| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
Click here to switch to the map view.
The map label for this gene is pyrG [H]
Identifier: 57236939
GI number: 57236939
Start: 32513
End: 34144
Strand: Direct
Name: pyrG [H]
Synonym: CJE0027
Alternate gene names: 57236939
Gene position: 32513-34144 (Clockwise)
Preceding gene: 57236936
Following gene: 57236940
Centisome position: 1.83
GC content: 34.56
Gene sequence:
>1632_bases ATGAAACAAACAAAATATATTTTTGTAACAGGTGGAGTTTTAAGTTCTTTGGGTAAAGGGATAGCCGCTGCTTCTATCGC AACACTTTTAAAAAATTCAGGGCTTAAAGTGAGTATTTTAAAAGCTGATCCTTATATCAATGTTGATCCAGGCACTATGA GTCCTTTTGAGCATGGAGAGGTTTTTGTAACTGATGATGGAGCAGAAACGGATCTTGATTTGGGGCATTATGAGCGTTTT TTGGATGAGAGTTTATCTCAAGATAATAACTTCACTACAGGACGGGTTTATCAAAGTGTGATTGAAAAAGAAAGGCGTGG AGAATATCTTGGCAAAACCATTCAAGTTATCCCTCATATAGTAGGAGAAATCAAAGATCGCATTAAAAAAGCAGGAGAAG GCAAAGATATACTTATCGTTGAAATAGGCGGAACTGTTGGGGATATAGAAGGCTTGCCTTTTTTAGAAGCTATTCGTGCT TTGCGTTTGGAAGTGGGTAAAAATAATGCTATGAATATTCATCTTACTCTAGTACCTTTTATTAAGGCTGCAGGGGAATT AAAAACAAAGCCAACTCAACATAGTGTAGGCGAGTTAAGGCGCATAGGCATTAGTCCTGATATGATTATTTGTCGTAGTG AAAAAGCTCTTGATAGAGATTTAAAAGATAAAATTGCTATTTCTTGCGGGGTGGAAAAAAATTGCGTGATAGAAAGTGTT GATGCGGCTAGTATTTATCAAATTCCACTTAATTTTTTAAAGCAAGATATTTTAAGCCCTATTGCTGAAATTTTGGATTT GAAAAATTTAAAACCTAATATGGAAAATTGGGACTCTTTGGTAAAAAGAGTTATAGCTCCAAGCAATGAAGTTAAAATCG CTTTTGTAGGCAAATATGTGGATTTAAAAGAAAGTTATAAAAGCCTTACTGAAGCTATTATACACGCAGGTGCAGCCCTA GATACTAAAGTGGAGTTAAAATGGGTAGATAGTGAAAAACTTGAAAATATGGAAAGTTCTGAAGTATTTAAAGATGTGAG TGGAATTTTGGTTGCTGGGGGATTTGGATATCGTGGTGTAGAAGGTAAGATAAAAGCCATTCAATACGCAAGAGAAAATA AAATTCCTTTTTTAGGAATTTGTTTAGGTATGCAGCTTGCTTTGGTGGAATTTGCTAGAAATGTATTAAAACTTAAAGAT GCAAATTCAAGTGAATTTAATGAAAAATGCCAAAATCCTGTGGTTTATTTGATTGATGAATTTATGGATACAAATGGAGA AAAACAAATTCGTACTGCAAAAACTCCTTTAGGTGGAACTATGCGTTTAGGGGCTTATAAATGTGATATCAAGGAAAAAT CCCTTTTGGCTAAGGTTTATAATGAAGTAAAGAGTGTAAAAGAACGCCATCGTCATCGCTATGAAGCAAATCCAAAATAT AGAGCAGATTTTGAAAAACACGGTTTGATTGTAAGTGGTGAAAGCAAAGGATTGATTGAAGCAGTTGAGCTTAACTGTCA TCCTTTTTTCTTGGCTGTGCAGTTTCATCCAGAATTTACATCAAGACTTGAGCATGTTAATCCTGTGATTTGCAGTTTTA TCAAGGCAGCTATAAACTATGAAGATAATTAA
Upstream 100 bases:
>100_bases AAAATATTTTTTGTAATTCTTGCATTTTTTACTTAAAATTCTAATGAAATAAAAAGTTTTATCAAGCTATAATTAGATAA AAAAATAAGGCTTATTATCA
Downstream 100 bases:
>100_bases TAAAAATGAAATTAAAAAAATTTTGGCTTCACGCTTTGAAAAAGATTTGCATACCAAACTTTGTGATCTGCCTTTGCCAT GCTGTTTAAAGGATGCATAT
Product: CTP synthetase
Products: NA
Alternate protein names: CTP synthetase; UTP--ammonia ligase [H]
Number of amino acids: Translated: 543; Mature: 543
Protein sequence:
