| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228782
Identifier: 21228782
GI number: 21228782
Start: 3205117
End: 3205377
Strand: Reverse
Name: 21228782
Synonym: MM_2680
Alternate gene names: NA
Gene position: 3205377-3205117 (Counterclockwise)
Preceding gene: 21228783
Following gene: 21228779
Centisome position: 78.25
GC content: 27.2
Gene sequence:
>261_bases GTGTATGAAATAATAATCAGTGAAAAACTTTCAAAAAAACTAATAAAATTAAGGAAAAAGAATATTTTACAATTTAATGC TATTTTTAAAAAAGCAGAAGAAATCCAGATTGACCCACAGAGGTATAAAAACCTAAGATATCCATTAAACAATCTTAAGC GTGTACATATTGATTCTCATTTCGTGCTACTTTACTCTGTTGATGAAGAAACAAAAACAATAATATTAGAAGATTTCATC CATCACGACTTCGCTTACTAA
Upstream 100 bases:
>100_bases TGCAAAATATAATTGCAGGAAAACATATAGGGCCCTTTAAAACTGTTGATGATTTAAAAGCATACATAGAAAGTTTGCCT GATGAGGAAGAGGATGAATT
Downstream 100 bases:
>100_bases TCTGACGAAAGGTGTTTAAAGTCGAAGACTTCTTTTACAAAGTTATTCAATAGATTTAATAAAGTCGTCCACAAGTAAAT GGGTTATGAATATTGCTGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 86; Mature: 86
Protein sequence:
>86_residues MYEIIISEKLSKKLIKLRKKNILQFNAIFKKAEEIQIDPQRYKNLRYPLNNLKRVHIDSHFVLLYSVDEETKTIILEDFI HHDFAY
Sequences:
>Translated_86_residues MYEIIISEKLSKKLIKLRKKNILQFNAIFKKAEEIQIDPQRYKNLRYPLNNLKRVHIDSHFVLLYSVDEETKTIILEDFI HHDFAY >Mature_86_residues MYEIIISEKLSKKLIKLRKKNILQFNAIFKKAEEIQIDPQRYKNLRYPLNNLKRVHIDSHFVLLYSVDEETKTIILEDFI HHDFAY
Specific function: Unknown
COG id: COG2026
COG function: function code JD; Cytotoxic translational repressor of toxin-antitoxin stability system
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ1173 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10463; Mature: 10463
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYEIIISEKLSKKLIKLRKKNILQFNAIFKKAEEIQIDPQRYKNLRYPLNNLKRVHIDSH CEEEEEHHHHHHHHHHHHHHCHHHHHHHHHHHHHCEECHHHHCCCCCCCCCCEEEEECCE FVLLYSVDEETKTIILEDFIHHDFAY EEEEEEECCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MYEIIISEKLSKKLIKLRKKNILQFNAIFKKAEEIQIDPQRYKNLRYPLNNLKRVHIDSH CEEEEEHHHHHHHHHHHHHHCHHHHHHHHHHHHHCEECHHHHCCCCCCCCCCEEEEECCE FVLLYSVDEETKTIILEDFIHHDFAY EEEEEEECCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12125824 [H]