Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228788

Identifier: 21228788

GI number: 21228788

Start: 3210237

End: 3210641

Strand: Reverse

Name: 21228788

Synonym: MM_2686

Alternate gene names: NA

Gene position: 3210641-3210237 (Counterclockwise)

Preceding gene: 21228789

Following gene: 21228783

Centisome position: 78.38

GC content: 34.57

Gene sequence:

>405_bases
ATGAACATCACAAAGCAGAGAGCATTTCCTACAATTCCTAACAAGAATATAAGTGTTCCTATTGGCTCGATCCTTGCTGT
CCAACTTTTTTATGAAAAGCTTAACTTCTGTGACATTTTTGGCAAATATAAAAGCAAAGGTCTTGATCTCAATAGTTTAC
TAATTGGTTTGTTAAGCTACAAATTGACTGAGAATTTCAGTATCAAAGAAGCTGGCAAATGGTTAAATCAGGAAGAGGTT
CTTGATATCTTAAATCTTGAAAGGTTTCATGAAAGAGTTCTTTACAGAACTCTTGAACTTTTAGGACGTAACAGAGAGGA
AATTCTCTCTGATATTCTGGATTGTCAATGGCGGTTTAATTTTCTCCACTTTGGTCGGTTTAAATTTCCCCACCTTCAGA
TATAA

Upstream 100 bases:

>100_bases
AGTTCATTTTTAGATATTGTGCTCCTCTCAAAACCTGATTTAACCTGACTTTGACAGTTAGATAAAAATAAGTGCTCTCT
GTTTTATGTTCTTTGGTCAA

Downstream 100 bases:

>100_bases
ATTTTACTCAATTTATCATAAACTCACTCAAAATTACTGATAGATATTTACCGTTTTTATACCCTGTTTTTTCCTTTCTT
TCAGCCTGTAACTTTCCCCT

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MNITKQRAFPTIPNKNISVPIGSILAVQLFYEKLNFCDIFGKYKSKGLDLNSLLIGLLSYKLTENFSIKEAGKWLNQEEV
LDILNLERFHERVLYRTLELLGRNREEILSDILDCQWRFNFLHFGRFKFPHLQI

Sequences:

>Translated_134_residues
MNITKQRAFPTIPNKNISVPIGSILAVQLFYEKLNFCDIFGKYKSKGLDLNSLLIGLLSYKLTENFSIKEAGKWLNQEEV
LDILNLERFHERVLYRTLELLGRNREEILSDILDCQWRFNFLHFGRFKFPHLQI
>Mature_134_residues
MNITKQRAFPTIPNKNISVPIGSILAVQLFYEKLNFCDIFGKYKSKGLDLNSLLIGLLSYKLTENFSIKEAGKWLNQEEV
LDILNLERFHERVLYRTLELLGRNREEILSDILDCQWRFNFLHFGRFKFPHLQI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15850; Mature: 15850

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNITKQRAFPTIPNKNISVPIGSILAVQLFYEKLNFCDIFGKYKSKGLDLNSLLIGLLSY
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
KLTENFSIKEAGKWLNQEEVLDILNLERFHERVLYRTLELLGRNREEILSDILDCQWRFN
HHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
FLHFGRFKFPHLQI
HHCCCCCCCCCCCC
>Mature Secondary Structure
MNITKQRAFPTIPNKNISVPIGSILAVQLFYEKLNFCDIFGKYKSKGLDLNSLLIGLLSY
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
KLTENFSIKEAGKWLNQEEVLDILNLERFHERVLYRTLELLGRNREEILSDILDCQWRFN
HHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
FLHFGRFKFPHLQI
HHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA