIIPPKEILSPNCILDCGNSGTAMRLMIGFLAGIFGFFVLSGDKYLNNRP CCCCCCCCEEEECCCHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCC MRRISKPLTQIGARIYGRNEANLAPLCIEGQKLKAFNFKSEISSAQVKTAMILSAFRADN HHHHHHHHHHHHHHEECCCCCCCCEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHCCC VCTFSEISLSRNHSENMLKAMKAPIRVSNDGLSLEINPLKKPLKAQNIIIPNDPSSAFYF CEEEHHHHCCCCCHHHHHHHHHCCCEECCCCCEEEECCCCCCCCCCCEEECCCCCHHHHH VLAAIILPKSQIILKNILLNPTRIEAYKILQKMGAKLEMTITQNDFETIGEIRVESSKLN HHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEEEECCCHHHHHHEEEECCCCC GIEVKDNIAWLIDEAPALAIAFALAKGKSSLINAKELRVKESDRIAVMVENLKLCGVEAR CEEEECCEEEEECCCCHHHHHHHHHCCCHHHCCHHHHEECCCCCEEEEEECHHCCCCCHH ELDDGFEIEGGCELKSSKIKSYGDHRIAMSFAILGLLCGIEIDDSDCIKTSFPNFIEILS HCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHCCCHHHHHHHH NLGARIDY HCCCCCCC >Mature Secondary Structure MKIYKLQTPVNAILENIAADKSISHRFAIFSLLTQEENKAQNYLLAQDTLNTLEIIKNLG CEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHCEEEEHHHHHHHHHHHHHC AKIEQKDSCVKIIPPKEILSPNCILDCGNSGTAMRLMIGFLAGIFGFFVLSGDKYLNNRP CCCCCCCCEEEECCCHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCC MRRISKPLTQIGARIYGRNEANLAPLCIEGQKLKAFNFKSEISSAQVKTAMILSAFRADN HHHHHHHHHHHHHHEECCCCCCCCEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHCCC VCTFSEISLSRNHSENMLKAMKAPIRVSNDGLSLEINPLKKPLKAQNIIIPNDPSSAFYF CEEEHHHHCCCCCHHHHHHHHHCCCEECCCCCEEEECCCCCCCCCCCEEECCCCCHHHHH VLAAIILPKSQIILKNILLNPTRIEAYKILQKMGAKLEMTITQNDFETIGEIRVESSKLN HHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEEEECCCHHHHHHEEEECCCCC GIEVKDNIAWLIDEAPALAIAFALAKGKSSLINAKELRVKESDRIAVMVENLKLCGVEAR CEEEECCEEEEECCCCHHHHHHHHHCCCHHHCCHHHHEECCCCCEEEEEECHHCCCCCHH ELDDGFEIEGGCELKSSKIKSYGDHRIAMSFAILGLLCGIEIDDSDCIKTSFPNFIEILS HCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHCCCHHHHHHHH NLGARIDY HCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8973316 [H]