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The map label for this gene is ygiC [H]

Identifier: 57237427

GI number: 57237427

Start: 377703

End: 378872

Strand: Direct

Name: ygiC [H]

Synonym: CJE0421

Alternate gene names: 57237427

Gene position: 377703-378872 (Clockwise)

Preceding gene: 57237426

Following gene: 57237428

Centisome position: 21.25

GC content: 31.88

Gene sequence:

>1170_bases
ATGCAATTATTACAAGTAGACAAACTTCAAAAAGATTATTTAGAAAATATAGGTTTTTCTTGGCATACAGATGAAGATGG
AAGTGATTATATTAGCAATAAGTTAGTTTGTGTTAAGGAAAGTGAAGCTAATGCTTATTATGAAGCGGTAAATGAGCTTT
ATGATATGTTTATTGCTGCAGCGCAAGAAGTGATTAATAATGATCGTTTTGATGAGCTTGGAATTCCTTTTAATCTTATT
GATGCGATTAAGATGAGTTGGGAAAATGAGGTTCATTGGCATTTATATGGGCGTTTTGATTTAGCGGGTGGACTTGATGG
CAAGCCTATAAAACTTATAGAATTTAATGCTGATACCCCTACTGCTCTTTTTGAAAGTGCGATTTTACAATGGGCACTTT
TAAAACAAAATGGAATGGATGAAAGCGCACAATTTAACAGCATTTATGAAAGTTTGATGGATAATTTTAAAAGACTTATT
ACCCTTGATGAAAGTGTTGAAGGGTTTGAAGAGCATTATCAAGGATGGAAAATTCTTTTTTCAAGTGTTGCAGGAAGTAA
AGAAGAGGAAATCACTACAAAATTGCTTGCACATATAGCCAATGAAGCAGGTTTTCAAACTAATTTTTCCTTTGTAGATG
AGGTAGAATTTAGTGAAGAAGGAATTTTTAAAGAGGGTGAAAATTATGAGTATTGGTTTAAGCTTATTCCTTGGGAAGAT
ATAGCCATAGAAGAGGGTGAACTTGCTATGCTTTTAACTCAAATCATGCGTAATCAAAGAGCAATTATTTTAAATCCTGC
TTATACGCTTTTATTTCAATCTAAGGGAATTTTAAAAATTCTATGGGAACTTTATCCAAATCATCCATTACTTTTAGAAA
CAAAAGATACTCCTTTAGAAGGTAAAAACTATGTTAAAAAACCTGTTTTTGGTAGAGAAGGTGCAAATATCAGTATAATT
AAAGATGGAAAAACTTTGCATGAGAATGTAGGTCCTTATGGGAATAATAAGGCTATTTATCAAGAATATGTAGAGTTTAA
TTCATGTGAAAACGAATACTATCAAGCAGGTGTTTTCTTTGCTTATGAAGGGTGTGGCTTAGGATTTAGAAAAGGAGGAC
TTGTGCTTGATAATTATTCTAAATTTGTAGGACATATTATAAAGGATTAG

Upstream 100 bases:

>100_bases
CACAACAAGCTCTGCTTCAAGTGCTAAAAAATCAGGTTTTTTTGGTGGAGGCTCTAAAGCCACAAGTTCTAGTTCTTCTT
TTGGCTCTTAAGGATAAATA

Downstream 100 bases:

>100_bases
AAATGAAAATTGTTTGTTTAGATGCGGCAACTTTAGGGGATTATGATTTAAGTGTTTTTGAAAAATTTGGTTCTTTGCAA
ATTTATACCACAACAAATAA

Product: glutathionylspermidine synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MQLLQVDKLQKDYLENIGFSWHTDEDGSDYISNKLVCVKESEANAYYEAVNELYDMFIAAAQEVINNDRFDELGIPFNLI
DAIKMSWENEVHWHLYGRFDLAGGLDGKPIKLIEFNADTPTALFESAILQWALLKQNGMDESAQFNSIYESLMDNFKRLI
TLDESVEGFEEHYQGWKILFSSVAGSKEEEITTKLLAHIANEAGFQTNFSFVDEVEFSEEGIFKEGENYEYWFKLIPWED
IAIEEGELAMLLTQIMRNQRAIILNPAYTLLFQSKGILKILWELYPNHPLLLETKDTPLEGKNYVKKPVFGREGANISII
KDGKTLHENVGPYGNNKAIYQEYVEFNSCENEYYQAGVFFAYEGCGLGFRKGGLVLDNYSKFVGHIIKD

Sequences:

>Translated_389_residues
MQLLQVDKLQKDYLENIGFSWHTDEDGSDYISNKLVCVKESEANAYYEAVNELYDMFIAAAQEVINNDRFDELGIPFNLI
DAIKMSWENEVHWHLYGRFDLAGGLDGKPIKLIEFNADTPTALFESAILQWALLKQNGMDESAQFNSIYESLMDNFKRLI
TLDESVEGFEEHYQGWKILFSSVAGSKEEEITTKLLAHIANEAGFQTNFSFVDEVEFSEEGIFKEGENYEYWFKLIPWED
IAIEEGELAMLLTQIMRNQRAIILNPAYTLLFQSKGILKILWELYPNHPLLLETKDTPLEGKNYVKKPVFGREGANISII
KDGKTLHENVGPYGNNKAIYQEYVEFNSCENEYYQAGVFFAYEGCGLGFRKGGLVLDNYSKFVGHIIKD
>Mature_389_residues
MQLLQVDKLQKDYLENIGFSWHTDEDGSDYISNKLVCVKESEANAYYEAVNELYDMFIAAAQEVINNDRFDELGIPFNLI
DAIKMSWENEVHWHLYGRFDLAGGLDGKPIKLIEFNADTPTALFESAILQWALLKQNGMDESAQFNSIYESLMDNFKRLI
TLDESVEGFEEHYQGWKILFSSVAGSKEEEITTKLLAHIANEAGFQTNFSFVDEVEFSEEGIFKEGENYEYWFKLIPWED
IAIEEGELAMLLTQIMRNQRAIILNPAYTLLFQSKGILKILWELYPNHPLLLETKDTPLEGKNYVKKPVFGREGANISII
KDGKTLHENVGPYGNNKAIYQEYVEFNSCENEYYQAGVFFAYEGCGLGFRKGGLVLDNYSKFVGHIIKD

Specific function: Unknown

COG id: COG0754

COG function: function code E; Glutathionylspermidine synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To the N-terminal of E.coli gsp and to E.coli yjfC [H]

Homologues:

Organism=Escherichia coli, GI1789416, Length=383, Percent_Identity=31.0704960835509, Blast_Score=162, Evalue=5e-41,
Organism=Escherichia coli, GI1790629, Length=353, Percent_Identity=28.328611898017, Blast_Score=137, Evalue=9e-34,
Organism=Escherichia coli, GI1789361, Length=351, Percent_Identity=24.7863247863248, Blast_Score=92, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005494
- InterPro:   IPR016185 [H]

Pfam domain/function: PF03738 GSP_synth [H]

EC number: NA

Molecular weight: Translated: 44661; Mature: 44661

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLLQVDKLQKDYLENIGFSWHTDEDGSDYISNKLVCVKESEANAYYEAVNELYDMFIAA
CCCCHHHHHHHHHHHHCCCEECCCCCCCHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHH
AQEVINNDRFDELGIPFNLIDAIKMSWENEVHWHLYGRFDLAGGLDGKPIKLIEFNADTP
HHHHHCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCCEEEEEECCCCC
TALFESAILQWALLKQNGMDESAQFNSIYESLMDNFKRLITLDESVEGFEEHYQGWKILF
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHH
SSVAGSKEEEITTKLLAHIANEAGFQTNFSFVDEVEFSEEGIFKEGENYEYWFKLIPWED
HHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCEEEEEEECCCC
IAIEEGELAMLLTQIMRNQRAIILNPAYTLLFQSKGILKILWELYPNHPLLLETKDTPLE
CEECCCHHHHHHHHHHCCCCEEEECCCEEEEECCCCHHHHHHHHCCCCCEEEECCCCCCC
GKNYVKKPVFGREGANISIIKDGKTLHENVGPYGNNKAIYQEYVEFNSCENEYYQAGVFF
CCCHHCCCCCCCCCCEEEEEECCCHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHCCCEEE
AYEGCGLGFRKGGLVLDNYSKFVGHIIKD
EEECCCCCCCCCCEEEECHHHHHHHHHCC
>Mature Secondary Structure
MQLLQVDKLQKDYLENIGFSWHTDEDGSDYISNKLVCVKESEANAYYEAVNELYDMFIAA
CCCCHHHHHHHHHHHHCCCEECCCCCCCHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHH
AQEVINNDRFDELGIPFNLIDAIKMSWENEVHWHLYGRFDLAGGLDGKPIKLIEFNADTP
HHHHHCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCCEEEEEECCCCC
TALFESAILQWALLKQNGMDESAQFNSIYESLMDNFKRLITLDESVEGFEEHYQGWKILF
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHH
SSVAGSKEEEITTKLLAHIANEAGFQTNFSFVDEVEFSEEGIFKEGENYEYWFKLIPWED
HHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCEEEEEEECCCC
IAIEEGELAMLLTQIMRNQRAIILNPAYTLLFQSKGILKILWELYPNHPLLLETKDTPLE
CEECCCHHHHHHHHHHCCCCEEEECCCEEEEECCCCHHHHHHHHCCCCCEEEECCCCCCC
GKNYVKKPVFGREGANISIIKDGKTLHENVGPYGNNKAIYQEYVEFNSCENEYYQAGVFF
CCCHHCCCCCCCCCCEEEEEECCCHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHCCCEEE
AYEGCGLGFRKGGLVLDNYSKFVGHIIKD
EEECCCCCCCCCCEEEECHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]