>543_residues MKQTKYIFVTGGVLSSLGKGIAAASIATLLKNSGLKVSILKADPYINVDPGTMSPFEHGEVFVTDDGAETDLDLGHYERF LDESLSQDNNFTTGRVYQSVIEKERRGEYLGKTIQVIPHIVGEIKDRIKKAGEGKDILIVEIGGTVGDIEGLPFLEAIRA LRLEVGKNNAMNIHLTLVPFIKAAGELKTKPTQHSVGELRRIGISPDMIICRSEKALDRDLKDKIAISCGVEKNCVIESV DAASIYQIPLNFLKQDILSPIAEILDLKNLKPNMENWDSLVKRVIAPSNEVKIAFVGKYVDLKESYKSLTEAIIHAGAAL DTKVELKWVDSEKLENMESSEVFKDVSGILVAGGFGYRGVEGKIKAIQYARENKIPFLGICLGMQLALVEFARNVLKLKD ANSSEFNEKCQNPVVYLIDEFMDTNGEKQIRTAKTPLGGTMRLGAYKCDIKEKSLLAKVYNEVKSVKERHRHRYEANPKY RADFEKHGLIVSGESKGLIEAVELNCHPFFLAVQFHPEFTSRLEHVNPVICSFIKAAINYEDN
Sequences:
>Translated_543_residues MKQTKYIFVTGGVLSSLGKGIAAASIATLLKNSGLKVSILKADPYINVDPGTMSPFEHGEVFVTDDGAETDLDLGHYERF LDESLSQDNNFTTGRVYQSVIEKERRGEYLGKTIQVIPHIVGEIKDRIKKAGEGKDILIVEIGGTVGDIEGLPFLEAIRA LRLEVGKNNAMNIHLTLVPFIKAAGELKTKPTQHSVGELRRIGISPDMIICRSEKALDRDLKDKIAISCGVEKNCVIESV DAASIYQIPLNFLKQDILSPIAEILDLKNLKPNMENWDSLVKRVIAPSNEVKIAFVGKYVDLKESYKSLTEAIIHAGAAL DTKVELKWVDSEKLENMESSEVFKDVSGILVAGGFGYRGVEGKIKAIQYARENKIPFLGICLGMQLALVEFARNVLKLKD ANSSEFNEKCQNPVVYLIDEFMDTNGEKQIRTAKTPLGGTMRLGAYKCDIKEKSLLAKVYNEVKSVKERHRHRYEANPKY RADFEKHGLIVSGESKGLIEAVELNCHPFFLAVQFHPEFTSRLEHVNPVICSFIKAAINYEDN >Mature_543_residues MKQTKYIFVTGGVLSSLGKGIAAASIATLLKNSGLKVSILKADPYINVDPGTMSPFEHGEVFVTDDGAETDLDLGHYERF LDESLSQDNNFTTGRVYQSVIEKERRGEYLGKTIQVIPHIVGEIKDRIKKAGEGKDILIVEIGGTVGDIEGLPFLEAIRA LRLEVGKNNAMNIHLTLVPFIKAAGELKTKPTQHSVGELRRIGISPDMIICRSEKALDRDLKDKIAISCGVEKNCVIESV DAASIYQIPLNFLKQDILSPIAEILDLKNLKPNMENWDSLVKRVIAPSNEVKIAFVGKYVDLKESYKSLTEAIIHAGAAL DTKVELKWVDSEKLENMESSEVFKDVSGILVAGGFGYRGVEGKIKAIQYARENKIPFLGICLGMQLALVEFARNVLKLKD ANSSEFNEKCQNPVVYLIDEFMDTNGEKQIRTAKTPLGGTMRLGAYKCDIKEKSLLAKVYNEVKSVKERHRHRYEANPKY RADFEKHGLIVSGESKGLIEAVELNCHPFFLAVQFHPEFTSRLEHVNPVICSFIKAAINYEDN
Specific function: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen [H]
COG id: COG0504
COG function: function code F; CTP synthase (UTP-ammonia lyase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Homo sapiens, GI148491070, Length=558, Percent_Identity=45.5197132616487, Blast_Score=487, Evalue=1e-137, Organism=Homo sapiens, GI28559085, Length=560, Percent_Identity=45.5357142857143, Blast_Score=478, Evalue=1e-135, Organism=Homo sapiens, GI28559083, Length=560, Percent_Identity=45.5357142857143, Blast_Score=478, Evalue=1e-135, Organism=Homo sapiens, GI221316689, Length=560, Percent_Identity=45.5357142857143, Blast_Score=478, Evalue=1e-135, Organism=Escherichia coli, GI1789142, Length=540, Percent_Identity=52.7777777777778, Blast_Score=569, Evalue=1e-163, Organism=Caenorhabditis elegans, GI25148299, Length=611, Percent_Identity=40.0981996726678, Blast_Score=428, Evalue=1e-120, Organism=Saccharomyces cerevisiae, GI6322563, Length=571, Percent_Identity=43.7828371278459, Blast_Score=462, Evalue=1e-131, Organism=Saccharomyces cerevisiae, GI6319432, Length=554, Percent_Identity=43.3212996389892, Blast_Score=450, Evalue=1e-127, Organism=Drosophila melanogaster, GI24664469, Length=559, Percent_Identity=47.0483005366726, Blast_Score=485, Evalue=1e-137, Organism=Drosophila melanogaster, GI21357815, Length=504, Percent_Identity=45.2380952380952, Blast_Score=410, Evalue=1e-114,
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004468 - InterPro: IPR017456 - InterPro: IPR017926 - InterPro: IPR000991 [H]
Pfam domain/function: PF06418 CTP_synth_N; PF00117 GATase [H]
EC number: =6.3.4.2 [H]
Molecular weight: Translated: 60347; Mature: 60347
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQTKYIFVTGGVLSSLGKGIAAASIATLLKNSGLKVSILKADPYINVDPGTMSPFEHGE CCCCEEEEEECHHHHHHCCHHHHHHHHHHHHCCCCEEEEEECCCEEECCCCCCCCCCCCE VFVTDDGAETDLDLGHYERFLDESLSQDNNFTTGRVYQSVIEKERRGEYLGKTIQVIPHI EEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGEIKDRIKKAGEGKDILIVEIGGTVGDIEGLPFLEAIRALRLEVGKNNAMNIHLTLVPF HHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEHH IKAAGELKTKPTQHSVGELRRIGISPDMIICRSEKALDRDLKDKIAISCGVEKNCVIESV HHHCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCHHHCCCHHHHEEEECCCCCCCEEECC DAASIYQIPLNFLKQDILSPIAEILDLKNLKPNMENWDSLVKRVIAPSNEVKIAFVGKYV CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEEECHH DLKESYKSLTEAIIHAGAALDTKVELKWVDSEKLENMESSEVFKDVSGILVAGGFGYRGV HHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHCCHHHHHHHHHCCEEEECCCCCCCC EGKIKAIQYARENKIPFLGICLGMQLALVEFARNVLKLKDANSSEFNEKCQNPVVYLIDE CCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEEHH FMDTNGEKQIRTAKTPLGGTMRLGAYKCDIKEKSLLAKVYNEVKSVKERHRHRYEANPKY HHCCCCCCEEEECCCCCCCCEEECEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC RADFEKHGLIVSGESKGLIEAVELNCHPFFLAVQFHPEFTSRLEHVNPVICSFIKAAINY CCCHHHCCEEEECCCCCCEEEEEECCCEEEEEEEECCHHHHHHHHCCHHHHHHHHHHHCC EDN CCC >Mature Secondary Structure MKQTKYIFVTGGVLSSLGKGIAAASIATLLKNSGLKVSILKADPYINVDPGTMSPFEHGE CCCCEEEEEECHHHHHHCCHHHHHHHHHHHHCCCCEEEEEECCCEEECCCCCCCCCCCCE VFVTDDGAETDLDLGHYERFLDESLSQDNNFTTGRVYQSVIEKERRGEYLGKTIQVIPHI EEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGEIKDRIKKAGEGKDILIVEIGGTVGDIEGLPFLEAIRALRLEVGKNNAMNIHLTLVPF HHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEHH IKAAGELKTKPTQHSVGELRRIGISPDMIICRSEKALDRDLKDKIAISCGVEKNCVIESV HHHCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCHHHCCCHHHHEEEECCCCCCCEEECC DAASIYQIPLNFLKQDILSPIAEILDLKNLKPNMENWDSLVKRVIAPSNEVKIAFVGKYV CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEEECHH DLKESYKSLTEAIIHAGAALDTKVELKWVDSEKLENMESSEVFKDVSGILVAGGFGYRGV HHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHCCHHHHHHHHHCCEEEECCCCCCCC EGKIKAIQYARENKIPFLGICLGMQLALVEFARNVLKLKDANSSEFNEKCQNPVVYLIDE CCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEEHH FMDTNGEKQIRTAKTPLGGTMRLGAYKCDIKEKSLLAKVYNEVKSVKERHRHRYEANPKY HHCCCCCCEEEECCCCCCCCEEECEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC RADFEKHGLIVSGESKGLIEAVELNCHPFFLAVQFHPEFTSRLEHVNPVICSFIKAAINY CCCHHHCCEEEECCCCCCEEEEEECCCEEEEEEEECCHHHHHHHHCCHHHHHHHHHHHCC EDN CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA