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The map label for this gene is tonB [H]

Identifier: 57237186

GI number: 57237186

Start: 175232

End: 175978

Strand: Direct

Name: tonB [H]

Synonym: CJE0174

Alternate gene names: 57237186

Gene position: 175232-175978 (Clockwise)

Preceding gene: 57237185

Following gene: 57237187

Centisome position: 9.86

GC content: 30.39

Gene sequence:

>747_bases
ATGAAGTCTAGTGTGATTTTTGGGTTTGTGTTAAGTTTGATATTGCATACTTTAGTATTAATGTTTTTCCTTTTTTCTTT
TTATACTCAAGAAAAATCAAGTGGTGTTGATTTTAAACAAGGAGCGGAATTTACTTCCATTATGATGGTATCAGAGCTTC
CTATCGGGGAATTAAAAGAAGTTTCGATTGATCAAAAAAAGAGTAATTCTCAAGATAAAAACAAAAAACAAGACGAAAGA
ATAAGTCTTAATTCTCAAGATAAAAATGCTGTATTAAAAGTTCAAAAAAAGATTGAAAAGCAAGATGAAAACCAAGCTCA
AAAAGAAATAGCTAATGCAAGTGAAAATTCAAAATTTAAAAATGAATCGCTCAGTGCTCCGCTACAAAGTAATGAAGATA
AAACACAAACTATAGTAAGTGGCAATGCCAAAGAACAAGTTAAAAGCTATCAAGCTTTGCTTATGGCTCATTTGACTAAA
TTTAAAAAATATCCTCAAGAAGCGATAATGCAAAAACAAGAAGGCGTTGTAAGAATTCGCGTAAGCATTGATGAAAGCGG
AAATGTCTTAAGCAAAGAGCTTAAAAAATCTTGCCCTTATGCAGCGCTCAATGATGAAGCTTTAAGTTTATTTAAAAGAG
CTTCTCCATTGCCAAAACCGCCTAAAGAAATGTTAAAAAATGGTGATAAAATCAGTTTTGTTATGCCTATTGATTACAAT
ATTAAAGACTATTTAGGTAAAAAATAA

Upstream 100 bases:

>100_bases
GATAAAAGTGTAAAGTATGAAGATATTATGCAAGTAATGCAAAAATTAAAAGAGAATGGCTATGGAAAAATAGCTCTTTC
AAGTAAAAAGATGGATTAGT

Downstream 100 bases:

>100_bases
ACTTTTCATTAAAAAAAGTTTATTAGAATTTTTATTTTAAAGGTGATGATTATGTTCTCTTCGTTTTTTAAAAGTAAAAA
ATGGGCTTTATGGGCTTATT

Product: TonB-dependent colicin receptor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MKSSVIFGFVLSLILHTLVLMFFLFSFYTQEKSSGVDFKQGAEFTSIMMVSELPIGELKEVSIDQKKSNSQDKNKKQDER
ISLNSQDKNAVLKVQKKIEKQDENQAQKEIANASENSKFKNESLSAPLQSNEDKTQTIVSGNAKEQVKSYQALLMAHLTK
FKKYPQEAIMQKQEGVVRIRVSIDESGNVLSKELKKSCPYAALNDEALSLFKRASPLPKPPKEMLKNGDKISFVMPIDYN
IKDYLGKK

Sequences:

>Translated_248_residues
MKSSVIFGFVLSLILHTLVLMFFLFSFYTQEKSSGVDFKQGAEFTSIMMVSELPIGELKEVSIDQKKSNSQDKNKKQDER
ISLNSQDKNAVLKVQKKIEKQDENQAQKEIANASENSKFKNESLSAPLQSNEDKTQTIVSGNAKEQVKSYQALLMAHLTK
FKKYPQEAIMQKQEGVVRIRVSIDESGNVLSKELKKSCPYAALNDEALSLFKRASPLPKPPKEMLKNGDKISFVMPIDYN
IKDYLGKK
>Mature_248_residues
MKSSVIFGFVLSLILHTLVLMFFLFSFYTQEKSSGVDFKQGAEFTSIMMVSELPIGELKEVSIDQKKSNSQDKNKKQDER
ISLNSQDKNAVLKVQKKIEKQDENQAQKEIANASENSKFKNESLSAPLQSNEDKTQTIVSGNAKEQVKSYQALLMAHLTK
FKKYPQEAIMQKQEGVVRIRVSIDESGNVLSKELKKSCPYAALNDEALSLFKRASPLPKPPKEMLKNGDKISFVMPIDYN
IKDYLGKK

Specific function: Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requirin

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006260 [H]

Pfam domain/function: PF03544 TonB [H]

EC number: NA

Molecular weight: Translated: 28039; Mature: 28039

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSSVIFGFVLSLILHTLVLMFFLFSFYTQEKSSGVDFKQGAEFTSIMMVSELPIGELKE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHCCCCCCHHH
VSIDQKKSNSQDKNKKQDERISLNSQDKNAVLKVQKKIEKQDENQAQKEIANASENSKFK
CCCCHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHC
NESLSAPLQSNEDKTQTIVSGNAKEQVKSYQALLMAHLTKFKKYPQEAIMQKQEGVVRIR
CHHCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCEEEEE
VSIDESGNVLSKELKKSCPYAALNDEALSLFKRASPLPKPPKEMLKNGDKISFVMPIDYN
EEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHHCCCCEEEEEECCCC
IKDYLGKK
HHHHCCCC
>Mature Secondary Structure
MKSSVIFGFVLSLILHTLVLMFFLFSFYTQEKSSGVDFKQGAEFTSIMMVSELPIGELKE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHCCCCCCHHH
VSIDQKKSNSQDKNKKQDERISLNSQDKNAVLKVQKKIEKQDENQAQKEIANASENSKFK
CCCCHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHC
NESLSAPLQSNEDKTQTIVSGNAKEQVKSYQALLMAHLTKFKKYPQEAIMQKQEGVVRIR
CHHCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCEEEEE
VSIDESGNVLSKELKKSCPYAALNDEALSLFKRASPLPKPPKEMLKNGDKISFVMPIDYN
EEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHHCCCCEEEEEECCCC
IKDYLGKK
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8437515 [H]