| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57237426
Identifier: 57237426
GI number: 57237426
Start: 377088
End: 377693
Strand: Direct
Name: 57237426
Synonym: CJE0420
Alternate gene names: NA
Gene position: 377088-377693 (Clockwise)
Preceding gene: 57237425
Following gene: 57237427
Centisome position: 21.21
GC content: 35.15
Gene sequence:
>606_bases ATGAAAAAAATCAAAAAAATCATTCAAATTGGTATGATAGGTGGTTTAGCAGCTGTTGCTGGAGGTGCTTTAGCAGGTTG TGGAAGTAATAATGACAATGCAGATACTTTAAATCAAGCAGCTAATGCTCAAGGAGCTTTTGTAATTATCGAAGAAACAG CTCCAGGGCAGTATAAAATCAAAGATCAATATCCAAGTGATGAAACAAGGGTAGTTTTAAAAGATCTTAATGGTACAGAA AGAATTTTATCCAAAGAAGAAATGGATGCTTTGATTAAAGAAGAAGCAGCTAAAATTGATAATGGAACTTCAAATTTAAC TAAAGACAATGGACAAATCAGTAGTGGGGGATTGAGTTTAGGGGAAACTTTACTCGCAAGTGCTGCAGGTGCTATTTTAG GAAGTTGGATAGGTTCAAAACTTTTCAATAATCAAAATTTTGCCAACCAACAACGCGGTGCTTTTTCAAATCAAAGTGCT TATCAAAGGAGTGTTAATAGTTTTAATAAAGCAGGCACAACAAGCTCTGCTTCAAGTGCTAAAAAATCAGGTTTTTTTGG TGGAGGCTCTAAAGCCACAAGTTCTAGTTCTTCTTTTGGCTCTTAA
Upstream 100 bases:
>100_bases TTTTTTATATCTACAAACTTCATTTGGTATTAAATTAAAAAGTATTTATTATTTTTTGTTAAAATTTCTAATTTAAATTT TCTGTTTTTAGGATAAACTT
Downstream 100 bases:
>100_bases GGATAAATAATGCAATTATTACAAGTAGACAAACTTCAAAAAGATTATTTAGAAAATATAGGTTTTTCTTGGCATACAGA TGAAGATGGAAGTGATTATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MKKIKKIIQIGMIGGLAAVAGGALAGCGSNNDNADTLNQAANAQGAFVIIEETAPGQYKIKDQYPSDETRVVLKDLNGTE RILSKEEMDALIKEEAAKIDNGTSNLTKDNGQISSGGLSLGETLLASAAGAILGSWIGSKLFNNQNFANQQRGAFSNQSA YQRSVNSFNKAGTTSSASSAKKSGFFGGGSKATSSSSSFGS
Sequences:
>Translated_201_residues MKKIKKIIQIGMIGGLAAVAGGALAGCGSNNDNADTLNQAANAQGAFVIIEETAPGQYKIKDQYPSDETRVVLKDLNGTE RILSKEEMDALIKEEAAKIDNGTSNLTKDNGQISSGGLSLGETLLASAAGAILGSWIGSKLFNNQNFANQQRGAFSNQSA YQRSVNSFNKAGTTSSASSAKKSGFFGGGSKATSSSSSFGS >Mature_201_residues MKKIKKIIQIGMIGGLAAVAGGALAGCGSNNDNADTLNQAANAQGAFVIIEETAPGQYKIKDQYPSDETRVVLKDLNGTE RILSKEEMDALIKEEAAKIDNGTSNLTKDNGQISSGGLSLGETLLASAAGAILGSWIGSKLFNNQNFANQQRGAFSNQSA YQRSVNSFNKAGTTSSASSAKKSGFFGGGSKATSSSSSFGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0323 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y347_CAMJ8 (A8FKF9)
Other databases:
- EMBL: CP000814 - RefSeq: YP_001481923.1 - STRING: A8FKF9 - GeneID: 5617233 - GenomeReviews: CP000814_GR - KEGG: cju:C8J_0347 - eggNOG: NOG12635 - HOGENOM: HBG320656 - OMA: YKSPQAY - ProtClustDB: PRK04081 - BioCyc: CJEJ407148:C8J_0347-MONOMER - HAMAP: MF_01421 - InterPro: IPR020913
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20698; Mature: 20698
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIKKIIQIGMIGGLAAVAGGALAGCGSNNDNADTLNQAANAQGAFVIIEETAPGQYKI CHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCEEE KDQYPSDETRVVLKDLNGTERILSKEEMDALIKEEAAKIDNGTSNLTKDNGQISSGGLSL CCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHH GETLLASAAGAILGSWIGSKLFNNQNFANQQRGAFSNQSAYQRSVNSFNKAGTTSSASSA HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHH KKSGFFGGGSKATSSSSSFGS HHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKKIKKIIQIGMIGGLAAVAGGALAGCGSNNDNADTLNQAANAQGAFVIIEETAPGQYKI CHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCEEE KDQYPSDETRVVLKDLNGTERILSKEEMDALIKEEAAKIDNGTSNLTKDNGQISSGGLSL CCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHH GETLLASAAGAILGSWIGSKLFNNQNFANQQRGAFSNQSAYQRSVNSFNKAGTTSSASSA HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHH KKSGFFGGGSKATSSSSSFGS HHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA