| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57236908
Identifier: 57236908
GI number: 57236908
Start: 1769923
End: 1770567
Strand: Reverse
Name: 57236908
Synonym: CJE1891
Alternate gene names: NA
Gene position: 1770567-1769923 (Counterclockwise)
Preceding gene: 57236909
Following gene: 57236906
Centisome position: 99.59
GC content: 28.06
Gene sequence:
>645_bases ATGAATAAAAAATTATTAAGCATTATCGCAAGTGCTACTTTGTTTTCAAATTTGGCTTTAGCAGATGAGAATTCTGGTTT TTTTATAGGTGCTGATGCAGCTTGGATGCATGCTCAAGTAAAAAGTGAGTTAAAACATAAGAATACAAAGCAAAATTTTA ATGGAGATATTTCAGGTAATATACCATCGTTTGGTCTAAAACTTGGATATCGTCTAAATGAAAATCATAGAATTTATGCT GGTTATAATTATTCTGATGAATTTAGTGATTTTATCAAAACTCCTAAAATTCAAATCGAAGGTGATTTTACTACACATAA ATTTTTAACAGGTTATGATTTTACTCCTAAGCTTTTTGAAAAAACCAGAGCTGTTTTAGGTGTGTATGGAGGATATGCAA GAACAGATCTTACCTTAAAAACAAGCTTTTTATCTTTGTCGCAAAATTTTGACGGTTATTTTTATGGAGCGAAAATAGGT GCTTTATATGATTTGACATCACATAATGAAATAGAATTAGGCTTTAAAGCAGAGCAAATTCATTATAATTCTAGAAATTT TTATCAAAATAAAGTGGGTTCAAACTTTTACGATCCTAAACAAACAAATTATGGTGTATATTTAGGATATAATTATAAAT TTTAA
Upstream 100 bases:
>100_bases TTAAGTATTTTATAAAAAATTCTTATTTAATCTTTGAAGAATATATAATATAAAAAGATCTAAATTTTTTAGATCGAATT TTATTATAAGGAGTTAGGTT
Downstream 100 bases:
>100_bases TCTAATGCAAGTTTTTATAACTTGCATTAATGAAATCAACCTCCACCGATAAAGTATTTTTCAACATCATCAAGTAGTTT TTCACAAATTTGAGAATCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MNKKLLSIIASATLFSNLALADENSGFFIGADAAWMHAQVKSELKHKNTKQNFNGDISGNIPSFGLKLGYRLNENHRIYA GYNYSDEFSDFIKTPKIQIEGDFTTHKFLTGYDFTPKLFEKTRAVLGVYGGYARTDLTLKTSFLSLSQNFDGYFYGAKIG ALYDLTSHNEIELGFKAEQIHYNSRNFYQNKVGSNFYDPKQTNYGVYLGYNYKF
Sequences:
>Translated_214_residues MNKKLLSIIASATLFSNLALADENSGFFIGADAAWMHAQVKSELKHKNTKQNFNGDISGNIPSFGLKLGYRLNENHRIYA GYNYSDEFSDFIKTPKIQIEGDFTTHKFLTGYDFTPKLFEKTRAVLGVYGGYARTDLTLKTSFLSLSQNFDGYFYGAKIG ALYDLTSHNEIELGFKAEQIHYNSRNFYQNKVGSNFYDPKQTNYGVYLGYNYKF >Mature_214_residues MNKKLLSIIASATLFSNLALADENSGFFIGADAAWMHAQVKSELKHKNTKQNFNGDISGNIPSFGLKLGYRLNENHRIYA GYNYSDEFSDFIKTPKIQIEGDFTTHKFLTGYDFTPKLFEKTRAVLGVYGGYARTDLTLKTSFLSLSQNFDGYFYGAKIG ALYDLTSHNEIELGFKAEQIHYNSRNFYQNKVGSNFYDPKQTNYGVYLGYNYKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24385; Mature: 24385
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKKLLSIIASATLFSNLALADENSGFFIGADAAWMHAQVKSELKHKNTKQNFNGDISGN CCHHHHHHHHHHHHHHHEEEEECCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCC IPSFGLKLGYRLNENHRIYAGYNYSDEFSDFIKTPKIQIEGDFTTHKFLTGYDFTPKLFE CCCEEEEEEEEECCCCEEEEECCCCHHHHHHHCCCEEEEECCCCEEEEEECCCCCHHHHH KTRAVLGVYGGYARTDLTLKTSFLSLSQNFDGYFYGAKIGALYDLTSHNEIELGFKAEQI HHHHHHHHCCCCEEEEEEEEEEEEECCCCCCCEEEEEEEEEEEECCCCCEEEECEEEEEE HYNSRNFYQNKVGSNFYDPKQTNYGVYLGYNYKF EECCCCHHHHHCCCCCCCCCCCCCEEEEEEEECC >Mature Secondary Structure MNKKLLSIIASATLFSNLALADENSGFFIGADAAWMHAQVKSELKHKNTKQNFNGDISGN CCHHHHHHHHHHHHHHHEEEEECCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCC IPSFGLKLGYRLNENHRIYAGYNYSDEFSDFIKTPKIQIEGDFTTHKFLTGYDFTPKLFE CCCEEEEEEEEECCCCEEEEECCCCHHHHHHHCCCEEEEECCCCEEEEEECCCCCHHHHH KTRAVLGVYGGYARTDLTLKTSFLSLSQNFDGYFYGAKIGALYDLTSHNEIELGFKAEQI HHHHHHHHCCCCEEEEEEEEEEEEECCCCCCCEEEEEEEEEEEECCCCCEEEECEEEEEE HYNSRNFYQNKVGSNFYDPKQTNYGVYLGYNYKF EECCCCHHHHHCCCCCCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA