| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228788
Identifier: 21228788
GI number: 21228788
Start: 3210237
End: 3210641
Strand: Reverse
Name: 21228788
Synonym: MM_2686
Alternate gene names: NA
Gene position: 3210641-3210237 (Counterclockwise)
Preceding gene: 21228789
Following gene: 21228783
Centisome position: 78.38
GC content: 34.57
Gene sequence:
>405_bases ATGAACATCACAAAGCAGAGAGCATTTCCTACAATTCCTAACAAGAATATAAGTGTTCCTATTGGCTCGATCCTTGCTGT CCAACTTTTTTATGAAAAGCTTAACTTCTGTGACATTTTTGGCAAATATAAAAGCAAAGGTCTTGATCTCAATAGTTTAC TAATTGGTTTGTTAAGCTACAAATTGACTGAGAATTTCAGTATCAAAGAAGCTGGCAAATGGTTAAATCAGGAAGAGGTT CTTGATATCTTAAATCTTGAAAGGTTTCATGAAAGAGTTCTTTACAGAACTCTTGAACTTTTAGGACGTAACAGAGAGGA AATTCTCTCTGATATTCTGGATTGTCAATGGCGGTTTAATTTTCTCCACTTTGGTCGGTTTAAATTTCCCCACCTTCAGA TATAA
Upstream 100 bases:
>100_bases AGTTCATTTTTAGATATTGTGCTCCTCTCAAAACCTGATTTAACCTGACTTTGACAGTTAGATAAAAATAAGTGCTCTCT GTTTTATGTTCTTTGGTCAA
Downstream 100 bases:
>100_bases ATTTTACTCAATTTATCATAAACTCACTCAAAATTACTGATAGATATTTACCGTTTTTATACCCTGTTTTTTCCTTTCTT TCAGCCTGTAACTTTCCCCT
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MNITKQRAFPTIPNKNISVPIGSILAVQLFYEKLNFCDIFGKYKSKGLDLNSLLIGLLSYKLTENFSIKEAGKWLNQEEV LDILNLERFHERVLYRTLELLGRNREEILSDILDCQWRFNFLHFGRFKFPHLQI
Sequences:
>Translated_134_residues MNITKQRAFPTIPNKNISVPIGSILAVQLFYEKLNFCDIFGKYKSKGLDLNSLLIGLLSYKLTENFSIKEAGKWLNQEEV LDILNLERFHERVLYRTLELLGRNREEILSDILDCQWRFNFLHFGRFKFPHLQI >Mature_134_residues MNITKQRAFPTIPNKNISVPIGSILAVQLFYEKLNFCDIFGKYKSKGLDLNSLLIGLLSYKLTENFSIKEAGKWLNQEEV LDILNLERFHERVLYRTLELLGRNREEILSDILDCQWRFNFLHFGRFKFPHLQI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15850; Mature: 15850
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNITKQRAFPTIPNKNISVPIGSILAVQLFYEKLNFCDIFGKYKSKGLDLNSLLIGLLSY CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH KLTENFSIKEAGKWLNQEEVLDILNLERFHERVLYRTLELLGRNREEILSDILDCQWRFN HHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH FLHFGRFKFPHLQI HHCCCCCCCCCCCC >Mature Secondary Structure MNITKQRAFPTIPNKNISVPIGSILAVQLFYEKLNFCDIFGKYKSKGLDLNSLLIGLLSY CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH KLTENFSIKEAGKWLNQEEVLDILNLERFHERVLYRTLELLGRNREEILSDILDCQWRFN HHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH FLHFGRFKFPHLQI HHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA