| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228783
Identifier: 21228783
GI number: 21228783
Start: 3205365
End: 3205646
Strand: Reverse
Name: 21228783
Synonym: MM_2681
Alternate gene names: NA
Gene position: 3205646-3205365 (Counterclockwise)
Preceding gene: 21228788
Following gene: 21228782
Centisome position: 78.26
GC content: 32.62
Gene sequence:
>282_bases GTGATTTACATGGTTCAAGTTGATATAAGCGATGATACAAACCAGATTCTGGGTATTGTAAAAACTAAATTTAACCTGAA GGATGAAAGCGCAGCTATTGATTTTATAGTTGCTCAATGCGAAATAGATATGCTAGAACCCGAATTAAAACCTGAATTTA TAGAGGAAATGCAAAATATAATTGCAGGAAAACATATAGGGCCCTTTAAAACTGTTGATGATTTAAAAGCATACATAGAA AGTTTGCCTGATGAGGAAGAGGATGAATTGTGTATGAAATAA
Upstream 100 bases:
>100_bases TAATCTTACCCGTTTTCCAAGATATTGAAAGAATTTCATTGTAGATAAAGTTGATTTGCGATTGCCGACAATATATTTAT GTCAAACATCCAATCTATAT
Downstream 100 bases:
>100_bases TAATCAGTGAAAAACTTTCAAAAAAACTAATAAAATTAAGGAAAAAGAATATTTTACAATTTAATGCTATTTTTAAAAAA GCAGAAGAAATCCAGATTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 93; Mature: 93
Protein sequence:
>93_residues MIYMVQVDISDDTNQILGIVKTKFNLKDESAAIDFIVAQCEIDMLEPELKPEFIEEMQNIIAGKHIGPFKTVDDLKAYIE SLPDEEEDELCMK
Sequences:
>Translated_93_residues MIYMVQVDISDDTNQILGIVKTKFNLKDESAAIDFIVAQCEIDMLEPELKPEFIEEMQNIIAGKHIGPFKTVDDLKAYIE SLPDEEEDELCMK >Mature_93_residues MIYMVQVDISDDTNQILGIVKTKFNLKDESAAIDFIVAQCEIDMLEPELKPEFIEEMQNIIAGKHIGPFKTVDDLKAYIE SLPDEEEDELCMK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10638; Mature: 10638
Theoretical pI: Translated: 3.88; Mature: 3.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYMVQVDISDDTNQILGIVKTKFNLKDESAAIDFIVAQCEIDMLEPELKPEFIEEMQNI CEEEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHEEEEHCCCCCCCCHHHHHHHHHH IAGKHIGPFKTVDDLKAYIESLPDEEEDELCMK HCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MIYMVQVDISDDTNQILGIVKTKFNLKDESAAIDFIVAQCEIDMLEPELKPEFIEEMQNI CEEEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHEEEEHCCCCCCCCHHHHHHHHHH IAGKHIGPFKTVDDLKAYIESLPDEEEDELCMK HCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA